Rice Gene Index (RGI): a comprehensive pan-genome database for comparative and functional genomics of Asian rice.

Basic Info

Gene ID		OGI # \| Score			Accession \| Assembly \| Annotation			Location		Links
OsNip_02g0154200		OGI:02002350 \| 2/16			Nipponbare \| IRGSP 1.0 \| Gramene(+IsoSeq)			Chr02:2978855-2982356		Homologues MicroCollinearity RGI-JBrowse
Gene Symbol		LRK1, OsLRK1, OsPSKR9, PSKR9
DNA seq		CATGAACTCTTATCTACTACTACTAATATAGTGAACGGCAATGCCTCAAAATGACATTAGTCTGACATAAGCTGTACAGAATGAACTAAAAGACCAATCAGAAATACTAGCACTAGTGAGACTAGATCAACTCAGTTCACTGAAAGTACAAGATTATTTGTCATATTATTGTATCTTTAGGTCAGGCCGTCAGGGTCTATACTGTGCAGACTGGCTACTACTTCTATCATAGTAGGCCTCCGCAAAGGATCACCTTTGACACACTTGCAAGCAATTTCAAGGACCTTTAGCATTTGCTCTTCACACCCTGTGCCTTGAAATGTTAAATCCAGCACCTCAATCTGCTTTCCATTTGATACCATCTCCTGTACCCATGGGACAAGTTCCTTTGAGGTAGACAGTATCGGAACTGGCCTCCTCCCAGTGAGAAGCTCAAGCAGGACCACTCCGAAACTGTATACATCACCTTTCAATGTAGCAACCCATGCCTGGGCGTACTCAGGTGGGATGTAACCAAGAGTGCCAACTAGCTCAGTTGTGACATGAGTTTTGTTGGGAAGGATCAACCGTGATAATCCAAAATCTGCAATATAAGCTTTGAATTCTTTGTCGAGAAGGATGTTGCTAGATTTGATGTCACGGTGGACAATACGAGGCTTGCAGATATTGTGGATGTAAGAAAGGCCATGGCTTGCCCCTTTTGCTATTTTGAGCCGTCTTGGCCAATCTAGAATTGTGCTGGTATCATCATCCTTGTTATGAAGCCAATCATCCAGGCTGCCATTCTCCATGTAAGAATATATGAGGAGCCTCGAGTTTCCCTGGATACAGTAACCCCAGAGTGGCACAAGATTGTCATGTCGTGCCATGGAGAGCGTTTCAACCTCTGCACTGAACTCCCTTTCCATCAGACACATTTCACCATTAAGTTTCTTGATGGCAATCATAGAGCCATCAGGTAACTGTGCCTTGTAGACTAATCCATAACCTCCACATCCAATGATGTGCTCCTGGTTAAAATTGTTTGTAGCTTCCACAATGCCAGTGAATGTGAGCTTGTTTTCTGCTTCCTTGCCTTGCTGCAACATTACCAACAAATGATCTGAATTGGTGTTCGGTGATAATGCTTCTATGTAATCATTGTTGCACCTACTTTTGGTCGTGAAACTCATACCCCTGATTGACAGAAGGAGATACCCCAACAACAAAAGAATGACAATGGCTCCAAAAAGGACACAAAAAACAATTACAAGTATGACCTTCTTGTTTTGTTGTTTCTTTGAGACCAAATGTCTATCAAATGAACTGCAATGGTGTGTAAGCATAGGACCACACAGCTTTGGATTGCCATAAAAGCTAGAATTTGTGAATGTACTAAACTGTCCGCCAGTTGGGATAGGCCCTTCTAGGTCATTATACGAGACGCTGAATTCGATAAGAAAGGTTAAATTGTTCAGTGCGGCTGGGATTGTACCAGTTAGATTATTGCTTGATAAATCCAGCATTAGCAGGTCTCTGAGGTTGCAGATCGACTGGGGGATATCTCCATATAATTTGTTAAAGCTCAAATTAAGCAAAAGGAGCGCTTTCAACTGACCAATCTCTTGAGGGATCAAACCGGTGAATTCATTGTTACCTAGATTCAGCACTTTGGGAAAAGCACTGGCCTTGCGGTATTGAAGTAGTGTTGCATCTATATATACGGGTAGTTCAAATGCTCTAGTGTCCAATTGTGCTGCAGCCCTGTCTGACCTTAGCATTGGCATCTGTAATAAGGCCATCGGAATTTCTCCCGTCAGATTGTTATTTGATACATCTAGATAGAAGAGGAAGTTTAGGCTGCTGATCCAGTCAGGTATTGGTCCAGTTAGTTGATTGTTGTCTAAAACCAGCATCTCCAACCTCGAGAGTTTTGATAACCATTGAGGTATTTTTCCAGAAAAGGAGCATCCACTTAGGTCAAGAACCTGAAGATTCTCAAAACCATCAATTCTATCATCGTCTGGTATACTTTCATTCATGAAGTTGTTGCTAATAAGAAGGGTGGTGAGTTTGCTGGAGCTCCTTAATATCTGTAGTGCATTTGTTATGTTTGTGAGATTGTTGTAACCGAGTGACAGGAAGGAAAGGGACTTCAGATTGCCTAGTCCCTTTGATAACTGGCCTTGGAATTTATTCAAAGATAGCCGCAGGGCAGTTAGGTTGCTGCATGAGTATATTGTTTCTGGAATTTTACCACTGAAGATGTTCTGCCGAAGATCTAAAGTTTGTAGACTGGGTAGATTGGAGAAATTGACATTCATGAGCTCTCCACTGAAATTGTTGCTATTGAGGTCGATGGTTTTCAGACTTGTGCAGTTGCTCAGGGTTGATGGTATGCTCCCAAACATTTTGTTGTTGTTCAAATGGAGTTCCTCCAATCTGTTGAGCTGACCGATAGACTCTGGAATGTTACCACTGAAGTTGTTCTCTCCAAGGTCAAGGGTAGCCAGCTTACCGAGTTTGACAACATTTGCCCCTTCAAGTGTTCCTTGTAAATTATTGTTTGGAAAAGAGAGGCACTCTAACGAGGTAGCATTGAAGATTTCATCAGGGAGAGTCCCACTAAGGTTGTTATGGCCAGCCTTGAGGACTCTCAGCCTGGAGCAACTTCCAAGTTCAGGGGGAATGCTCCCACTGAATTGGTTGTAACTGAGTTCAAGCACAGCTAAGGATGGTGAGTTGGTGCAGAAATTAGTTGGTATTTTCCCAGTAAAGCTGTTGTTACTGACATTGAGTGCGGCCAGATTTGTCATCACTACCCATGTGGAGGATGGAAACTGTCCTGCTAACAAATTACTTGAGATGTTGAGTACCTGCAGTGGCCTGGCAGGGGTTGAAGATGGCAACTTGTCGAGACCTCCATTCAGGCGGTTAAAGCTGATGTCTATGACGATGAGTTTGCTGGAAGACAGCAATTCCTGCGGTAGGACACTGGATAGCAGGTTGTAGGACAGGTTGAGGCGCAGCAATCCAGTCAGGTTGCCAAGAGATGGAGAGATGTACCCCTCGAGGCTCCTAGAAGGCAGTGAAACATCAGTCACGGTCCTATCTGTTCTGCAGGTGATCCCTTCCCACTCGCAACAATCCACGCCATCCTTCCATGACATGCTGAGGCCTCCATCCTTAGAAAGCCCGGTGAGGAAATTGAGGAGGGAGTTCTTCTCCTGCTCTGTACATGAACTGGTGGGAGAGGTGAAGTTGAGCAGCAGCACAAGGGCAAGGCTAAGAACAGGTATGGGCAGTCTGTTGCTTTGTGTCTTGTATGAAAAATGAGGTGGCTGCATGGTTTTCTGGTGATACTAGCATGGAAGTTGGATGCGAGTTTGTATCCTGAGTTCCTGACTGCGCAAAGCATCAGATGGTCTAATCAAGAAAGAACATGAGGAAGAAGAAAGAATTAGCTCCAACTTCCATTTTATTCTGTCTTTCTAGTCATGGTTATAAAAAAGAAACACAGGTC More
CDS seq		ATGCAGCCACCTCATTTTTCATACAAGACACAAAGCAACAGACTGCCCATACCTGTTCTTAGCCTTGCCCTTGTGCTGCTGCTCAACTTCACCTCTCCCACCAGTTCATGTACAGAGCAGGAGAAGAACTCCCTCCTCAATTTCCTCACCGGGCTTTCTAAGGATGGAGGCCTCAGCATGTCATGGAAGGATGGCGTGGATTGTTGCGAGTGGGAAGGGATCACCTGCAGAACAGATAGGACCGTGACTGATGTTTCACTGCCTTCTAGGAGCCTCGAGGGGTACATCTCTCCATCTCTTGGCAACCTGACTGGATTGCTGCGCCTCAACCTGTCCTACAACCTGCTATCCAGTGTCCTACCGCAGGAATTGCTGTCTTCCAGCAAACTCATCGTCATAGACATCAGCTTTAACCGCCTGAATGGAGGTCTCGACAAGTTGCCATCTTCAACCCCTGCCAGGCCACTGCAGGTACTCAACATCTCAAGTAATTTGTTAGCAGGACAGTTTCCATCCTCCACATGGGTAGTGATGACAAATCTGGCCGCACTCAATGTCAGTAACAACAGCTTTACTGGGAAAATACCAACTAATTTCTGCACCAACTCACCATCCTTAGCTGTGCTTGAACTCAGTTACAACCAATTCAGTGGGAGCATTCCCCCTGAACTTGGAAGTTGCTCCAGGCTGAGAGTCCTCAAGGCTGGCCATAACAACCTTAGTGGGACTCTCCCTGATGAAATCTTCAATGCTACCTCGTTAGAGTGCCTCTCTTTTCCAAACAATAATTTACAAGGAACACTTGAAGGGGCAAATGTTGTCAAACTCGGTAAGCTGGCTACCCTTGACCTTGGAGAGAACAACTTCAGTGGTAACATTCCAGAGTCTATCGGTCAGCTCAACAGATTGGAGGAACTCCATTTGAACAACAACAAAATGTTTGGGAGCATACCATCAACCCTGAGCAACTGCACAAGTCTGAAAACCATCGACCTCAATAGCAACAATTTCAGTGGAGAGCTCATGAATGTCAATTTCTCCAATCTACCCAGTCTACAAACTTTAGATCTTCGGCAGAACATCTTCAGTGGTAAAATTCCAGAAACAATATACTCATGCAGCAACCTAACTGCCCTGCGGCTATCTTTGAATAAATTCCAAGGCCAGTTATCAAAGGGACTAGGCAATCTGAAGTCCCTTTCCTTCCTGTCACTCGGTTACAACAATCTCACAAACATAACAAATGCACTACAGATATTAAGGAGCTCCAGCAAACTCACCACCCTTCTTATTAGCAACAACTTCATGAATGAAAGTATACCAGACGATGATAGAATTGATGGTTTTGAGAATCTTCAGGTTCTTGACCTAAGTGGATGCTCCTTTTCTGGAAAAATACCTCAATGGTTATCAAAACTCTCGAGGTTGGAGATGCTGGTTTTAGACAACAATCAACTAACTGGACCAATACCTGACTGGATCAGCAGCCTAAACTTCCTCTTCTATCTAGATGTATCAAATAACAATCTGACGGGAGAAATTCCGATGGCCTTATTACAGATGCCAATGCTAAGGTCAGACAGGGCTGCAGCACAATTGGACACTAGAGCATTTGAACTACCCGTATATATAGATGCAACACTACTTCAATACCGCAAGGCCAGTGCTTTTCCCAAAGTGCTGAATCTAGGTAACAATGAATTCACCGGTTTGATCCCTCAAGAGATTGGTCAGTTGAAAGCGCTCCTTTTGCTTAATTTGAGCTTTAACAAATTATATGGAGATATCCCCCAGTCGATCTGCAACCTCAGAGACCTGCTAATGCTGGATTTATCAAGCAATAATCTAACTGGTACAATCCCAGCCGCACTGAACAATTTAACCTTTCTTATCGAATTCAGCGTCTCGTATAATGACCTAGAAGGGCCTATCCCAACTGGCGGACAGTTTAGTACATTCACAAATTCTAGCTTTTATGGCAATCCAAAGCTGTGTGGTCCTATGCTTACACACCATTGCAGTTCATTTGATAGACATTTGGTCTCAAAGAAACAACAAAACAAGAAGGTCATACTTGTAATTGTTTTTTGTGTCCTTTTTGGAGCCATTGTCATTCTTTTGTTGTTGGGGTATCTCCTTCTGTCAATCAGGGGTATGAGTTTCACGACCAAAAGTAGGTGCAACAATGATTACATAGAAGCATTATCACCGAACACCAATTCAGATCATTTGTTGGTAATGTTGCAGCAAGGCAAGGAAGCAGAAAACAAGCTCACATTCACTGGCATTGTGGAAGCTACAAACAATTTTAACCAGGAGCACATCATTGGATGTGGAGGTTATGGATTAGTCTACAAGGCACAGTTACCTGATGGCTCTATGATTGCCATCAAGAAACTTAATGGTGAAATGTGTCTGATGGAAAGGGAGTTCAGTGCAGAGGTTGAAACGCTCTCCATGGCACGACATGACAATCTTGTGCCACTCTGGGGTTACTGTATCCAGGGAAACTCGAGGCTCCTCATATATTCTTACATGGAGAATGGCAGCCTGGATGATTGGCTTCATAACAAGGATGATGATACCAGCACAATTCTAGATTGGCCAAGACGGCTCAAAATAGCAAAAGGGGCAAGCCATGGCCTTTCTTACATCCACAATATCTGCAAGCCTCGTATTGTCCACCGTGACATCAAATCTAGCAACATCCTTCTCGACAAAGAATTCAAAGCTTATATTGCAGATTTTGGATTATCACGGTTGATCCTTCCCAACAAAACTCATGTCACAACTGAGCTAGTTGGCACTCTTGGTTACATCCCACCTGAGTACGCCCAGGCATGGGTTGCTACATTGAAAGGTGATGTATACAGTTTCGGAGTGGTCCTGCTTGAGCTTCTCACTGGGAGGAGGCCAGTTCCGATACTGTCTACCTCAAAGGAACTTGTCCCATGGGTACAGGAGATGGTATCAAATGGAAAGCAGATTGAGGTGCTGGATTTAACATTTCAAGGCACAGGGTGTGAAGAGCAAATGCTAAAGGTCCTTGAAATTGCTTGCAAGTGTGTCAAAGGTGATCCTTTGCGGAGGCCTACTATGATAGAAGTAGTAGCCAGTCTGCACAGTATAGACCCTGACGGCCTGACCTAA More
Protein seq		MQPPHFSYKTQSNRLPIPVLSLALVLLLNFTSPTSSCTEQEKNSLLNFLTGLSKDGGLSMSWKDGVDCCEWEGITCRTDRTVTDVSLPSRSLEGYISPSLGNLTGLLRLNLSYNLLSSVLPQELLSSSKLIVIDISFNRLNGGLDKLPSSTPARPLQVLNISSNLLAGQFPSSTWVVMTNLAALNVSNNSFTGKIPTNFCTNSPSLAVLELSYNQFSGSIPPELGSCSRLRVLKAGHNNLSGTLPDEIFNATSLECLSFPNNNLQGTLEGANVVKLGKLATLDLGENNFSGNIPESIGQLNRLEELHLNNNKMFGSIPSTLSNCTSLKTIDLNSNNFSGELMNVNFSNLPSLQTLDLRQNIFSGKIPETIYSCSNLTALRLSLNKFQGQLSKGLGNLKSLSFLSLGYNNLTNITNALQILRSSSKLTTLLISNNFMNESIPDDDRIDGFENLQVLDLSGCSFSGKIPQWLSKLSRLEMLVLDNNQLTGPIPDWISSLNFLFYLDVSNNNLTGEIPMALLQMPMLRSDRAAAQLDTRAFELPVYIDATLLQYRKASAFPKVLNLGNNEFTGLIPQEIGQLKALLLLNLSFNKLYGDIPQSICNLRDLLMLDLSSNNLTGTIPAALNNLTFLIEFSVSYNDLEGPIPTGGQFSTFTNSSFYGNPKLCGPMLTHHCSSFDRHLVSKKQQNKKVILVIVFCVLFGAIVILLLLGYLLLSIRGMSFTTKSRCNNDYIEALSPNTNSDHLLVMLQQGKEAENKLTFTGIVEATNNFNQEHIIGCGGYGLVYKAQLPDGSMIAIKKLNGEMCLMEREFSAEVETLSMARHDNLVPLWGYCIQGNSRLLIYSYMENGSLDDWLHNKDDDTSTILDWPRRLKIAKGASHGLSYIHNICKPRIVHRDIKSSNILLDKEFKAYIADFGLSRLILPNKTHVTTELVGTLGYIPPEYAQAWVATLKGDVYSFGVVLLELLTGRRPVPILSTSKELVPWVQEMVSNGKQIEVLDLTFQGTGCEEQMLKVLEIACKCVKGDPLRRPTMIEVVASLHSIDPDGLT
Function		Tyrosine-sulfated glycopeptide receptor 1 [UniProtKB/Swiss-Prot:Q9C7S5]

Transcripts

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsNip_02g0154200	OsNip_02t0154200-01	Chr02	2978855	2982356	-	RAP2018-11-26
CDS seq	ATGCAGCCACCTCATTTTTCATACAAGACACAAAGCAACAGACTGCCCATACCTGTTCTTAGCCTTGCCCTTGTGCTGCTGCTCAACTTCACCTCTCCCACCAGTTCATGTACAGAGCAGGAGAAGAACTCCCTCCTCAATTTCCTCACCGGGCTTTCTAAGGATGGAGGCCTCAGCATGTCATGGAAGGATGGCGTGGATTGTTGCGAGTGGGAAGGGATCACCTGCAGAACAGATAGGACCGTGACTGATGTTTCACTGCCTTCTAGGAGCCTCGAGGGGTACATCTCTCCATCTCTTGGCAACCTGACTGGATTGCTGCGCCTCAACCTGTCCTACAACCTGCTATCCAGTGTCCTACCGCAGGAATTGCTGTCTTCCAGCAAACTCATCGTCATAGACATCAGCTTTAACCGCCTGAATGGAGGTCTCGACAAGTTGCCATCTTCAACCCCTGCCAGGCCACTGCAGGTACTCAACATCTCAAGTAATTTGTTAGCAGGACAGTTTCCATCCTCCACATGGGTAGTGATGACAAATCTGGCCGCACTCAATGTCAGTAACAACAGCTTTACTGGGAAAATACCAACTAATTTCTGCACCAACTCACCATCCTTAGCTGTGCTTGAACTCAGTTACAACCAATTCAGTGGGAGCATTCCCCCTGAACTTGGAAGTTGCTCCAGGCTGAGAGTCCTCAAGGCTGGCCATAACAACCTTAGTGGGACTCTCCCTGATGAAATCTTCAATGCTACCTCGTTAGAGTGCCTCTCTTTTCCAAACAATAATTTACAAGGAACACTTGAAGGGGCAAATGTTGTCAAACTCGGTAAGCTGGCTACCCTTGACCTTGGAGAGAACAACTTCAGTGGTAACATTCCAGAGTCTATCGGTCAGCTCAACAGATTGGAGGAACTCCATTTGAACAACAACAAAATGTTTGGGAGCATACCATCAACCCTGAGCAACTGCACAAGTCTGAAAACCATCGACCTCAATAGCAACAATTTCAGTGGAGAGCTCATGAATGTCAATTTCTCCAATCTACCCAGTCTACAAACTTTAGATCTTCGGCAGAACATCTTCAGTGGTAAAATTCCAGAAACAATATACTCATGCAGCAACCTAACTGCCCTGCGGCTATCTTTGAATAAATTCCAAGGCCAGTTATCAAAGGGACTAGGCAATCTGAAGTCCCTTTCCTTCCTGTCACTCGGTTACAACAATCTCACAAACATAACAAATGCACTACAGATATTAAGGAGCTCCAGCAAACTCACCACCCTTCTTATTAGCAACAACTTCATGAATGAAAGTATACCAGACGATGATAGAATTGATGGTTTTGAGAATCTTCAGGTTCTTGACCTAAGTGGATGCTCCTTTTCTGGAAAAATACCTCAATGGTTATCAAAACTCTCGAGGTTGGAGATGCTGGTTTTAGACAACAATCAACTAACTGGACCAATACCTGACTGGATCAGCAGCCTAAACTTCCTCTTCTATCTAGATGTATCAAATAACAATCTGACGGGAGAAATTCCGATGGCCTTATTACAGATGCCAATGCTAAGGTCAGACAGGGCTGCAGCACAATTGGACACTAGAGCATTTGAACTACCCGTATATATAGATGCAACACTACTTCAATACCGCAAGGCCAGTGCTTTTCCCAAAGTGCTGAATCTAGGTAACAATGAATTCACCGGTTTGATCCCTCAAGAGATTGGTCAGTTGAAAGCGCTCCTTTTGCTTAATTTGAGCTTTAACAAATTATATGGAGATATCCCCCAGTCGATCTGCAACCTCAGAGACCTGCTAATGCTGGATTTATCAAGCAATAATCTAACTGGTACAATCCCAGCCGCACTGAACAATTTAACCTTTCTTATCGAATTCAGCGTCTCGTATAATGACCTAGAAGGGCCTATCCCAACTGGCGGACAGTTTAGTACATTCACAAATTCTAGCTTTTATGGCAATCCAAAGCTGTGTGGTCCTATGCTTACACACCATTGCAGTTCATTTGATAGACATTTGGTCTCAAAGAAACAACAAAACAAGAAGGTCATACTTGTAATTGTTTTTTGTGTCCTTTTTGGAGCCATTGTCATTCTTTTGTTGTTGGGGTATCTCCTTCTGTCAATCAGGGGTATGAGTTTCACGACCAAAAGTAGGTGCAACAATGATTACATAGAAGCATTATCACCGAACACCAATTCAGATCATTTGTTGGTAATGTTGCAGCAAGGCAAGGAAGCAGAAAACAAGCTCACATTCACTGGCATTGTGGAAGCTACAAACAATTTTAACCAGGAGCACATCATTGGATGTGGAGGTTATGGATTAGTCTACAAGGCACAGTTACCTGATGGCTCTATGATTGCCATCAAGAAACTTAATGGTGAAATGTGTCTGATGGAAAGGGAGTTCAGTGCAGAGGTTGAAACGCTCTCCATGGCACGACATGACAATCTTGTGCCACTCTGGGGTTACTGTATCCAGGGAAACTCGAGGCTCCTCATATATTCTTACATGGAGAATGGCAGCCTGGATGATTGGCTTCATAACAAGGATGATGATACCAGCACAATTCTAGATTGGCCAAGACGGCTCAAAATAGCAAAAGGGGCAAGCCATGGCCTTTCTTACATCCACAATATCTGCAAGCCTCGTATTGTCCACCGTGACATCAAATCTAGCAACATCCTTCTCGACAAAGAATTCAAAGCTTATATTGCAGATTTTGGATTATCACGGTTGATCCTTCCCAACAAAACTCATGTCACAACTGAGCTAGTTGGCACTCTTGGTTACATCCCACCTGAGTACGCCCAGGCATGGGTTGCTACATTGAAAGGTGATGTATACAGTTTCGGAGTGGTCCTGCTTGAGCTTCTCACTGGGAGGAGGCCAGTTCCGATACTGTCTACCTCAAAGGAACTTGTCCCATGGGTACAGGAGATGGTATCAAATGGAAAGCAGATTGAGGTGCTGGATTTAACATTTCAAGGCACAGGGTGTGAAGAGCAAATGCTAAAGGTCCTTGAAATTGCTTGCAAGTGTGTCAAAGGTGATCCTTTGCGGAGGCCTACTATGATAGAAGTAGTAGCCAGTCTGCACAGTATAGACCCTGACGGCCTGACCTAA More
Protein seq	MQPPHFSYKTQSNRLPIPVLSLALVLLLNFTSPTSSCTEQEKNSLLNFLTGLSKDGGLSMSWKDGVDCCEWEGITCRTDRTVTDVSLPSRSLEGYISPSLGNLTGLLRLNLSYNLLSSVLPQELLSSSKLIVIDISFNRLNGGLDKLPSSTPARPLQVLNISSNLLAGQFPSSTWVVMTNLAALNVSNNSFTGKIPTNFCTNSPSLAVLELSYNQFSGSIPPELGSCSRLRVLKAGHNNLSGTLPDEIFNATSLECLSFPNNNLQGTLEGANVVKLGKLATLDLGENNFSGNIPESIGQLNRLEELHLNNNKMFGSIPSTLSNCTSLKTIDLNSNNFSGELMNVNFSNLPSLQTLDLRQNIFSGKIPETIYSCSNLTALRLSLNKFQGQLSKGLGNLKSLSFLSLGYNNLTNITNALQILRSSSKLTTLLISNNFMNESIPDDDRIDGFENLQVLDLSGCSFSGKIPQWLSKLSRLEMLVLDNNQLTGPIPDWISSLNFLFYLDVSNNNLTGEIPMALLQMPMLRSDRAAAQLDTRAFELPVYIDATLLQYRKASAFPKVLNLGNNEFTGLIPQEIGQLKALLLLNLSFNKLYGDIPQSICNLRDLLMLDLSSNNLTGTIPAALNNLTFLIEFSVSYNDLEGPIPTGGQFSTFTNSSFYGNPKLCGPMLTHHCSSFDRHLVSKKQQNKKVILVIVFCVLFGAIVILLLLGYLLLSIRGMSFTTKSRCNNDYIEALSPNTNSDHLLVMLQQGKEAENKLTFTGIVEATNNFNQEHIIGCGGYGLVYKAQLPDGSMIAIKKLNGEMCLMEREFSAEVETLSMARHDNLVPLWGYCIQGNSRLLIYSYMENGSLDDWLHNKDDDTSTILDWPRRLKIAKGASHGLSYIHNICKPRIVHRDIKSSNILLDKEFKAYIADFGLSRLILPNKTHVTTELVGTLGYIPPEYAQAWVATLKGDVYSFGVVLLELLTGRRPVPILSTSKELVPWVQEMVSNGKQIEVLDLTFQGTGCEEQMLKVLEIACKCVKGDPLRRPTMIEVVASLHSIDPDGLT More

Event Type

Chromosome

Start

End

Strand

Alternative mRNAs

Total mRNAs

Source

Expression

	Leaf	Root	Panicle
FPKM	0.418293	1.286673	1.021794

Homologues

Genome & Annotation	Homologs	Type	Expression(FPKM)
Genome & Annotation	Homologs	Type	Leaf	Root	Panicle
Nipponbare \| IRGSP 1.0 \| Gramene(+IsoSeq)	OsNip_06g0691800	SBH	0.548103	0.454097	1.088344
Nipponbare \| IRGSP 1.0 \| MSU	LOC_Os02g05980	RBH	0.186136	0.521935	0.259619
Nipponbare \| IRGSP 1.0 \| RAP-db	Os02g0154200	RBH	None	None	None
Azucena \| AzucenaRS1 \| Gramene(+IsoSeq)	OsAzu_02g0004120	SBH	0.124114	14.442955	1.259517
KETAN NANGKA \| Os128077RS1 \| Gramene(+IsoSeq)	OsKeNa_02g0004260	SBH	0.069201	0.845967	0.776244
CHAO MEO \| Os132278RS1 \| Gramene(+IsoSeq)	OsCMeo_02g0004170	SBH	0.137843	1.557139	0.736899
ARC 10497 \| Os117425RS1 \| Gramene(+IsoSeq)	OsARC_02g0004020	SBH	0.031011	0.040793	None
PR 106 \| Os127742RS1 \| Gramene(+IsoSeq)	OsPr106_02g0004110	SBH	2.410689	8.209851	3.171613
Minghui 63 \| MH63RS3 \| HZAU	OsMH63_02G0050200	SBH	0.852885	2.079683	1.239989
IR 64 \| OsIR64RS1 \| Gramene(+IsoSeq)	OsIR64_02g0004280	SBH	0.048594	0.017924	0.096358
Zhenshan 97 \| ZS97RS3 \| HZAU	OsZS97_02G0052300	SBH	0.2408695	0.750181	2.0892055
LIMA \| Os127564RS1 \| Gramene(+IsoSeq)	OsLima_02g0004220	RBH	0.034492	0.108827	None
KHAO YAI GUANG \| Os127518RS1 \| Gramene(+IsoSeq)	OsKYG_02g0003980	SBH	0.070042	4.234505	None
GOBOL SAIL \| Os132424RS1 \| Gramene(+IsoSeq)	OsGoSa_02g0004260	SBH	3.191976	29.049385	None
LIU XU \| Os125827RS1 \| Gramene(+IsoSeq)	OsLiXu_02g0004210	SBH	0.087713	0.227309	0.100002
LARHA MUGAD \| Os125619RS1 \| Gramene(+IsoSeq)	OsLaMu_02g0004290	SBH	0.032945	0.534010	None
N22 \| OsN22RS2 \| Gramene(+IsoSeq)	OsN22_02G004060	SBH	0.292437	2.052631	0.572981
NATEL BORO \| Os127652RS1 \| Gramene(+IsoSeq)	OsNaBo_02g0004010	SBH	0.630622	3.130005	0.941510

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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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