Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsR527G0102697400.01 | OGI:01109280 | 50/50 | Os XI-1B: R527 | R527 | SICAU | Chr01:37920972-37930623 | ||||||||
| Gene Symbol | - | ||||||||||
| Mutant | - | ||||||||||
| Stuctural Variations | HZ_R527_DEL0127110,127564_R527_DEL0130660,OglaRS2_R527_OTH0157340,128077_R527_DEL0152260,128077_R527_OTH0152270,Kosh_R527_DEL0156030,Kosh_R527_OTH0156040,G46_R527_TRA0139080,YX1_R527_OTH0131650,DHX2_R527_DEL0156540,DHX2_R527_OTH0156550,Tumba_R527_OTH0129570,D62_R527_DEL0124400,127652_R527_OTH0143160,Nipponbare_R527_DEL0154890,Nipponbare_R527_OTH0154900,LJ_R527_DEL0154880,LJ_R527_OTH0154890,Basmati1_R527_DEL0147870,Basmati1_R527_OTH0147880,Azucena_R527_DEL0154620,Azucena_R527_OTH0154630,CN1_R527_OTH0134300,117534_R527_OTH0146930,ZS97RS3_R527_OTH0138100,II32_R527_OTH0136640,132278_R527_DEL0157780,132278_R527_TRA0111780,G8_R527_OTH0128060,XL628S_R527_TRA0141580,KY131_R527_DEL0156370,KY131_R527_OTH0156380,125619_R527_TRA0141900,R9311_R527_OTH0132020,S548_R527_DEL0124970,WSSM_R527_DEL0128820,117425_R527_DEL0149130,117425_R527_OTH0149140,TM_R527_TRA0132730,NamRoo_R527_DEL0156740,NamRoo_R527_OTH0156750,LK638S_R527_TRA0139250,DG_R527_OTH0134430,02428_R527_DEL0155350,02428_R527_OTH0155360,ZH11_R527_DEL0156200,ZH11_R527_OTH0156210,
More
|
||||||||||
| DNA seq | TTATCGTGCCAAAATGTAAATATTAACACAAGAAGAGATCCTATTAAAACTGGAGTTAAAAGAAAAAAAAAACAGAACGATAGATATGCATTGCCAAAAAAGCTTGCTAAAGGCGACACATTGGCCCTTCCAAGTCTCAATAATAAGAAATGTTCCAGACCATTTGTTTTCTTTCCCCCAATCTACTTTTCCTTTTCTTTTCCTGTACAATGGGAAACAATTCAGATCAGATAATCTTCGAGTTACAACCGAATGGATTGTCTTGAGACAGACATTGAGAATGGTTTGCCATTCAAATAAGTTTCACTGCAGAATGGATGTGTTCTAGCAAAGTGAACGGCTCACTTTATCCAAATATCTTCCAAGATCAGACTAATGACCACATGGAGAAATGACAAATCGATTGAGGTCACGAGTGTCTCCACATAGACAAAACAAGTGCACATGCAAAAAAGAATGTGGACAGGTAGCTGTCAGCCATTTCATGAAATGCTCTTCACATTCTGAGCATCCTGGGTCCTGGAGTAAAATAAAAGAGTTAGCAGAAGTCATCATCAATAGTACCAGAGAATACGCATATGTTTGAAGTGAATTGGTTATCCTACTCTCATAGAAATGACCAATGCGTAGCTCAATCATCAGCGCATTCAGATTATAACCATCTACAAAAATATATGTGGGCCATTCCAGGAAATGTAAACAATACCTCTGGGAAGTACTGGTGCTTTCAGATTGATCTTCATCCTCCTCTTCCTCTGTTTCATCTTCATCACTATCAATCTCCAAAAGATTTAATCTGCATTGGCTCAATACTCTTCTCATCAAGAAAACGTTCAAGTAATAACGCACCAACTCTATCCTGGTCTTTGAGGCAAGATGTTTTGATGCTACCGCCCAAAAAGTCTTATGGTCCATCACAGGGACCAACCTCTCAAGTGCATTAAACTTTAGTTGCTCCTCACGAGTCCACATTTTAGAAACCTCCTCACCCATTGAATCAAATCGCCATTCTGTGAAAGCTCTACCGAGTTCACACCTTAGCTGATCTCTGGCTGCATCTGTGTGATGCTGTCTGCAGAAGAAGGATCCCGGGTATGAACAGTTACATGATTCCATCCTTCCCTGGCCAGCTATTTTTTTATCAGTTTGTAGAACTTGACCTTCAGGTGGCCAAATTCTGGTTCCTAGCATCTTTGAGATGTTTGGGTCATTTTTGTAACGAGCAAGTTCATCTGAAGGTGGTTCAGTCCAGTCAGGTACCTCTGCCTGAAAATGCTCACCAACTCCAATCTTTTTCCTTTGTGTGAGGAGCACTGATGTCATGAGTTTCATTCTCTTAGCTAGCCTCTCTGATTTCCTTGTTGGCATATTCATCGAACCTTTACCTTTTTGTCTTTCTGCATGGTTATTGTGAGATCTGTACTTCCTTTTCTGCAAGATTGAAAACACAGGAAGCTCTAAAATAGTAAGAAAAGGAAATTGTTTTCCGCAGTATAATGCACAGTAGCAGCTGACATGAAAAATAAAAATAATCATAATCTGGCAAACAAACTGAAAAGTACTAAAGCAAAGTTATCAAACATCGACAAACTTCTGAGATAGGGGGGAAATTCCACAAACTTAACTCAGGGTTTTCGTAGTACTTAGAAGTAAAATTTGCCATGTAGATAGGAAACAATTGTTCACCACTTTTATTTGAACATTTCCAACTTATTTTACACGGAGTCCTCATGCCCTTATTAGATGAAACAAATGAAATAATCATGACTCAGTGGTATCCATGTTCACTGTGGAGTCTGAAATTGCAGTGATATGTTTACTGATAGAGAACACCAGGGGGGTAATGCTGCTGCATGATAGAAGACTACTGCTTGAGCATCTTTGACAAAAGAGCAAATCCTTGCAACGTCTCAGAGGTATACATGCATCCAATTTATGAAACTAGCATTGCCATTGCATACCACATAAGGTTTAGGCATGCAGAACACAAGATTCATAATAAAAGAATAAGAGTGAAGAGCCACTTTTCCTAAAGCAACACACCACCATATACATACCACCCAGAAAAGAAGTAATTCTGGTGAACAGGTAGTATCTCATCATAGCGTTTGATTTTCCGACTGATGGGATATCATGAATGCTTCGAACCATTTCTTTTTTGATGCAATCGCATTATATTCCTCAAATCGGTAAGAACTCCTACTAACAAGATTGCATACCACAGCAAAACTATGCCCTGGGTTTAGTCTATGTCATATGCTGTTATTTTCAAAGAATACATCAGCTTGCTCCTATGCACATTAAGTTATGCTTCGAAAGATAGTCAATTAAAATGACTCAATAGTTATAGACAAAACAGTTAAAATGAGTATTAAACATCAACTTAATCAAGTCACTATCAAGAAAACGGTTCGTCAGTCCTGGAATTATCTGGATAGCAAACAATTAGTGAGGATTTCCATGGCAAATATTTGTTTCTACCAATACTGCGTAAACATACTACCAATAAAACATTACCCAAAACATTCTCAATTCTTATATAACATTTCAAACTAATAAAAATCTCCTTCAGATATTTTATCTAACGATCAGTAATGAAGGCATGTGCACAAATGGGACTTCAAAATGAGCCCACTGGAGTGTTATTGGTAACATAACAAAAATCCAGAACCACAAGGATTTTAACAAGAAAATGACAATATTATACTTGAATTTCCAACAACAAAACCCATAGCTAATAAATTTAGGATCTGCCAAAGATTATTATCTATCACCCTTAAGTACCACTCTGCTTGTAGGCTGTTACACTGTCATTGGCATCTAGATAAATATCAGCCTCAAGCACAGGACATGTGTGTGAACTGCAGTTCCTGCTTCTCTCCACATATAAACACGCCATACTGGCACTTATCTGAGTTCCTTTACCACACTATGGCACCTGTGCTGGTCATATATGTTTTTTCAGCTTCAGACCAAAGCTTTTTCTGGGTCGAGGTTTCAGATCAATTCTGGAACGACTATAAAAATGATTCTTCTGGGACTAAATTATGAGGCTGTGACAGCCTTTTCACCAGCTCTACATGAAAATAGACAATGTGATAGTATATGTTACAACTCTAGGGTTCCAATTACCAGTATGATTATCCATGAAAGATATGAGTAGAGATCATTGATGGTTTTTATATATTCCATAATGTCAACACACTGCAACCACGATTTACACTATGCAACCATGTCCAGATTCCAGAAATATAGTTTTTATTTACAATAACAAAGAGGGGGATACAATTATTTTACATAAAGCAATCTCACATCAGTAATGTAATGAGGGTTTGTTAAAATTGGCTATACATGACACATATCATAAGCTGCTGCCAATGGATCTACAATCATGTCTGTCTATGTAAATACTTTTCTTATTGAACCCCCAATATGTAGACCTTTGTAAAAGGGTGTGTCAAGAAAGAAAATCTTGCTAATATAATTTTCTTGTTCTATGTCTGATCTAGCTTTCTCTTAATGTTTAGTGCAGTTTTCTACAGTATTACTCCTGGTGGCTCTAGTCAAGTGGGTAAAGTCCTTTGTCAAAAAGAGGAGAGGCTAGAGCGCCACTGATTTCATTAAAGAAGAGAAGGAAGTCTCAGAATGTGGTAACTTTATCGCAACACAAGAGAAGGCTCTACCAAAAAATTGAAACAAAAGAAACTAACTAAACAAAGAAAAAGAAATTTAAAACACCGCTTATCACTGCCAGTAAAATCATACTGTTACTCCATATGTAGACTGGATTTATACAGATCCAATGACCAACGTCATTGGCATCTTAACTAAGAGTCATTCCAATTTGTCCGCGATGTTTCATGTTTTACCTCAACATAATTTGCAGATATGTTTAGTGATCAATTATTTCACAAATACAATGTTGACTAAGAAGCTTTCTATGCCGTGCATTGAGCAAATAGACATCGGTCATGTAGCAGAATGTTTTCCGTTGTTAGACTTGAAGGTATAAAAACAAAGGTCCTATCGGTCATCCAGGAAAAACAGTGTCTGATGGAACCATCATGGTTCATGAATGCAGGCAACAGTTTTCTAACTGGTACTGCATTATGTGACACCGTCATGTGGAAATATATTGTAGTAGGTCACACTGTGCCTAATTTCCACAACATGCAGTTCCAATAAAAGCTCCCTTCAATTAGAAGATCTCGCTGAGATAATCGCATGTTTTAAGTCAGGATTCCCCTTCCGGATTAGAATCTTCTATTGTTAGTAAAAGTAAACAGTACATGTGTGTTTATGCAGGCTGTGATTTTATTCTATTGTAATGCCAGTGACAGATTCTATGAACAGGGCAGGACCGGTCAATTGTCAACACGCGGCCCTTGCGAGGCTGCGACTCCAGAGTCCAGACACAAAAGCACATCCAGAAAGCCAAACCTAATGGTACGAAAGGGAACAACACAAAGTGACAAAATCCTAGATGCAGCAGCAAACACCAACGGGCGCGTATCAAGCAAGAGGCCAGACGCGCAACATATGGGCAACAGATCGGAAATTGAGTAAAGGAGCTCACCTTGAAGAAGCTGGGTAGCTCGTCCGCGTTCGCAACGTCCTCCATCCTGAGGTAGCGAGCGCGCCGTAAGGCCAGCACCTGCCGCTTCCTCGCCTTGACCTCCGCCGGAACAGGCCGCGCCGCCACGGGATTCGCGGCGACCTCCCGCGTCCACCGCAGCAACTCCCCCAGATCCCCAACCCCGCCGGGACCGCGGCCGACGCCGCCGCCGTTGGCACCTCCCTCGCCGCGGAGCGGGAGCAGGATCTCCCCCATGAACGCCTCGAACAGCCGCCGTGGCTCGCCGGCTCCATGCGCCTGCGCCAGCGGCGAGGCTGCAACGGCAGCTGACGAGGATGTGGAGGTGGAGGTGGAGGCGGAGGCGGGCGCGTGCCGTGGCTGGTCACTGCAGTAGCCGCCGCTCAGGGGGAAGGGGTCTTCGACGAGCTGCTGCTGGTACATCCCGACCATCGGGGCGAGGTCGCCGCGGCCGGCCGCGGCGGCGGCGGGTGTAGCAGCCGCCTCGCCGCGCGCCCCCAGCTTGCTGCTCCCGCCTGCGCCTGCGAGGATGGAGGCCGCGGTTTATTAGCTGTAACTCGTAAAATTTGGGATGGAATTATGGAATGTTCGAGGTTAGGGAGTGGAGCGGAGGTGTGGTCCGTCGATGCAAAGCCTGATGGGCCCCACAGCCAGTGAGACGGGTTCATTGTGCCAGTGTGCCTATCTTGTCACGCAAAGCTGAAGAGGATTGACGCCTCTGAGCACAGCTCGAACAATAGCGGACTGTAAGCTAGCTATAAACACATATCGAGAAGATAAAAGAAAAAAGATATGAGCAGTAGCTGCAGTACAGACTTTAAGACGTAATGTGTGTATTAGAGCAAGTATAATAGTAGCTATAAGCCGGCTAAATATTGAGGTGGAGAAGAGAAGATAAGAGAGAGAGGAGAAGCGGGCTGTAAACTTATATTAAGCTTGGACACCGAACCAAAAAACTTTGTGAGAAAGATAAGTGGACCATGTATTAATTGTAAAAAGCTAGCTATTATGTGGGCGGGCTGAAAGAAGGCTAAAAAAACCTTATAGGCAACAGGTCGGCTTTATTATTAGCCTTGCTCTTAATAGTGAGATACGGAGTAAGTATATATTTATAGGTAATTATTGTATGAATTGGCTATAGATGATTTGGAGGTAGTAGTTAGGTATACTACTCCCTTCATCCCATAATATAAGGCATGGTCAAACTTGTCACAGTCTTCAAAACTAATCTTTGACTTATAATCTCTCATATGCTATAAGGTTTATTGTAACAAAATTATAACCATGTTAAAATAAATTTAAATGTTAATCCAATGATATTAATTTTAGCAAATAAAATTTAATTTATATTATAATAATTGTTGGTCAAATATTTTTAAAGTTAAATCTTGGAATACGTGTACATCTTATATTATAGGATAAGGGAGTATTAAACTTGCTCTTAGATTTGACTTGAGTACTGTAAGATTTCCTATTGCATTACTGCAAGCCAGAGAAATTAAAATCGATTGTAATGCAGCGCTCCATATTCAGGTGGTGTTTGGATCACATGGACTAATTTTAAGTACATGTCACGTCGTATATTGGGACACTAATTAGAACTATTAAACATAAACTAATGACAAAACCCATTCCATAACCCTGAACTATGTGAGCCTATTGAGCCTAATTAATCCATAATTAGCCTATGTGATGCTACAATAAACATGTGTTAATTATGTATTAATTAGGCTTAAAAATTTGTCTCGCGAATTAGCTCTTATTTATACAATCAGTTTTGTAATTAGTCTAAGTTTAATACTCCAAATTAGCGTCCAAACATCCGATATGACAGTGACTAAAATTTACTACCTAAATCCAAACACCACCTCAGTTCGTTGGTATCTATTAGGCTCGTCCTAACATACTACTTCTAGCATCCTAGAATTACCTTAAAATATAACAATTTATTCTCTTTTCAATCAACCACAATATTTCACCTTTCTTAATTTTTGCCAAATACTTTTTCTTCTGAACCAAAAACGTCAATTAGACATTTAATTTCTACTACTTTCTTGATAACCATGTTCAACATCAAATCTTTTTATATTTTAGAACAAAGGTAATAATCAATGCGCTACTTGCATCTTTTTAGTTCTACACTCCTATTACATGCACTTTGGTCGATAAAAGCAAGGATAAATAGTGAGCTCTAAACATGAAAAAAAGAGGTAAAGAAAAGTATGGAGTATTGGCTCTCAACCTCTCATACAAAAGCCACCTTTACACATGTTCTATGAAATATATGTAAGTCATAGTAAGAGAAATAAAAGAGAAAAACAGAATTGACCTCATAGCTAATCTATTATACATGTTAGCTCTATAATGAACTTATAGCTAGCAGTGGGTTCTACTGTTAAACTTGATTTAAGGGAAAAAAGATCAAGCTAATCTAAAATAAATTATAAATAAAACTTTTACATAGGTATTAGTAACGATTCAAAACTAATGTTGAAGAATAAATTAAGATGAAAAAAATCTCAAAGCCAACTTCATATTTAAGTTTTTTTTGTTATGCCTAATAAGCCAGCGATGGGGCAGTAGGGCTACTACTTCTGTCAAATTATAGACCGAACTAATATTCTTCAAGGACTTTTTTTATGGTTTTATTTTGCTTTTGCTCGTTGATGAGTAAGCACTGCAATGATAGCACGATGCAATGAACTCAACAAGGGGTACTGGCGTGGTGCTACAGTATTTGTGCAAAGCACAACGTCGTGGTCCTTTCTTGGCCCGCTGACATGTCGGCGTCACCAAAAGAAGATTGATATAAACAGGTTTTTTTTAATTATTAAAAAACTGGTTTTTTTGGAAAAAAAATTAAAACTTATGTGTCATTAAGACGTACAGCTTGAAAATATGCACCACAAAAAACTTGCCGCAGCTTATCTAACCTTACTTGTTAAAAAAACCTATATGCAGAAGCATAACAAAACACCTAAATCTGAATATAACTGCTAGTCTATTTATTAATTATCTCTACAGTTTATCTCTTGTGTTTTGTTTAAACAACTCTAGGACTTTCTTTAGAATTGAGGAATTTCAAAGGAATTATGGAGGATTTGAACCAAACGCTGCAAAATTCATGTGTTTAGTGGTACCATAAATAATCAGTAAAAATCGCGCATTTGAAAGGTACCATGAATAATCGGTTGCCAAAAAAAATATAGTTTGCTTGAAATTTAAACTTGTCTTCACAAATTATGCTACTCCATCCGTTTCAAATTTGAAATAAAAAGATTGACTATAATTTTTAGGATGGATGGAGTATCAAACAGCTGTTTCTCTCATTTATTCTGATTTATTCAGGTGTCAGATGCGCAATATAGTACCCACAGCCATCTTGAGACTCAAGCTCTGGAAATAAACCTTAGTAGAATTGGGGGCAAAGTGGAAGAGGCCAAGAGGCCACGGGCATCAGATGGCCCCGACAAGGACGCATCAGATTTGATGGAAGAAGATGAGATAAGAGATGAGCCACACGCCAATATCTAGTTGGATATGCAGGAGTTCGGCTGAGAGCGTTCCCAGCGCGCACAGTAAACACGGAAAACGGAGCGGTCATTAGCGCGTGATTAATTAAGTATTAGCTAATTTTTTTTAAAAAAATGGATTAATTTGATTTTTTTTAAACAACTTTTGTATAGAAACTTTTTGCAAAAAAATGCACCGTGTAGTAGTTTGAAAAGCGTGCGCGGACGAAAAGTTACTGTGCACGCCGGGAAAACAGCTGCCGAACACAGCCTTAAGTGAGACCACAAGTCCACAAGGATTTCGATAGCTGTACTTGTGCACATACGCCGCCTGCCGGCAGTGTTCCGTCCCGGTTTGCTCCATGCCAACAACCAGATCCAGGGCATCCAGCAATTAGATGCAAAGTATAGTACTACAAGTAAGTAGTACGGAGAAGACAAGGACCTGAAGAACAAGGAATGTCTAGTTCTTCCCAAGGAATGTCTTCTAGTTCTTGCTGCATATCCAATATGCACGCATTCAAGTTTCCAGCAACCCCAGTCCCCAGGGCCCTAATCGAAACGTGACCGGGTAAACAGCCCGGCCGAGACAGGACGGCGGCGGCGGAGACAGCAACGGTACCTCGGACGAGCATGGAGAGAATCTGACGCGAATTCCTGTACGTTTATCTGTGGTGCTACCGCGACCTTCTGTTCATCTGTTGTTGTTGATGGGGGTGACAGGACAGGGCAAGCAGCTCCAACCAGCGGAGGACACGACGAGTTGGGAGATTGACCCCTAGACCTGGTAGCACTAGGAGTTACGAGAAGAAAAGGAAGTGGTCAAATTCTTCGCGGGTATAGGGATTGGTGAATGGTGGTGATGCAGGCGAAAGATTCCTGAAGATGAGATACTCCACGGCAGCCGATTCGCTGAAGTAGCCGATTCGAATCAAGGCACAGTCTCAACTTCGCAAGAGGAATCAGCCACCCAAACCGTGAACTGTGCAACCCCAATTAGCGAATCCTGCGGCGCGGAGAGACTTTGGATCGAGCGCCGACACCGGAAAAGCTCTAAATATGTGGTACAATCACTCTAACAAACTCTAGATCTATAGGGAGGATTAGCCGTTAGCTCACGACTAAACAGAACTGCCCGTTCACGAGACTGGGGTGCGCCGGCTCCAAATTTCCCCCAAAATTAGGGCTACCATTTTAGCGTTTCTACCAGCAATTTCACCATGGAATTAACGAAGCTATACGAGCAGCTAAATAAAGCAAATTATAAAAAGATGGAACTGTACAAGAAGGGGCAGGAGAAAGGAGGGGGAGGGTGAGGAGGAGGGGCGACGAGAAGGGAAAGGGAGGGGGGGAGAAGTACTCACGGTCACAGGAGAGGACATGCGAGGAGACGGTCGCCGGGTCTCGCGGGTCGGGCACGGCTGCGGCTGCGGCGCCCAACATACGGGCGGCACGGCCCAGCGAGAGACGCGGCAGGGGGGAGCCAGCGAAACGCTACCGGGGGACCTCTCTGCCCAACTGGGGGTGGATGGGCTCTGTGGTTCCT
More
|
||||||||||
| CDS seq | MVGMYQQQLVEDPFPLSGGYCSDQPRHAPASASTSTSTSSSAAVAASPLAQAHGAGEPRRLFEAFMGEILLPLRGEGGANGGGVGRGPGGVGDLGELLRWTREVAANPVAARPVPAEVKARKRQVLALRRARYLRMEDVANADELPSFFKKRKYRSHNNHAERQKGKGSMNMPTRKSERLAKRMKLMTSVLLTQRKKIGVGEHFQAEVPDWTEPPSDELARYKNDPNISKMLGTRIWPPEGQVLQTDKKIAGQGRMESCNCSYPGSFFCRQHHTDAARDQLRCELGRAFTEWRFDSMGEEVSKMWTREEQLKFNALERLVPVMDHKTFWAVASKHLASKTRIELVRYYLNVFLMRRVLSQCRLNLLEIDSDEDETEEEEDEDQSESTSTSQRTQDAQNVKSIS
More
|
||||||||||
| Protein seq | MVGMYQQQLVEDPFPLSGGYCSDQPRHAPASASTSTSTSSSAAVAASPLAQAHGAGEPRRLFEAFMGEILLPLRGEGGANGGGVGRGPGGVGDLGELLRWTREVAANPVAARPVPAEVKARKRQVLALRRARYLRMEDVANADELPSFFKKRKYRSHNNHAERQKGKGSMNMPTRKSERLAKRMKLMTSVLLTQRKKIGVGEHFQAEVPDWTEPPSDELARYKNDPNISKMLGTRIWPPEGQVLQTDKKIAGQGRMESCNCSYPGSFFCRQHHTDAARDQLRCELGRAFTEWRFDSMGEEVSKMWTREEQLKFNALERLVPVMDHKTFWAVASKHLASKTRIELVRYYLNVFLMRRVLSQCRLNLLEIDSDEDETEEEEDEDQSESTSTSQRTQDAQNVKSIS |
||||||||||
| Function | AT-rich interactive domain-containing protein 2 [UniProtKB/Swiss-Prot:Q9LDD4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsR527G0102697400.01 | OsR527G0102697400.01.T03 | Chr01 | 37923927 | 37930623 | - | IGDBv1 | ||
| CDS seq | ATGGTCGGGATGTACCAGCAGCAGCTCGTCGAAGACCCCTTCCCCCTGAGCGGCGGCTACTGCAGTGACCAGCCACGGCACGCGCCCGCCTCCGCCTCCACCTCCACCTCCACATCCTCGTCAGCTGCCGTTGCAGCCTCGCCGCTGGCGCAGGCGCATGGAGCCGGCGAGCCACGGCGGCTGTTCGAGGCGTTCATGGGGGAGATCCTGCTCCCGCTCCGCGGCGAGGGAGGTGCCAACGGCGGCGGCGTCGGCCGCGGTCCCGGCGGGGTTGGGGATCTGGGGGAGTTGCTGCGGTGGACGCGGGAGGTCGCCGCGAATCCCGTGGCGGCGCGGCCTGTTCCGGCGGAGGTCAAGGCGAGGAAGCGGCAGGTGCTGGCCTTACGGCGCGCTCGCTACCTCAGGATGGAGGACGTTGCGAACGCGGACGAGCTACCCAGCTTCTTCAAGAGCTGGTGA
More
|
|||||||
| Protein seq | MVGMYQQQLVEDPFPLSGGYCSDQPRHAPASASTSTSTSSSAAVAASPLAQAHGAGEPRRLFEAFMGEILLPLRGEGGANGGGVGRGPGGVGDLGELLRWTREVAANPVAARPVPAEVKARKRQVLALRRARYLRMEDVANADELPSFFKSW |
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | None | None | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0852500 | RBH | 1.079138 | 1.600661 | 2.756494 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g63354 | RBH | 0.684479 | 1.009764 | 0.715879 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0852500 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0040550 | RBH | 0.619149 | 7.122203 | 6.437382 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0040030 | RBH | 0.208769 | 0.000000 | 2.417639 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0040430 | RBH | 1.410922 | 6.774677 | 5.467491 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0039900 | RBH | 0.076599 | 0.501176 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0039490 | RBH | 2.683543 | 7.171784 | 12.314040 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0605600 | RBH | 6.0207455 | 19.578375 | 19.9035625 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0039170 | RBH | 0.102203 | 0.477837 | 1.453364 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0604300 | RBH | 7.2780445 | 20.5019155 | 18.851963 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0039530 | RBH | 0.316161 | 0.196931 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0039470 | RBH | 0.294638 | 2.450812 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0039710 | RBH | 3.758888 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0039680 | RBH | 0.581426 | 0.641925 | 0.740845 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0039570 | RBH | 0.510134 | 2.633549 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G040020 | RBH | 0.283351 | 2.765814 | 2.457576 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0039700 | RBH | 1.001501 | 7.287332 | 7.191329 |
| Os XI: R9311 | R9311 | AGIS | R9311C01g04460 | RBH | None | None | None |
| Os XI-adm: HZ | HZ | PKU | OsHZ_01g0465600 | RBH | None | None | None |
| Os XI-adm: J4155S | J4155S | PKU | OsJ4155_01g0468600 | RBH | None | None | None |
| Os XI-adm: LK638S | LK638S | PKU | OsLK638S_01g0442400 | RBH | None | None | None |
| Os XI-adm: XL628S | XL628S | PKU | OsXL628S_01g0471400 | RBH | None | None | None |
| Os GJ-temp: 02428 | 02428 | SICAU | Os02428G0101418600.01 | RBH | None | None | None |
| Os cB: Basmati1 | Basmati1 | SICAU | OsBasmati1G0105000400.01 | RBH | None | None | None |
| Os O.glaberrima: Ogla | OglaRS2 | DIADE | Oglab_004352 | RBH | None | None | None |
| Os XI-1A: CN1 | CN1 | SICAU | OsCN1G0104570600.01 | RBH | None | None | None |
| Os XI-1A: D62 | D62 | SICAU | OsD62G0104661600.01 | RBH | None | None | None |
| Os XI-1A: DG | DG | SICAU | OsDGG0101622200.01 | RBH | None | None | None |
| Os GJ-temp: DHX2 | DHX2 | SICAU | OsDHX2G0101419200.01 | RBH | None | None | None |
| Os XI-adm: FH838 | FH838 | SICAU | OsFH838G0100887000.01 | RBH | None | None | None |
| Os XI-1A: FS32 | FS32 | SICAU | OsFS32G0101525000.01 | RBH | None | None | None |
| Os XI-1A: G46 | G46 | SICAU | OsG46G0101629200.01 | RBH | None | None | None |
| Os XI-adm: G630 | G630 | SICAU | OsG630G0101406600.01 | RBH | None | None | None |
| Os XI-1B: G8 | G8 | SICAU | OsG8G0101395800.01 | RBH | None | None | None |
| Os XI-1A: II32 | II32 | SICAU | OsII32G0104643800.01 | RBH | None | None | None |
| Os XI-1B: J4155 | J4155 | SICAU | OsJ4155G0101399800.01 | RBH | None | None | None |
| Os GJ-temp: Kosh | Kosh | SICAU | OsKoshG0101407000.01 | RBH | None | None | None |
| Os GJ-temp: KY131 | KY131 | SICAU | OsKY131G0101068200.01 | RBH | None | None | None |
| Os GJ-trp: Lemont | Lemont | SICAU | OsLemontG0101435800.01 | RBH | None | None | None |
| Os GJ-adm: LJ | LJ | SICAU | OsLJG0101409800.01 | RBH | None | None | None |
| Os GJ-sbtrp: NamRoo | NamRoo | SICAU | OsNamRooG0101416800.01 | RBH | None | None | None |
| Os XI-1B: R498 | R498 | SICAU | OsR498G0102348400.01 | RBH | None | None | None |
| Os XI-1B: R527 | R527 | SICAU | NA | NA | NA | NA | NA |
| Os XI-1B: S548 | S548 | SICAU | OsS548G0107543400.01 | RBH | None | None | None |
| Os XI-2: TM | TM | SICAU | TMG0101422200.01 | RBH | None | None | None |
| Os XI-3: Tumba | Tumba | SICAU | OsTumbaG0101372600.01 | RBH | None | None | None |
| Os XI-adm: WSSM | WSSM | SICAU | OsWSSMG0101381000.01 | RBH | None | None | None |
| Os XI-1B: Y3551 | Y3551 | SICAU | OsY3551G0101406600.01 | RBH | None | None | None |
| Os XI-1B: Y58S | Y58S | SICAU | OsY58SG0101409200.01 | RBH | None | None | None |
| Os XI-adm: YX1 | YX1 | SICAU | OsYX1G0101415400.01 | RBH | None | None | None |
| Os GJ-temp: ZH11 | ZH11 | SICAU | OsZH11G0101408800.01 | RBH | None | None | None |
