Rice Gene Index: a comprehensive database for homology, collinearity, and transcripts of genes in rice pangenome.

Variation ID: HZ_Y3551_DEL0130670

Variant Type:

Ref Genome:

Query Genome:

Chromosome:

Ref Start:

Ref End:

DEL

Chr01

43380474

43380709

SV Length:

Query Start:

Query End:

Allele sv Count:

237 bp

37968484

37968720

14

Gene_id	Chromosome	Start	End
OsY3551G0101406600.01	Chr01	37960282	37969958

SV_id	Chromosome	ref_start	ref_end	query_start	query_end	length
HZ_125827_DEL0137560	Chr01	43380474	43380709	38390604	38390840	237
HZ_127518_DEL0137810	Chr01	43380474	43380709	38360544	38360780	237
HZ_127742_DEL0122500	Chr01	43380474	43380709	37861026	37861262	237
HZ_132424_DEL0135070	Chr01	43380474	43380709	37981632	37981868	237
HZ_FH838_DEL0129500	Chr01	43380474	43380709	38351261	38351497	237
HZ_G630_DEL0128310	Chr01	43380474	43380709	38274017	38274253	237
HZ_IR64_DEL0122780	Chr01	43380474	43380709	37907637	37907873	237
HZ_J4155_DEL0128890	Chr01	43380474	43380709	38145236	38145472	237
HZ_J4155S_DEL0131290	Chr01	43380474	43380709	38621817	38622053	237
HZ_Lemont_DEL0160510	Chr01	43380474	43380709	37755494	37755730	237
HZ_R527_DEL0127110	Chr01	43380474	43380709	37929114	37929350	237
HZ_Y3551_DEL0130670	Chr01	43380474	43380709	37968484	37968720	237
HZ_Y58S_DEL0134290	Chr01	43380474	43380709	37082305	37082541	237
HZ_MH63RS3_DEL0129620	Chr01	43380474	43380709	38545514	38545750	237

>HZ_Y3551_DEL0130670
GTTCGGCTGAGAGCGTTCCCAGCGCGCACAGTAAACACGGAAAACGGAGCGGTCATTAGCGCGTGATTAATTAAGTATTAGCTAATTTTTTTTAAAAAAATGGATTAATTTGATTTTTTTTAAACAACTTTTGTATAGAAACTTTTTGCAAAAAAATGCACCGTGTAGTAGTTTGAAAAGCGTGCGCGGACGAAAAGTTACTGTGCACGCCGGGAAAACAGCTGCCGAACACAGCCT