Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_02g0004070 | OGI:02001240 | 16/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr02:2899021-2900215 | ||||||||
| Gene Symbol | LRK3, OsLRK3, OsPSKR7, PSKR7 | ||||||||||
| DNA seq | tcaaatttctattttctttgtcaactctccatgaagcttgtttgtggatagccgcaaccaagtcaaattactgcatgagtagatgcTttctggaattgtgccaatgAagtaatttgaagataaatctaaaattttcagattgggcAaggtggagaagttaaccttggcaagctctcccttcaacttaTttttcttgaggttcatggtaactagatttgtgcaatcgcccaaggatGgtggcagCTctccagatAtgttgttttcttccatgtgaagtacttctagtctcttcagttgaccTatagaatctgggattttgccactgaatctgttcccaCcaagatcAagaaaaactagattactgagctttatcattagtgcatcgtcaattattCcttgcaagtggttattagtaaaggagaggtactccaatgaggtggctctgaagagatcatctggcagggtcccaatgatgttgttttggccaaccctgagcattctaagggaagagcatttacctattccaGgggggatgctgccactgaattggttgtaagaaaggtcaagcacagcaaaggatggtgagctgatgcagaaagaggaaggtaTgtgcccactaaaactgttgttgctcgcgttgattgctaccaggttgctcattttctcccatgttgtggagggaaatgctcccgtAaaACAGGTTGCTTGAGATATTCAGTACCTGGAGAGGCCGGTCAGGTGATGACGAATTCAGCTCCTGCAATTCTCCATCCAGGCGGTTGAAGCTGACATCAAGGACGACAATGCTGCTGAATATCAGCTCTGATGGAAGCTCACCGGAGAGTAAGTTGTATGACAGGTTGAGTCGCGACAAGCTGGTGAGCTCGCTCAGGGATGATGAGATGCACCCTTGTAGGCCTCTTGAGGCCAGTAATAGCTCAGTTACTGCACCATCTTCTCCACAGATGATCCCTTCCCAGGTGCAGCAATCTGTACTATTCTGCCATGATGCAGCGAGGCCACCATCCTGCGATAGCCCGGTGAGGAACCGGAGGAGGGAGCGCCTCTCCCTCTCGGTGCATGAACCGACAGGGGAGATGAAGGTGAATAGCAGCAACACAAGAACAGGGCCAAAGAAATTTATGCAAAACTTGCTGGTGTTGGTTCTGCATGAAGAATGTGGTATTGGCTTCAT
More
|
||||||||||
| CDS seq | ATGAAGCCAATACCACATTCTTCATGCAGAACCAACACCAGCAAGTTTTGCATAAATTTCTTTGGCCCTGTTCTTGTGTTGCTGCTATTCACCTTCATCTCCCCTGTCGGTTCATGCACCGAGAGGGAGAGGCGCTCCCTCCTCCGGTTCCTCACCGGGCTATCGCAGGATGGTGGCCTCGCTGCATCATGGCAGAATAGTACAGATTGCTGCACCTGGGAAGGGATCATCTGTGGAGAAGATGGTGCAGTAACTGAGCTATTACTGGCCTCAAGAGGCCTACAAGGGTGCATCTCATCATCCCTGAGCGAGCTCACCAGCTTGTCGCGACTCAACCTGTCATACAACTTACTCTCCGGTGAGCTTCCATCAGAGCTGATATTCAGCAGCATTGTCGTCCTTGATGTCAGCTTCAACCGCCTGGATGGAGAATTGCAGGAGCTGAATTCGTCATCACCTGACCGGCCTCTCCAGGTACTGAATATCTCAAGCAACCTGTttTacgggagcatttccctccacaacatgggagaaaatgagcaacctgcaatcaacgcgagcaacaacagttttagtgggcacAtaccttcctctttctgcatcagctcaccatcctttgctgtgcttgacctttcttacaaccaattcagtggcagcatcccccCtggaataggtaaatgctcttcccttagaatgctcagggttggccaaaacaacatcattgggaccctgccagatgatctcttcagagccacctcattggagtacctctcctttactaataaccacttgcaagGaataattgacgatgcactaatgataaagctcagtaatctagtttttctTgatcttgGtgggaacagattcagtggcaaaatcccagattctatAggtcaactgaagagactagaagtacttcacatggaagaaaacaacaTatctggagAGctgccacCatccttgggcgattgcacaaatctagttaccatgaacctcaagaaaaAtaagttgaagggagagcttgccaaggttaacttctccacctTgcccaatctgaaaattttagatttatcttcaaattactTcattggcacaattccagaaAgcatctactcatgcagtaatttgacttggttgcggctatccacaaacaagcttcatggagagttgacaaagaaaatagaaatttga
More
|
||||||||||
| Protein seq | MKPIPHSSCRTNTSKFCINFFGPVLVLLLFTFISPVGSCTERERRSLLRFLTGLSQDGGLAASWQNSTDCCTWEGIICGEDGAVTELLLASRGLQGCISSSLSELTSLSRLNLSYNLLSGELPSELIFSSIVVLDVSFNRLDGELQELNSSSPDRPLQVLNISSNLFYGSISLHNMGENEQPAINASNNSFSGHIPSSFCISSPSFAVLDLSYNQFSGSIPPGIGKCSSLRMLRVGQNNIIGTLPDDLFRATSLEYLSFTNNHLQGIIDDALMIKLSNLVFLDLGGNRFSGKIPDSIGQLKRLEVLHMEENNISGELPPSLGDCTNLVTMNLKKNKLKGELAKVNFSTLPNLKILDLSSNYFIGTIPESIYSCSNLTWLRLSTNKLHGELTKKIEI |
||||||||||
| Function | Receptor-like protein 3 [UniProtKB/Swiss-Prot:Q9SHI4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_02g0004070 | OsNaBo_02g0004070.01 | Chr02 | 2899021 | 2900215 | - | NAM | ||
| CDS seq | ATGAAGCCAATACCACATTCTTCATGCAGAACCAACACCAGCAAGTTTTGCATAAATTTCTTTGGCCCTGTTCTTGTGTTGCTGCTATTCACCTTCATCTCCCCTGTCGGTTCATGCACCGAGAGGGAGAGGCGCTCCCTCCTCCGGTTCCTCACCGGGCTATCGCAGGATGGTGGCCTCGCTGCATCATGGCAGAATAGTACAGATTGCTGCACCTGGGAAGGGATCATCTGTGGAGAAGATGGTGCAGTAACTGAGCTATTACTGGCCTCAAGAGGCCTACAAGGGTGCATCTCATCATCCCTGAGCGAGCTCACCAGCTTGTCGCGACTCAACCTGTCATACAACTTACTCTCCGGTGAGCTTCCATCAGAGCTGATATTCAGCAGCATTGTCGTCCTTGATGTCAGCTTCAACCGCCTGGATGGAGAATTGCAGGAGCTGAATTCGTCATCACCTGACCGGCCTCTCCAGGTACTGAATATCTCAAGCAACCTGTttTacgggagcatttccctccacaacatgggagaaaatgagcaacctgcaatcaacgcgagcaacaacagttttagtgggcacAtaccttcctctttctgcatcagctcaccatcctttgctgtgcttgacctttcttacaaccaattcagtggcagcatcccccCtggaataggtaaatgctcttcccttagaatgctcagggttggccaaaacaacatcattgggaccctgccagatgatctcttcagagccacctcattggagtacctctcctttactaataaccacttgcaagGaataattgacgatgcactaatgataaagctcagtaatctagtttttctTgatcttgGtgggaacagattcagtggcaaaatcccagattctatAggtcaactgaagagactagaagtacttcacatggaagaaaacaacaTatctggagAGctgccacCatccttgggcgattgcacaaatctagttaccatgaacctcaagaaaaAtaagttgaagggagagcttgccaaggttaacttctccacctTgcccaatctgaaaattttagatttatcttcaaattactTcattggcacaattccagaaAgcatctactcatgcagtaatttgacttggttgcggctatccacaaacaagcttcatggagagttgacaaagaaaatagaaatttga
More
|
|||||||
| Protein seq | MKPIPHSSCRTNTSKFCINFFGPVLVLLLFTFISPVGSCTERERRSLLRFLTGLSQDGGLAASWQNSTDCCTWEGIICGEDGAVTELLLASRGLQGCISSSLSELTSLSRLNLSYNLLSGELPSELIFSSIVVLDVSFNRLDGELQELNSSSPDRPLQVLNISSNLFYGSISLHNMGENEQPAINASNNSFSGHIPSSFCISSPSFAVLDLSYNQFSGSIPPGIGKCSSLRMLRVGQNNIIGTLPDDLFRATSLEYLSFTNNHLQGIIDDALMIKLSNLVFLDLGGNRFSGKIPDSIGQLKRLEVLHMEENNISGELPPSLGDCTNLVTMNLKKNKLKGELAKVNFSTLPNLKILDLSSNYFIGTIPESIYSCSNLTWLRLSTNKLHGELTKKIEI
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 1.653998 | 1.300614 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0155900 | SBH | 1.346298 | 0.557559 | 0.263913 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g06070 | SBH | 0.076225 | 0.0 | 0.070212 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0155900 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0004250 | SBH | 0.0 | 0.580820 | 0.631681 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0004260 | SBH | 0.069201 | 0.845967 | 0.776244 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0004170 | RBH | 0.137843 | 1.557139 | 0.736899 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0004250 | SBH | 0.061636 | 0.022630 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0004280 | SBH | 1.714308 | 1.291915 | 1.010436 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0051300 | RBH | 0.3972695 | 1.3156905 | 1.0603295 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0004280 | SBH | 0.048594 | 0.017924 | 0.096358 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0053900 | SBH | 1.113259 | 1.3618645 | 4.3326725 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0004220 | RBH | 0.034492 | 0.108827 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0003980 | SBH | 0.070042 | 4.234505 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0004560 | SBH | 8.232897 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0004210 | SBH | 0.087713 | 0.227309 | 0.100002 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0004260 | SBH | 0.050727 | 0.312735 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G004310 | SBH | 0.850914 | 0.737580 | 0.524094 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0027120 | SBH | 0.0 | 2.179937 | 0.302101 |
