Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| Os02g0155900 | OGI:02001240 | 16/16 | Nipponbare | IRGSP 1.0 | RAP-db | Chr02:3065811-3072625 | ||||||||
| Gene Symbol | LRK8, OsLRK8, OsPSKR1, PSKR1, LRK5, OsLRK5, OsPSKR5, PSKR5, - | ||||||||||
| DNA seq | TTAACCGAAAATATCTAGATACAACTATCTGATCATATAGCACTCCAATTCCAAAGAATACACAAAAAGCAATCACAGGGATGACCTTGTTGATGTAATCTTTTTTTGAGCTTGGGGGAGACAAATCTGCTTCTGCTACATTGCAACGGTGCAAAAGCATCGGGCTGCATAGCTCTGGGTTTCCAGCAAAACTAGAACTTGGAAATGTGCTGAACTGGCCTCCAATTGGTACAGACCCTTTTAGATCATTGTAGGAAACATTGAATTCAGAAAGGAAGTGAAGGTTCACCAGTGCTGGAGGGATTGCACCTGTCAGATGGTTGTATGACAGGTCTAGAACCATCAGATTCTTGAGGTTGCTGATCGATTGTGGGATCTCCCTGTTTAGGTTGTTGAAGCTCAAGTCGAGTGAAACGAGTGCTTTCAACTCACCAATCTCCATCGGGATCACACCAGTGAATTTGTTATTACCTAGATTCAACATTTTAGGGAAAGCAGTAACTATACGGTACTGAAAACACAGACATGCGCCTGCATACACTGGAAACGGAAAGGCTCTTGGGTCTGAGTGTAGAAGGAGATTTGGATCAACCGTAACTTTCATTGATCAATGGAGCTTATATTTATACATGTACAACAAGGCTTGGGAGTTGCCTGGGCCTAACTAATCCCCTGATCTAAGGGACGTGCAGCGGTGCGAGCGGAGCGAGGAGCGCGGCGTCGTGCGCGGGGTGCGCGTCGTGCGCGTGGAGCGCGCCTCGAGAGTCTGACGAAGCCGTTCGCCAACACCCCCCCGCAGTCGCAGCCGTCGTATCACCGACGCAGAGACTGGCTCGGAACTCGTTGAACATGCTTGAAGGAAGCCCTTTTGTGAACACATCCGCGAACTGATGGGCACTCGGTATCGGTAGGACGCGGAGTTCACCGAGCGCGACCTTCTCCCTGACGAAGTGGATGTCGAGCTCGATGTGTTTGGTCCGCTTGTGGTGCACCGGATTCTTGGACATGTAGACGCTGGAGATGTTGTCACAGTAAGCGATCGTCGCCTGTGGAACGCGGCAGTGGAGTTCACCGAGCAGCTGGCGCAACCAAGTGCACTCCGCCACCGCGTTCGCCACACCTCTGTACTCGGCTTCCGCACTTGACCTCGAGACGGTCGTCTGCCGCTTGGACGACCAGGAGATGAGGGAGTCGCCGAGGAAGATGCAAAAGCCGGACGTGGAACGCCGGGTGTCGGGGCAGCCGGCCCAATCTGCGTCGCTGAAGGCGGTGAGCGTCGGCGACGTCGAGGCGCGAAGGTGTAAGCCAAACGCGGCCGTTCCCTTGATGTAGCGCAGGATCCGCTTCAGCAGGGTGACGTGAGCTTCGCGCGGAGCATGCATGTGCAAGCACACCTGCTGGACGGCGTAGGCGATGTCGGGCCGCGTCAAGGTCAGGTACTGGAGAGCGCCGGCAATGCTGCGGTACCAGGAGGAGTCCTGGAAGAGAGGCCCCTCGTCGCTTGACAGCTTGGGTTTAGCGTCCGCCGGAGTGTCCACGGCCTTGCAGTTCGCCATGCCTGCACGTTCGAGGACATCGGTGGCGTACTTGGACTGGCTGAGGACGAACCCGTCGGCAGTGCGCTGAACTTCGATGCCGAGGAAGTACTTCAGGGGCCCCATGTCCTTGACCTTGAACTCCGCTTGAAGGCGATCGATGATGCGCTGCAGCAAGCTCGACGAGGACGCGGAGAGGATCATGTCGTCGACGTAGAGGAGGAGGTAGGCCGTGTCGGAGCCACGGCGCAGCACGAACAGGGAGGGGTCGGCGCGGGACTGGACGAAGCCGAGGCTGGTTGCATGATCGGCGAAGCGCTTGAACCAAGCGCGCGGGGCTTGACGAAGACCGTACAGCGAACGGGAGAGGAGGCACACGTCCGCCGGGCGAGCAGCATCCTCAAAGCCTGTGGGCTGCTGGCACAGGACACGTTCCTGAAGATGGCCGTGCAGGAACGCGTTTGAAACGTCCAGTTGATGCGCCGGCCATTGCTTGGAGGAAATCAGCGTCAGCACGGTGCGAATGGTCGCTGGTTTGACGACGGGCGAGAATGTCTCGCCAAAGTCGACGCCCGGGCGCTGGTTAAACCCGCGAACCACCCAACGTGCCTTGTACTTGTCGAGTGAGCCGTCAGCATGAAGCTTGGTCTTGAAGACCCACTTGCCGGTGATGATCCGAGCACCGGGAGGCCGGGGAACCAGAGTCCACGTCCTGTTCGCGAGCAGGGCGTCGAACTCAGCCTGCATCGCCGCGCGCCAGTTGGGATCCCGGAGCGCCGCGCGAACAGACGAAGGTGTCGGCGACAGGGTCGACGTGGCAGTCATGGCGTACCGCGGGTTGGGTTTGCTGATCCCAGCCCGCGCACGCGTCGTCATGGCGTGTCGAGGTGGAGAGGCGGACGCTGGCGACGACGTCTCGGGTGATGGAGGCGGCGCGACGTCGTGGGCCGGAGCAGCACTGCTGGGCGTGGACGACGCGGGCGACGGAGGCGATGCGGCGTCGTGAGCTGGGGCGGTGCCGACAGGTGTGACGACGTGCTGTGCTGGAGCAGGCAGCAGCACAATAGTGTCATCGCCGTGGTCCGGTGGCGGAGGAGCTGACGGGCGAGGCGATGGCACGTCGCGGAAGGGGAACACGTCCTCGACGAACGTGACGTGGCGCGACGTGAACACCCGGCGGGAGACCATGTCGTAGCAGCGATAGCCACGATGGTCAGCCGGGTAGCCGATGAAGACGCACGCCAGGGATCGCGGGCTGAGCTTGTGCGGCGCTGTCGCGATGGTGTTGGGGTAGCAGAGGCAGCCGAACACGCGAAGATGATCGTACGTCGGGGGAGCGCCGAGCAGCAGCTGGTACGGCGTGAGGGAGCCCGTGGCGCGGCATGGCCGTCGGTTGATCAGATGCGTCGCCGTCTGCAAGGCTTCAGCCCAAAAAGACAAAGGAGCAGCGCTGTGAACAAGCATTGTGCGCACGCAGTCATTGATCGTCCGGAGGATACGTTCCGCCTTGCCATTCTGTTGAGAGGAATAGGGGCAGGAGAGGCGAAGAACAGCTCCGTGGAGAGACAGGAGTGAGCGAAGTGCATAAGAATCGTATTCCTTGCCATTGTCAGTTTGCAGAGCTAAAACGGGGAGCCCGAACTGTGTGTGTGCATAAGCAAAGAAGGAACGAACAGTATGAAACACCTCAGATTTATTGCGAACAGGAAAGGTCCAAATATAGTGTGTAAAATCATCAAGAAATACCACATAATACTTGTAACCGGAATTGCTATAAATGGGAGAGGTCCAAACATCTGTATGCACTAACTGAAAGGGAAATAGAGTCTGACTAGATGAAGAGTGGAAAGGAAGCCGCACATTCTTGCCTACATGACAAGCAGAACAGTGATGGGGGGCTGATTTATTACATTGGAAATCAAAGGAACCAAGAACCTTGGACAGGGAAGCAGAGCCAGGGTGCCCGAGCCGCAGATGCCAATGCTCCACCGACGGCGAGGAAGTCGCAGAGAGGGCGTGTGGCGATGGCAGACGCAGGGGGTACAGGTCACCCGGGCTGTCACAGCGGAGCTTCACCACCTGAGTTTGAAGATCCTTGATGGAGAAACCAGTTGGATCAAATTCAATGGAGACATTATTATCACGAGTTAGCTTTTTCACAGAGATCAAATTCTTAATCAAGGGAGGAGAAACAAGCACGTTATGAAGGTGTAGATCAGTGGAGGATGTGGGAATGTGGGTGGAAGCTGTATGCGTGACAGGCAGCTTGGCACCATTGCCGACAGTGATACAAGAGGAGAAAGGAAGAGGACGGGGATGAGCAAGAATACCAGGGGTGGAGGACATATGTGCTGACGCACCGGTGTCGAGGAACCAATCCGCAGCGCTCGGAGGAGTGGTGGTGGCGACGCCGGCGGACTGCAAGGCGCTGTAGAGCGCACTGTTGTCCCAGGCGCCGGTGGATTGAACTCCTGGAGATGCCGGAGGAAGAGCCGGAAGCAGGTGCTGCGCGGTCATGGCCTGTTGGGCCTGGAACGGCGGGCGAGGGCCCAACACACCCGCGCCGGGAGCCCGGAACGGGAAAGGCCAGGCCTGGACAAAGCCTGTCCAGGGGTTGTAGCCCCAAGGCGCAGGAGGGCGAGGCTGGCCGTCGTGCCCGGCACCAGCGCCGCCGCCAGGAGTCGAAGGAGCGCCGCCAGGTGGGGCGCCGCCGCCCCGGCCACGACGCTTGCCCCGTCCCTTGGGACGAGGCTGGCCGGTGGTGTCGGAGGTGCCGGAGGAAGACCCGGTGCCGGCGTAGAGGGCCTCCCCGGCTTCAGCCTTGGCGTCGTGCTGCATCTGGAGCTCCGCCAGCAGCAGGTAGGAGCGCGCGGTCATGAAAGTGTGTGGCGGATTCCGGTCGGCGAAGCTGGCGCGGAGGGAGCGGAACTTGGTGTTGAGGCCGCGCAGGAGGTTGAGCACCTGGCTGGGCTCAGACACGGGCATGTTGATGTCGCGGAGGCCGTCGGCGAGTTGCTTCAGCTTGGCGGTGTACTGCGTGATGGTCATGTCACCTTGATTGATCGAGCGGAACTCGGTCTCAAGGTAGACAGACCGTTGGACGGCGTTGTCACGGAAGACGCCTTCGATGTCGCTCCACACGGTGAAGGCAGAGGCGCGGGGCTTGTAGACGACGTCGAAGACGTTCTTGGCGATGGAGTTGTGCAGCCAATTGACCACGCAGTGATCCGCACGGCGCCACTCGGCAGTGCGGAGGTCGAGAGCGGGCGGCTCCTGAACATGGGCCTCAAGGCCGAACTTGCCGAGGACCGATTCGAAGCTGTAGCGCCACTGGCTGTAGTTGGAGACGTCGAGATCGAGGACGACCGGGACGTGGGAGCGGATGTTGACGGTTTGAAGAACAGAGGTGGAAGGCGCCGGCACAGGCTCTTCGTCAGAGGTGGACGAGGCGTCGGAAGCGCCGGAGCTGTGCGACATGGCTAGCAAGGGAGAGGTAGCGGAAGACTAAGATCAGAGGGTCACTGATACCATGTAGAAGGAGATTTGGATCAACCGTAACTTTCATTGATCAATGGAGCTTATATTTATACATGTACAACAAGGCTTGGGAGTTGCCTGGGCCTAACTAATCCCCTGATCTAAGGGACGTGCAGCGGTGCGAGCGGAGCGAGGAGCGCGGCGTCGTGCGCGGGGTGCGCGTCGTGCGCGTGGAGCGCGCCGCGAGAGTCTGACGAAGCCGTTCGCCAACACTGAGTTATCTGCAATCTTATCTGATTTTAGCATTGGTATCTCCATTAGTGCTTGTGGTATTTCTCCTGAAAGGCTATTATTGGATATGTCTACATACTTAAGGAAGTTTAGGCTATTGATCCAGGTTGGTATAGGTCCACTGAGTTAATTGTTGGATAAATCTAAAACTGCCAAATTTCCGAGCTTTGAGAGCCAACTAGGTATTTTTCCAGTCAATGCACAATCATGTATGCTAATACCAAAAATATTCTCGAAACCATCAATTGTTTCATCCTGTGGCATAGCTTCGTGCATGAAGTTGCCCCCAATTAACAAGACATTGAGGTTCCTTAAGCTCTTGAGTATGTGAAGAGTATTTTTGATATCTGTAAAATTGTTGTAGGAAAGAGATAAGAAGGTGATAGAATTCAGATTCCGTATGTTTTTTGTCAACTGGCCGTGAAGCCTATTGGAAGATAGCCGCAACCAAGTCAAATTACTACATGAGTATATGCTTTCTGGAATTGTGCCGGTGAAGTGATTCGAGGCAAAATCTAATGTTTTCAGATTGGGTAGATTGGAGTAGTTAACCTTGGCAAGCTCACCCGTCAACTTGTTTCTCCTGAGGTTGATGGTTACTAGATTTGTGCAATCTCCCAATGATGATGGCAGCTCTCCAGATAAGTTGTTGCTGCAAATGTGAAGCTCCTCTAGTCTTTTCAACTAGCCTATAGAATTTGGGATCTTGCCACTGAATCTATTCCATCGAAGATCAACAAAAACAAGATTGATGAGCTTTACGATGAGAGCATCATCAATTGTTCCTTGCAACCCATTGTTAGCGAAAGAGAGGTACTCCAATGATGTGGCATTGAAGAGATCACCTGGGAGAGGCCCTCTGATGTTGTTGGCATTAGCCTTGAGAAGTCTAAGGGCAGAACATTTACCTATTCCAGGGGGGATGTTGCCACTGAACTGGTTGTACCCAAGATCAAGAACAGCAAAAGATGTCGAGCTGCTGCAGAAGGAGGAAGGTATGTGCCCTGTAAAACTGTTGTTGCTCGCGTTGATTGCGACCAGGTTCCTCATTTTCTCCCATGTGATGGATGGAAACTCTCCTGTAAACCGGTTGCTTGAGATATTCAGTACCTTCAGTGGCTGGTTAGATACTGATGGATTCAACTCTTGCAGGTCCCCGTTGAGGCGATTGAAGCTGACATCAAGGACGACGATGCTGCCAGAGGACATCAACTCTGCTGGAAGGCTACCAGATAGGGAGTTGTACGACAGGTTGAGGCGCGACAAGCTGGTGAGCTCTCCCAGTGACGGTGAGATTTGCCCTTCGAGGCCTTTTGAGGCTAGATGTACCTCAATTACAGCCCCATCTTCGTTGCAGGTGATGCCTTCCCACAACAGCAGTCCATGCCATTCTGCCATGACATGGCGATGCCACCGTCTTGCGACAGCTCAGCAATGAACCGGAGGAGGGAGCTCTTCTCCTGCTCGACGCAAGCCATGGCGGAGGTGGCCACGATGAGAAGCAGCAGTAGC
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| CDS seq | ATGGCAGAATGGCATGGACTGCTGTTGTGGGAAGGCATCACCTGCAACGAAGATGGGGCTGTAATTGAGGTACATCTAGCCTCAAAAGGCCTCGAAGGGCAAATCTCACCGTCACTGGGAGAGCTCACCAGCTTGTCGCGCCTCAACCTGTCGTACAACTCCCTATCTGGTAGCCTTCCAGCAGAGTTGATGTCCTCTGGCAGCATCGTCGTCCTTGATGTCAGCTTCAATCGCCTCAACGGGGACCTGCAAGAGTTGAATCCATCAGTATCTAACCAGCCACTGAAGGTACTGAATATCTCAAGCAACCGGTTTACAGGAGAGTTTCCATCCATCACATGGGAGAAAATGAGGAACCTGGTCGCAATCAACGCGAGCAACAACAGTTTTACAGGGCACATACCTTCCTCCTTCTGCAGCAGCTCGACATCTTTTGCTGTTCTTGATCTTGGGTACAACCAGTTCAGTGGCAACATCCCCCCTGGAATAGGTAAATGTTCTGCCCTTAGACTTCTCAAGGCTAATGCCAACAACATCAGAGGGCCTCTCCCAGGTGATCTCTTCAATGCCACATCATTGGAGTACCTCTCTTTCGCTAACAATGGGTTGCAAGGAACAATTGATGATGCTCTCATCGTAAAGCTCATCAATCTTGTTTTTGTTGATCTTCGATGGAATAGATTCAGTGGCAAGATCCCAAATTCTATAGGCTAG
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| Protein seq | MAEWHGLLLWEGITCNEDGAVIEVHLASKGLEGQISPSLGELTSLSRLNLSYNSLSGSLPAELMSSGSIVVLDVSFNRLNGDLQELNPSVSNQPLKVLNISSNRFTGEFPSITWEKMRNLVAINASNNSFTGHIPSSFCSSSTSFAVLDLGYNQFSGNIPPGIGKCSALRLLKANANNIRGPLPGDLFNATSLEYLSFANNGLQGTIDDALIVKLINLVFVDLRWNRFSGKIPNSIG |
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| Function | Receptor-like protein 3 [UniProtKB/Swiss-Prot:Q9SHI4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| Os02g0155900 | Os02t0155900-00 | Chr02 | 3065811 | 3072625 | - | irgsp1_rep | ||
| CDS seq | ATGGCAGAATGGCATGGACTGCTGTTGTGGGAAGGCATCACCTGCAACGAAGATGGGGCTGTAATTGAGGTACATCTAGCCTCAAAAGGCCTCGAAGGGCAAATCTCACCGTCACTGGGAGAGCTCACCAGCTTGTCGCGCCTCAACCTGTCGTACAACTCCCTATCTGGTAGCCTTCCAGCAGAGTTGATGTCCTCTGGCAGCATCGTCGTCCTTGATGTCAGCTTCAATCGCCTCAACGGGGACCTGCAAGAGTTGAATCCATCAGTATCTAACCAGCCACTGAAGGTACTGAATATCTCAAGCAACCGGTTTACAGGAGAGTTTCCATCCATCACATGGGAGAAAATGAGGAACCTGGTCGCAATCAACGCGAGCAACAACAGTTTTACAGGGCACATACCTTCCTCCTTCTGCAGCAGCTCGACATCTTTTGCTGTTCTTGATCTTGGGTACAACCAGTTCAGTGGCAACATCCCCCCTGGAATAGGTAAATGTTCTGCCCTTAGACTTCTCAAGGCTAATGCCAACAACATCAGAGGGCCTCTCCCAGGTGATCTCTTCAATGCCACATCATTGGAGTACCTCTCTTTCGCTAACAATGGGTTGCAAGGAACAATTGATGATGCTCTCATCGTAAAGCTCATCAATCTTGTTTTTGTTGATCTTCGATGGAATAGATTCAGTGGCAAGATCCCAAATTCTATAGGCTAG
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| Protein seq | MAEWHGLLLWEGITCNEDGAVIEVHLASKGLEGQISPSLGELTSLSRLNLSYNSLSGSLPAELMSSGSIVVLDVSFNRLNGDLQELNPSVSNQPLKVLNISSNRFTGEFPSITWEKMRNLVAINASNNSFTGHIPSSFCSSSTSFAVLDLGYNQFSGNIPPGIGKCSALRLLKANANNIRGPLPGDLFNATSLEYLSFANNGLQGTIDDALIVKLINLVFVDLRWNRFSGKIPNSIG
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | None | None | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0156200 | RBH | 0.250807 | 0.765182 | 1.044408 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g06180 | SBH | 0.178056 | 0.515403 | 0.284927 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os06g0691800 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0004110 | RBH | 0.065531 | 3.759906 | 0.712820 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0004550 | RBH | 0.062422 | 0.174184 | 0.148208 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0004320 | SBH | 0.525950 | 0.000000 | 0.368036 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0004170 | RBH | 0.000000 | 0.012273 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0004230 | RBH | 1.051280 | 0.000000 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0050200 | RBH | 0.852885 | 2.079683 | 1.239989 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0004220 | SBH | 0.0 | 0.035502 | 0.217687 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0054800 | RBH | 0.5707365 | 1.043263 | 0.1931665 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0004620 | SBH | 0.050025 | 0.093740 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0004180 | SBH | 0.000000 | 2.380328 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0004440 | RBH | 0.000000 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0004390 | SBH | 0.000000 | 0.000000 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0004260 | SBH | 0.050727 | 0.312735 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G004250 | RBH | 0.0 | 0.0 | 0.210427 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0004260 | SBH | 0.000000 | 0.353235 | 0.384476 |
