Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsY3551G0101406600.01 | OGI:01109280 | 50/50 | Os XI-1B: Y3551 | Y3551 | SICAU | Chr01:37960283-37969958 | ||||||||
| Gene Symbol | - | ||||||||||
| Mutant | - | ||||||||||
| Stuctural Variations | CN1_Y3551_OTH0136160,125619_Y3551_TRA0144280,02428_Y3551_DEL0154470,02428_Y3551_OTH0154480,G46_Y3551_TRA0140690,Azucena_Y3551_DEL0153170,Azucena_Y3551_OTH0153180,Kosh_Y3551_DEL0155200,Kosh_Y3551_OTH0155210,R9311_Y3551_OTH0134480,KY131_Y3551_DEL0155450,KY131_Y3551_OTH0155460,Nipponbare_Y3551_DEL0154340,Nipponbare_Y3551_OTH0154350,HZ_Y3551_DEL0130670,132278_Y3551_TRA0111310,132278_Y3551_DEL0156430,Tumba_Y3551_OTH0129600,Basmati1_Y3551_DEL0147280,Basmati1_Y3551_OTH0147290,NamRoo_Y3551_DEL0156710,NamRoo_Y3551_OTH0156720,127652_Y3551_OTH0143500,ZH11_Y3551_DEL0155560,ZH11_Y3551_OTH0155570,LK638S_Y3551_TRA0139910,D62_Y3551_DEL0126400,FS32_Y3551_OTH0135350,DHX2_Y3551_DEL0155900,DHX2_Y3551_OTH0155910,127564_Y3551_DEL0132420,ZS97RS3_Y3551_OTH0140720,117425_Y3551_DEL0148960,117425_Y3551_OTH0148970,OglaRS2_Y3551_OTH0157460,117534_Y3551_OTH0146800,YX1_Y3551_OTH0132700,DG_Y3551_OTH0135740,S548_Y3551_DEL0126360,TM_Y3551_TRA0132780,G8_Y3551_OTH0129670,WSSM_Y3551_DEL0128430,II32_Y3551_OTH0137990,XL628S_Y3551_TRA0144340,LJ_Y3551_DEL0155190,LJ_Y3551_OTH0155200,128077_Y3551_DEL0151180,128077_Y3551_OTH0151190,
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| DNA seq | CCTAGAAGCCTTTTCAAACACAATGGGCTCATCTGTTTTTCTTCTGTAAGATATAAGCTTTATCGTGCCAAAATGTAAATATTAACACAAGAAGAGATCCTATTAAAACTGGAGTTAAAAGAAAAAAAAAACAGAACGATAGATATGCATTGCCAAAAAAGCTTGCTAAAGGCGACACATTGGCCCTTCCAAGTCTCAATAATAAGAAATGTTCCAGACCATTTGTTTTCTTTCCCCCAATCTACTTTTCCTTTTCTTTTCCTGTACAATGGGAAACAATTCAGATCAGATAATCTTCGAGTTACAACCGAATGGATTGTCTTGAGACAGACATTGAGAATGGGTTGCCATTCAAATAAGTTTCACTGCAGAATGGATGTGTTCTAGCAAAGTGAACGGCTCACTTTATCCAAATATCTTCCAAGATCAGACTAATGACCACATGGAGAAATGACAAATCGATTGAGGTCACGAGTGTCTCCACATAGACAAAACAAGTGCACATGCAAAAAAGAATGTGGACAGGTAGCTGTCAGCCATTTCATGAAATGCTCTTCACATTCTGAGCATCCTGGGTCCTGGAGTAAAATAAAAGAGTTAGCAGAAGTCATCATCAATAGTACCAGAGAATACGCATATGTTTGAAGTGAATTGGTTATCCTACTCTCATAGAAATGACCAATGCGTAGCTCAATCATCAGCGCATTCAGATTATAACCATCTACAAAAATATATGTGGGCCATTCCAGGAAATGTAAACAATACCTCTGGGAAGTACTGGTGCTTTCAGATTGATCTTCATCCTCCTCTTCCTCTGTTTCATCTTCATCACTATCAATCTCCAAAAGATTTAATCTGCATTGGCTCAATACTCTTCTCATCAAGAAAACGTTCAAGTAATAACGCACCAACTCTATCCTGGTCTTTGAGGCAAGATGTTTTGATGCTACCGCCCAAAAAGTCTTATGGTCCATCACAGGGACCAACCTCTCAAGTGCATTAAACTTTAGTTGCTCCTCACGAGTCCACATTTTAGAAACCTCCTCACCCATTGAATCAAATCGCCATTCTGTGAAAGCTCTACCGAGTTCACACCTTAGCTGATCTCTGGCTGCATCTGTGTGATGCTGTCTGCAGAAGAAGGATCCCGGGTATGAACAGTTACATGATTCCATCCTTCCCTGGCCAGCTATTTTTTTATCAGTTTGTAGAACTTGACCTTCAGGTGGCCAAATTCTGGTTCCTAGCATCTTTGAGATGTTTGGGTCATTTTTGTAACGAGCAAGTTCATCTGAAGGTGGTTCAGTCCAGTCAGGTACCTCTGCCTGAAAATGCTCACCAACTCCAATCTTTTTCCTTTGTGTGAGGAGCACTGATGTCATGAGTTTCATTCTCTTAGCTAGCCTCTCTGATTTCCTTGTTGGCATATTCATCGAACCTTTACCTTTTTGTCTTTCTGCATGGTTATTGTGAGATCTGTACTTCCTTTTCTGCAAGATTGAAAACACAGGAAGCTCTAAAATAGTAAGAAAAGGAAATTGTTTTCCGCAGTATAATGCACAGTAGCAGCTGACATGAAAAATAAAAATAATCATAATCTGGCAAACAAACTGAAAAGTACTAAAGCAAAGTTATCAAACATCGACAAACTTCTGAGATAGGGGGGAAATTCCACAAACTTAACTCAGGGTTTTCGTAGTACTTAGAAGTAAAATTTGCCATGTAGATAGGAAACAATTGTTCACCACTTTTATTTGAACATTTCCAACTTATTTTACACGGAGTCCTCATGCCCTTATTAGATGAAACAAATGAAATAATCATGACTCAGTGGTATCCATGTTCACTGTGGAGTCTGAAATTGCAGTGATATGTTTACTGATAGAGAACACCAGGGGGGTAATGCTGCTGCATGATAGAAGACTACTGCTTGAGCATCTTTGACAAAAGAGCAAATCCTTGCAACGTCTCAGAGGTATACATGCATCCAATTTATGAAACTAGCATTGCCATTGCATACCACATAAGGTTTAGGCATGCAGAACACAAGATTCATAATAAAAGAATAAGAGTGAAGAGCCACTTTTCCTAAAGCAACACACCACCATATACATACCACCCAGAAAAGAAGTAATTCTGGTGAACAGGTAGTATCTCATCATAGCGTTTGATTTTCCGACTGATGGGATATCATGAATGCTTCGAACCATTTCTTTTTTGATGCAATCGCATTATATTCCTCAAATCGGTAAGAACTCCTACTAACAAGATTGCATACCACAGCAAAACTATGCCCTGGGTTTAGTCTATGTCATATGCTGTTATTTTCAAAGAATACATCAGCTTGCTCCTATGCACATTAAGTTATGCTTCGAAAGATAGTCAATTAAAATGACTCAATAGTTATAGACAAAACAGTTAAAATGAGTATTAAACATCAACTTAATCAAGTCACTATCAAGAAAACGGTTCGTCAGTCCTGGAATTATCTGGATAGCAAACAATTAGTGAGGATTTCCATGGCAAATATTTGTTTCTACCAATACTGCGTAAACATACTACCAATAAAACATTACCCAAAACATTCTCAATTCTTATATAACATTTCAAACTAATAAAAATCTCCTTCAGATATTTTATCTAACGATCAGTAATGAAGGCATGTGCACAAATGGGACTTCAAAATGAGCCCACTGGAGTGTTATTGGTAACATAACAAAAATCCAGAACCACAAGGATTTTAACAAGAAAATGACAATATTATACTTGAATTTCCAACAACAAAACCCATAGCTAATAAATTTAGGATCTGCCAAAGATTATTATCTATCACCCTTAAGTACCACTCTGCTTGTAGGCTGTTACACTGTCATTGGCATCTAGATAAATATCAGCCTCAAGCACAGGACATGTGTGTGAACTGCAGTTCCTGCTTCTCTCCACATATAAACACGCCATACTGGCACTTATCTGAGTTCCTTTACCACACTATGGCACCTGTGCTGGTCATATATGTTTTTTCAGCTTCAGACCAAAGCTTTTTCTGGGTCGAGGTTTCAGATCAATTCTGGAACGACTATAAAAATGATTCTTCTGGGACTAAATTATGAGGCTGTGACAGCCTTTTCACCAGCTCTACATGAAAATAGACAATGTGATAGTATATGTTACAACTCTAGGGTTCCAATTACCAGTATGATTATCCATGAAAGATATGAGTAGAGATCATTGATGGTTTTTATATATTCCATAATGTCAACACACTGCAACCACGATTTACACTATGCAACCATGTCCAGATTCCAGAAATATAGTTTTTATTTACAATAACAAAGAGGGGGATACAATTATTTTACATAAAGCAATCTCACATCAGTAATGTAATGAGGGTTTGTTAAAATTGGCTATACATGACACATATCATAAGCTGCTGCCAATGGATCTACAATCATGTCTGTCTATGTAAATACTTTTCTTATTGAACCCCCAATATGTAGACCTTTGTAAAAGGGTGTGTCAAGAAAGAAAATCTTGCTAATATAATTTTCTTGTTCTATGTCTGATCTAGCTTTCTCTTAATGTTTAGTGCAGTTTTCTACAGTATTACTCCTGGTGGCTCTAGTCAAGTGGGTAAAGTCCTTTGTCAAAAAGAGGAGAGGCTAGAGCGCCACTGATTTCATTAAAGAAGAGAAGGAAGTCTCAGAATGTGGTAACTTTATCGCAACACAAGAGAAGGCTCTACCAAAAAATTGAAACAAAAGAAACTAACTAAACAAAGAAAAAGAAATTTAAAACACCGCTTATCACTGCCAGTAAAATCATACTGTTACTCCATATGTAGACTGGATTTATACAGATCCAATGACCAACGTCATTGGCATCTTAACTAAGAGTCATTCCAATTTGTCCGCGATGTTTCATGTTTTACCTCAACATAATTTGCAGATATGTTTAGTGATCAATTATTTCACAAATACAATGTTGACTAAGAAGCTTTCTATGCCGTGCATTGAGCAAATAGACATCGGTCATGTAGCAGAATGTTTTCCGTTGTTAGACTTGAAGGTATAAAAACAAAGGTCCTATCGGTCATCCAGGAAAAACAGTGTCTGATGGAACCATCATGGTTCATGAATGCAGGCAACAGTTTTCTAACTGGTACTGCATTATGTGACACCGTCATGTGGAAATATATTGTAGTAGGTCACACTGTGCCTAATTTCCACAACATGCAGTTCCAATAAAAGCTCCCTTCAATTAGAAGATCTCGCTGAGATAATCGCATGTTTTAAGTCAGGATTCCCCTTCCGGATTAGAATCTTCTATTGTTAGTAAAAGTAAACAGTACATGTGTGTTTATGCAGGCTGTGATTTTATTCTATTGTAATGCCAGTGACAGATTCTATGAACAGGGCAGGACCGGTCAATTGTCAACACGCGGCCCTTGCGAGGCTGCGACTCCAGAGTCCAGACACAAAAGCACATCCAGAAAGCCAAACCTAATGGTACGAAAGGGAACAACACAAAGTGACAAAATCCTAGATGCAGCAGCAAACACCAACGGGCGCGTATCAAGCAAGAGGCCAGACGCGCAACATATGGGCAACAGATCGGAAATTGAGTAAAGGAGCTCACCTTGAAGAAGCTGGGTAGCTCGTCCGCGTTCGCAACGTCCTCCATCCTGAGGTAGCGAGCGCGCCGTAAGGCCAGCACCTGCCGCTTCCTCGCCTTGACCTCCGCCGGAACAGGCCGCGCCGCCACGGGATTCGCGGCGACCTCCCGCGTCCACCGCAGCAACTCCCCCAGATCCCCAACCCCGCCGGGACCGCGGCCGACGCCGCCGCCGTTGGCACCTCCCTCGCCGCGGAGCGGGAGCAGGATCTCCCCCATGAACGCCTCGAACAGCCGCCGTGGCTCGCCGGCTCCATGCGCCTGCGCCAGCGGCGAGGCTGCAACGGCAGCTGACGAGGATGTGGAGGTGGAGGTGGAGGCGGAGGCGGGCGCGTGCCGTGGCTGGTCACTGCAGTAGCCGCCGCTCAGGGGGAAGGGGTCTTCGACGAGCTGCTGCTGGTACATCCCGACCATCGGGGCGAGGTCGCCGCGGCCGGCCGCGGCGGCGGCGGGTGTAGCAGCCGCCTCGCCGCGCGCCCCCAGCTTGCTGCTCCCGCCTGCGCCTGCGAGGATGGAGGCCGCGGTTTATTAGCTGTAACTCGTAAAATTTGGGATGGAATTATGGAATGTTCGAGGTTAGGGAGTGGAGCGGAGGTGTGGTCCGTCGATGCAAAGCCTGATGGGCCCCACAGCCAGTGAGACGGGTTCATTGTGCCAGTGTGCCTATCTTGTCACGCAAAGCTGAAGAGGATTGACGCCTCTGAGCACAGCTCGAACAATAGCGGACTGTAAGCTAGCTATAAACACATATCGAGAAGATAAAAGAAAAAAGATATGAGCAGTAGCTGCAGTACAGACTTTAAGACGTAATGTGTGTATTAGAGCAAGTATAATAGTAGCTATAAGCCGGCTAAATATTGAGGTGGAGAAGAGAAGATAAGAGAGAGAGGAGAAGCGGGCTGTAAACTTATATTAAGCTTGGACACCGAACCAAAAAACTTTGTGAGAAAGATAAGTGGACCATGTATTAATTGTAAAAAGCTAGCTATTATGTGGGCGGGCTGAAAGAAGGCTAAAAAAACCTTATAGGCAACAGGTCGGCTTTATTATTAGCCTTGCTCTTAATAGTGAGATACGGAGTAAGTATATATTTATAGGTAATTATTGTATGAATTGGCTATAGATGATTTGGAGGTAGTAGTTAGGTATACTACTCCCTTCATCCCATAATATAAGGCATGGTCAAACTTGTCACAGTCTTCAAAACTAATCTTTGACTTATAATCTCTCATATGCTATAAGGTTTATTGTAACAAAATTATAACCATGTTAAAATAAATTTAAATGTTAATCCAATGATATTAATTTTAGCAAATAAAATTTAATTTATATTATAATAATTGTTGGTCAAATATTTTTAAAGTTAAATCTTGGAATACGTGTACATCTTATATTATAGGATAAGGGAGTATTAAACTTGCTCTTAGATTTGACTTGAGTACTGTAAGATTTCCTATTGCATTACTGCAAGCCAGAGAAATTAAAATCGATTGTAATGCAGCGCTCCATATTCAGGTGGTGTTTGGATCACATGGACTAATTTTAAGTACATGTCACGTCGTATATTGGGACACTAATTAGAACTATTAAACATAAACTAATGACAAAACCCATTCCATAACCCTGAACTATGTGAGCCTATTGAGCCTAATTAATCCATAATTAGCCTATGTGATGCTACAATAAACATGTGTTAATTATGTATTAATTAGGCTTAAAAATTTGTCTCGCGAATTAGCTCTTATTTATACAATCAGTTTTGTAATTAGTCTAAGTTTAATACTCCAAATTAGCGTCCAAACATCCGATATGACAGTGACTAAAATTTACTACCTAAATCCAAACACCACCTCAGTTCGTTGGTATCTATTAGGCTCGTCCTAACATACTACTTCTAGCATCCTAGAATTACCTTAAAATATAACAATTTATTCTCTTTTCAATCAACCACAATATTTCACCTTTCTTAATTTTTGCCAAATACTTTTTCTTCTGAACCAAAAACGTCAATTAGACATTTAATTTCTACTACTTTCTTGATAACCATGTTCAACATCAAATCTTTTTATATTTTAGAACAAAGGTAATAATCAATGCGCTACTTGCATCTTTTTAGTTCTACACTCCTATTACATGCACTTTGGTCGATAAAAGCAAGGATAAATAGTGAGCTCTAAACATGAAAAAAAGAGGTAAAGAAAAGTATGGAGTATTGGCTCTCAACCTCTCATACAAAAGCCACCTTTACACATGTTCTATGAAATATATGTAAGTCATAGTAAGAGAAATAAAAGAGAAAAACAGAATTGACCTCATAGCTAATCTATTATACATGTTAGCTCTATAATGAACTTATAGCTAGCAGTGGGTTCTACTGTTAAACTTGATTTAAGGGAAAAAAGATCAAGCTAATCTAAAATAAATTATAAATAAAACTTTTACATAGGTATTAGTAACGATTCAAAACTAATGTTGAAGAATAAATTAAGATGAAAAAAATCTCAAAGCCAACTTCATATTTAAGTTTTTTTTGTTATGCCTAATAAGCCAGCGATGGGGCAGTAGGGCTACTACTTCTGTCAAATTATAGACCGAACTAATATTCTTCAAGGACTTTTTTTATGGTTTTATTTTGCTTTTGCTCGTTGATGAGTAAGCACTGCAATGATAGCACGATGCAATGAACTCAACAAGGGGTACTGGCGTGGTGCTACAGTATTTGTGCAAAGCACAACGTCGTGGTCCTTTCTTGGCCCGCTGACATGTCGGCGTCACCAAAAGAAGATTGATATAAACAGGTTTTTTTTAATTATTAAAAAACTGGTTTTTTTGGAAAAAAAATTAAAACTTATGTGTCATTAAGACGTACAGCTTGAAAATATGCACCACAAAAAACTTGCCGCAGCTTATCTAACCTTACTTGTTAAAAAAACCTATATGCAGAAGCATAACAAAACACCTAAATCTGAATATAACTGCTAGTCTATTTATTAATTATCTCTACAGTTTATCTCTTGTGTTTTGTTTAAACAACTCTAGGACTTTCTTTAGAATTGAGGAATTTCAAAGGAATTATGGAGGATTTGAACCAAACGCTGCAAAATTCATGTGTTTAGTGGTACCATAAATAATCAGTAAAAATCGCGCATTTGAAAGGTACCATGAATAATCGGTTGCCAAAAAAAATATAGTTTGCTTGAAATTTAAACTTGTCTTCACAAATTATGCTACTCCATCCGTTTCAAATTTGAAATAAAAAGATTGACTATAATTTTTAGGATGGATGGAGTATCAAACAGCTGTTTCTCTCATTTATTCTGATTTATTCAGGTGTCAGATGCGCAATATAGTACCCACAGCCATCTTGAGACTCAAGCTCTGGAAATAAACCTTAGTAGAATTGGGGGCAAAGTGGAAGAGGCCAAGAGGCCACGGGCATCAGATGGCCCCGACAAGGACGCATCAGATTTGATGGAAGAAGATGAGATAAGAGATGAGCCACACGCCAATATCTAGTTGGATATGCAGGAGTTCGGCTGAGAGCGTTCCCAGCGCGCACAGTAAACACGGAAAACGGAGCGGTCATTAGCGCGTGATTAATTAAGTATTAGCTAATTTTTTTTAAAAAAATGGATTAATTTGATTTTTTTTAAACAACTTTTGTATAGAAACTTTTTGCAAAAAAATGCACCGTGTAGTAGTTTGAAAAGCGTGCGCGGACGAAAAGTTACTGTGCACGCCGGGAAAACAGCTGCCGAACACAGCCTTAAGTGAGACCACAAGTCCACAAGGATTTCGATAGCTGTACTTGTGCACATACGCCGCCTGCCGGCAGTGTTCCGTCCCGGTTTGCTCCATGCCAACAACCAGATCCAGGGCATCCAGCAATTAGATGCAAAGTATAGTACTACAAGTAAGTAGTACGGAGAAGACAAGGACCTGAAGAACAAGGAATGTCTAGTTCTTCCCAAGGAATGTCTTCTAGTTCTTGCTGCATATCCAATATGCACGCATTCAAGTTTCCAGCAACCCCAGTCCCCAGGGCCCTAATCGAAACGTGACCGGGTAAACAGCCCGGCCGAGACAGGACGGCGGCGGCGGAGACAGCAACGGTACCTCGGACGAGCATGGAGAGAATCTGACGCGAATTCCTGTACGTTTATCTGTGGTGCTACCGCGACCTTCTGTTCATCTGTTGTTGTTGATGGGGGTGACAGGACAGGGCAAGCAGCTCCAACCAGCGGAGGACACGACGAGTTGGGAGATTGACCCCTAGACCTGGTAGCACTAGGAGTTACGAGAAGAAAAGGAAGTGGTCAAATTCTTCGCGGGTATAGGGATTGGTGAATGGTGGTGATGCAGGCGAAAGATTCCTGAAGATGAGATACTCCACGGCAGCCGATTCGCTGAAGTAGCCGATTCGAATCAAGGCACAGTCTCAACTTCGCAAGAGGAATCAGCCACCCAAACCGTGAACTGTGCAACCCCAATTAGCGAATCCTGCGGCGCGGAGAGACTTTGGATCGAGCGCCGACACCGGAAAAGCTCTAAATATGTGGTACAATCACTCTAACAAACTCTAGATCTATAGGGAGGATTAGCCGTTAGCTCACGACTAAACAGAACTGCCCGTTCACGAGACTGGGGTGCGCCGGCTCCAAATTTCCCCCAAAATTAGGGCTACCATTTTAGCGTTTCTACCAGCAATTTCACCATGGAATTAACGAAGCTATACGAGCAGCTAAATAAAGCAAATTATAAAAAGATGGAACTGTACAAGAAGGGGCAGGAGAAAGGAGGGGGAGGGTGAGGAGGAGGGGCGACGAGAAGGGAAAGGGAGGGGGGGAGAAGTACTCACGGTCACAGGAGAGGACATGCGAGGAGACGGTCGCCGGGTCTCGCGGGTCGGGCACGGCTGCGGCTGCGGCGCCCAACATACGGGCGGCACGGCCCAGCGAGAGACGCGGCAGGGGGGAGCCAGCGAAACGCTACCGGGGGACCTCTC
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| CDS seq | MLGAAAAAVPDPRDPATVSSHVLSCDRAGGSSKLGARGEAAATPAAAAAGRGDLAPMVGMYQQQLVEDPFPLSGGYCSDQPRHAPASASTSTSTSSSAAVAASPLAQAHGAGEPRRLFEAFMGEILLPLRGEGGANGGGVGRGPGGVGDLGELLRWTREVAANPVAARPVPAEVKARKRQVLALRRARYLRMEDVANADELPSFFKGMRTPCKISWKCSNKSGEQLFPIYMANFTSKYYENPEKRKYRSHNNHAERQKGKGSMNMPTRKSERLAKRMKLMTSVLLTQRKKIGVGEHFQAEVPDWTEPPSDELARYKNDPNISKMLGTRIWPPEGQVLQTDKKIAGQGRMESCNCSYPGSFFCRQHHTDAARDQLRCELGRAFTEWRFDSMGEEVSKMWTREEQLKFNALERLVPVMDHKTFWAVASKHLASKTRIELVRYYLNVFLMRRVLSQCRLNLLEIDSDEDETEEEEDEDQSESTSTSQRTQDAQNVKSIS
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| Protein seq | MLGAAAAAVPDPRDPATVSSHVLSCDRAGGSSKLGARGEAAATPAAAAAGRGDLAPMVGMYQQQLVEDPFPLSGGYCSDQPRHAPASASTSTSTSSSAAVAASPLAQAHGAGEPRRLFEAFMGEILLPLRGEGGANGGGVGRGPGGVGDLGELLRWTREVAANPVAARPVPAEVKARKRQVLALRRARYLRMEDVANADELPSFFKGMRTPCKISWKCSNKSGEQLFPIYMANFTSKYYENPEKRKYRSHNNHAERQKGKGSMNMPTRKSERLAKRMKLMTSVLLTQRKKIGVGEHFQAEVPDWTEPPSDELARYKNDPNISKMLGTRIWPPEGQVLQTDKKIAGQGRMESCNCSYPGSFFCRQHHTDAARDQLRCELGRAFTEWRFDSMGEEVSKMWTREEQLKFNALERLVPVMDHKTFWAVASKHLASKTRIELVRYYLNVFLMRRVLSQCRLNLLEIDSDEDETEEEEDEDQSESTSTSQRTQDAQNVKSIS |
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| Function | AT-rich interactive domain-containing protein 2 [UniProtKB/Swiss-Prot:Q9LDD4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsY3551G0101406600.01 | OsY3551G0101406600.01.T06 | Chr01 | 37963057 | 37969958 | - | IGDBv1 | ||
| CDS seq | ATGTTGGGCGCCGCAGCCGCAGCCGTGCCCGACCCGCGAGACCCGGCGACCGTCTCCTCGCATGTCCTCTCCTGTGACCGCGCAGGCGGGAGCAGCAAGCTGGGGGCGCGCGGCGAGGCGGCTGCTACACCCGCCGCCGCCGCGGCCGGCCGCGGCGACCTCGCCCCGATGGTCGGGATGTACCAGCAGCAGCTCGTCGAAGACCCCTTCCCCCTGAGCGGCGGCTACTGCAGTGACCAGCCACGGCACGCGCCCGCCTCCGCCTCCACCTCCACCTCCACATCCTCGTCAGCTGCCGTTGCAGCCTCGCCGCTGGCGCAGGCGCATGGAGCCGGCGAGCCACGGCGGCTGTTCGAGGCGTTCATGGGGGAGATCCTGCTCCCGCTCCGCGGCGAGGGAGGTGCCAACGGCGGCGGCGTCGGCCGCGGTCCCGGCGGGGTTGGGGATCTGGGGGAGTTGCTGCGGTGGACGCGGGAGGTCGCCGCGAATCCCGTGGCGGCGCGGCCTGTTCCGGCGGAGGTCAAGGCGAGGAAGCGGCAGGTGCTGGCCTTACGGCGCGCTCGCTACCTCAGGATGGAGGACGTTGCGAACGCGGACGAGCTACCCAGCTTCTTCAAGAGCTGGTGA
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| Protein seq | MLGAAAAAVPDPRDPATVSSHVLSCDRAGGSSKLGARGEAAATPAAAAAGRGDLAPMVGMYQQQLVEDPFPLSGGYCSDQPRHAPASASTSTSTSSSAAVAASPLAQAHGAGEPRRLFEAFMGEILLPLRGEGGANGGGVGRGPGGVGDLGELLRWTREVAANPVAARPVPAEVKARKRQVLALRRARYLRMEDVANADELPSFFKSW
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | None | None | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0852500 | RBH | 1.079138 | 1.600661 | 2.756494 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g63354 | RBH | 0.684479 | 1.009764 | 0.715879 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0852500 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0040550 | RBH | 0.619149 | 7.122203 | 6.437382 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0040030 | RBH | 0.208769 | 0.000000 | 2.417639 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0040430 | RBH | 1.410922 | 6.774677 | 5.467491 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0039900 | RBH | 0.076599 | 0.501176 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0039490 | RBH | 2.683543 | 7.171784 | 12.314040 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0605600 | RBH | 6.0207455 | 19.578375 | 19.9035625 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0039170 | RBH | 0.102203 | 0.477837 | 1.453364 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0604300 | RBH | 7.2780445 | 20.5019155 | 18.851963 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0039530 | RBH | 0.316161 | 0.196931 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0039470 | RBH | 0.294638 | 2.450812 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0039710 | RBH | 3.758888 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0039680 | RBH | 0.581426 | 0.641925 | 0.740845 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0039570 | RBH | 0.510134 | 2.633549 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G040020 | RBH | 0.283351 | 2.765814 | 2.457576 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0039700 | RBH | 1.001501 | 7.287332 | 7.191329 |
| Os XI: R9311 | R9311 | AGIS | R9311C01g04460 | RBH | None | None | None |
| Os XI-adm: HZ | HZ | PKU | OsHZ_01g0465600 | RBH | None | None | None |
| Os XI-adm: J4155S | J4155S | PKU | OsJ4155_01g0468600 | RBH | None | None | None |
| Os XI-adm: LK638S | LK638S | PKU | OsLK638S_01g0442400 | RBH | None | None | None |
| Os XI-adm: XL628S | XL628S | PKU | OsXL628S_01g0471400 | RBH | None | None | None |
| Os GJ-temp: 02428 | 02428 | SICAU | Os02428G0101418600.01 | RBH | None | None | None |
| Os cB: Basmati1 | Basmati1 | SICAU | OsBasmati1G0105000400.01 | RBH | None | None | None |
| Os O.glaberrima: Ogla | OglaRS2 | DIADE | Oglab_004352 | RBH | None | None | None |
| Os XI-1A: CN1 | CN1 | SICAU | OsCN1G0104570600.01 | RBH | None | None | None |
| Os XI-1A: D62 | D62 | SICAU | OsD62G0104661600.01 | RBH | None | None | None |
| Os XI-1A: DG | DG | SICAU | OsDGG0101622200.01 | RBH | None | None | None |
| Os GJ-temp: DHX2 | DHX2 | SICAU | OsDHX2G0101419200.01 | RBH | None | None | None |
| Os XI-adm: FH838 | FH838 | SICAU | OsFH838G0100887000.01 | RBH | None | None | None |
| Os XI-1A: FS32 | FS32 | SICAU | OsFS32G0101525000.01 | RBH | None | None | None |
| Os XI-1A: G46 | G46 | SICAU | OsG46G0101629200.01 | RBH | None | None | None |
| Os XI-adm: G630 | G630 | SICAU | OsG630G0101406600.01 | RBH | None | None | None |
| Os XI-1B: G8 | G8 | SICAU | OsG8G0101395800.01 | RBH | None | None | None |
| Os XI-1A: II32 | II32 | SICAU | OsII32G0104643800.01 | RBH | None | None | None |
| Os XI-1B: J4155 | J4155 | SICAU | OsJ4155G0101399800.01 | RBH | None | None | None |
| Os GJ-temp: Kosh | Kosh | SICAU | OsKoshG0101407000.01 | RBH | None | None | None |
| Os GJ-temp: KY131 | KY131 | SICAU | OsKY131G0101068200.01 | RBH | None | None | None |
| Os GJ-trp: Lemont | Lemont | SICAU | OsLemontG0101435800.01 | RBH | None | None | None |
| Os GJ-adm: LJ | LJ | SICAU | OsLJG0101409800.01 | RBH | None | None | None |
| Os GJ-sbtrp: NamRoo | NamRoo | SICAU | OsNamRooG0101416800.01 | RBH | None | None | None |
| Os XI-1B: R498 | R498 | SICAU | OsR498G0102348400.01 | RBH | None | None | None |
| Os XI-1B: R527 | R527 | SICAU | OsR527G0102697400.01 | RBH | None | None | None |
| Os XI-1B: S548 | S548 | SICAU | OsS548G0107543400.01 | RBH | None | None | None |
| Os XI-2: TM | TM | SICAU | TMG0101422200.01 | RBH | None | None | None |
| Os XI-3: Tumba | Tumba | SICAU | OsTumbaG0101372600.01 | RBH | None | None | None |
| Os XI-adm: WSSM | WSSM | SICAU | OsWSSMG0101381000.01 | RBH | None | None | None |
| Os XI-1B: Y3551 | Y3551 | SICAU | NA | NA | NA | NA | NA |
| Os XI-1B: Y58S | Y58S | SICAU | OsY58SG0101409200.01 | RBH | None | None | None |
| Os XI-adm: YX1 | YX1 | SICAU | OsYX1G0101415400.01 | RBH | None | None | None |
| Os GJ-temp: ZH11 | ZH11 | SICAU | OsZH11G0101408800.01 | RBH | None | None | None |
