Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_02g0024840 | OGI:02001240 | 16/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr02:25946628-25947972 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | atgtcttctcttctggaattatccttggcatgcaatatgctaggcaacgcattgccatctaacattggtgacaccctccctaagctccaagttctgttcttaggaggcaacatgttcaaaggtaacatcccggcttccataggcaatgccacaggactacagcaaataggtccatcaaataatagtttcactggccaagtcccaagctcttttgggagaatttcagggatggttcttctaaatcttgagcgtaacgagcttgaagcaacggatagtgaaggctgggaatttctcaatgccttggcaaattgtagtcgtctagaagtgttttcattaactcaaaatcaactacagggagcaataccaaatttttttggtaacctttccaccagtcttgggtacctgttgatgggtggaaacaaactatcaggaaatgttcctccaagcataggaatatatcatgatttagctcaactctcgctagatggaaacaatcttactggcaaaatcgaagaatgggtcgAaaaactgactaagctacaacatttaaatctccaattgaacaatttcattggtacaattccactttccattggcaatcttacacaaatggcatcgctcattctagcagaaaatgaactcgaaggttccataccatctagcctaggcaatttttcgcaactcttgaagttgaaccttagctacaacaatttccatggtcatatacctaaggaggtcttaactcttaagcatcacaacaatgacatcatgcgtattggcctataacgatttagatggaccaatacctctagagtttgctgagctgcaacagcttacaaagttacatctttcatcaaacaggttaactgggacaattcctgaaagcttgggccaatgccatgagctagaaatcatccaaatggaccaaaaccttctcactggaaacattccgatatcacttcgtaacctcaaaagcttgagcatgcttaatctttcccataacaacttgtctagcaccatacctacaactttagatgaactaaaacttctcaaccagctggacttatcatacaacaatctcaatggagaagtacaaacaaatggtgtattcgaaaacaccatggcggtgtcaatcattggaaattggggtctctgtggaggaccatcaaatctacagatgctaccatgcactactacttccccgagaaaaggaatgctatactacatggtcaaaatactaacaccaatattgggcttcacgtcagttgtaatgttgctccacttaacacaagttcaaaacaagatgtcaaagggaacatatttgttgttactttcatttggctag
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| CDS seq | atgtcttctcttctggaattatccttggcatgcaatatgctaggcaacgcattgccatctaacattggtgacaccctccctaagctccaagttctgttcttaggaggcaacatgttcaaaggtaacatcccggcttccataggcaatgccacaggactacagcaaataggtccatcaaataatagtttcactggccaagtcccaagctcttttgggagaatttcagggatggttcttctaaatcttgagcgtaacgagcttgaagcaacggatagtgaaggctgggaatttctcaatgccttggcaaattgtagtcgtctagaagtgttttcattaactcaaaatcaactacagggagcaataccaaatttttttggtaacctttccaccagtcttgggtacctgttgatgggtggaaacaaactatcaggaaatgttcctccaagcataggaatatatcatgatttagctcaactctcgctagatggaaacaatcttactggcaaaatcgaagaatgggtcgAaaaactgactaagctacaacatttaaatctccaattgaacaatttcattggtacaattccactttccattggcaatcttacacaaatggcatcgctcattctagcagaaaatgaactcgaaggttccataccatctagcctaggcaatttttcgcaactcttgaagttgaaccttagctacaacaatttccatggtcatatacctaaggaggtcttaactcttaagcatcacaacaatgacatcatgcatggaccaatacctctagagtttgctgagctgcaacagcttacaaagttacatctttcatcaaacaggttaactgggacaattcctgaaagcttgggccaatgccatgagctagaaatcatccaaatggaccaaaaccttctcactggaaacattccgatatcacttcgtaacctcaaaagcttgagcatgcttaatctttcccataacaacttgtctagcaccatacctacaactttagatgaactaaaacttctcaaccagctggacttatcatacaacaatctcaatggagaagtacaaacaaatggtgtattcgaaaacaccatggcggtgtcaatcattggaaattggggtctctgtggaggaccatcaaatctacagatgctaccatgcactactacttccccgagaaaaggaatgctatactacatggtcaaaatactaacaccaatattgggcttcacgtcagttgtaatgttgctccacttaacacaagttcaaaacaagatgtcaaagggaacatatttgttgttactttcatttggctag
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| Protein seq | MSSLLELSLACNMLGNALPSNIGDTLPKLQVLFLGGNMFKGNIPASIGNATGLQQIGPSNNSFTGQVPSSFGRISGMVLLNLERNELEATDSEGWEFLNALANCSRLEVFSLTQNQLQGAIPNFFGNLSTSLGYLLMGGNKLSGNVPPSIGIYHDLAQLSLDGNNLTGKIEEWVEKLTKLQHLNLQLNNFIGTIPLSIGNLTQMASLILAENELEGSIPSSLGNFSQLLKLNLSYNNFHGHIPKEVLTLKHHNNDIMHGPIPLEFAELQQLTKLHLSSNRLTGTIPESLGQCHELEIIQMDQNLLTGNIPISLRNLKSLSMLNLSHNNLSSTIPTTLDELKLLNQLDLSYNNLNGEVQTNGVFENTMAVSIIGNWGLCGGPSNLQMLPCTTTSPRKGMLYYMVKILTPILGFTSVVMLLHLTQVQNKMSKGTYLLLLSFG |
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| Function | Receptor kinase-like protein Xa21 [UniProtKB/Swiss-Prot:Q2R2D5] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_02g0024840 | OsNaBo_02g0024840.01 | Chr02 | 25946628 | 25947972 | + | NAM | ||
| CDS seq | atgtcttctcttctggaattatccttggcatgcaatatgctaggcaacgcattgccatctaacattggtgacaccctccctaagctccaagttctgttcttaggaggcaacatgttcaaaggtaacatcccggcttccataggcaatgccacaggactacagcaaataggtccatcaaataatagtttcactggccaagtcccaagctcttttgggagaatttcagggatggttcttctaaatcttgagcgtaacgagcttgaagcaacggatagtgaaggctgggaatttctcaatgccttggcaaattgtagtcgtctagaagtgttttcattaactcaaaatcaactacagggagcaataccaaatttttttggtaacctttccaccagtcttgggtacctgttgatgggtggaaacaaactatcaggaaatgttcctccaagcataggaatatatcatgatttagctcaactctcgctagatggaaacaatcttactggcaaaatcgaagaatgggtcgAaaaactgactaagctacaacatttaaatctccaattgaacaatttcattggtacaattccactttccattggcaatcttacacaaatggcatcgctcattctagcagaaaatgaactcgaaggttccataccatctagcctaggcaatttttcgcaactcttgaagttgaaccttagctacaacaatttccatggtcatatacctaaggaggtcttaactcttaagcatcacaacaatgacatcatgcatggaccaatacctctagagtttgctgagctgcaacagcttacaaagttacatctttcatcaaacaggttaactgggacaattcctgaaagcttgggccaatgccatgagctagaaatcatccaaatggaccaaaaccttctcactggaaacattccgatatcacttcgtaacctcaaaagcttgagcatgcttaatctttcccataacaacttgtctagcaccatacctacaactttagatgaactaaaacttctcaaccagctggacttatcatacaacaatctcaatggagaagtacaaacaaatggtgtattcgaaaacaccatggcggtgtcaatcattggaaattggggtctctgtggaggaccatcaaatctacagatgctaccatgcactactacttccccgagaaaaggaatgctatactacatggtcaaaatactaacaccaatattgggcttcacgtcagttgtaatgttgctccacttaacacaagttcaaaacaagatgtcaaagggaacatatttgttgttactttcatttggctag
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| Protein seq | MSSLLELSLACNMLGNALPSNIGDTLPKLQVLFLGGNMFKGNIPASIGNATGLQQIGPSNNSFTGQVPSSFGRISGMVLLNLERNELEATDSEGWEFLNALANCSRLEVFSLTQNQLQGAIPNFFGNLSTSLGYLLMGGNKLSGNVPPSIGIYHDLAQLSLDGNNLTGKIEEWVEKLTKLQHLNLQLNNFIGTIPLSIGNLTQMASLILAENELEGSIPSSLGNFSQLLKLNLSYNNFHGHIPKEVLTLKHHNNDIMHGPIPLEFAELQQLTKLHLSSNRLTGTIPESLGQCHELEIIQMDQNLLTGNIPISLRNLKSLSMLNLSHNNLSSTIPTTLDELKLLNQLDLSYNNLNGEVQTNGVFENTMAVSIIGNWGLCGGPSNLQMLPCTTTSPRKGMLYYMVKILTPILGFTSVVMLLHLTQVQNKMSKGTYLLLLSFG
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0615800 | SBH | 47.578331 | 42.379108 | 23.843420 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g40240 | SBH | 43.565369 | 39.550552 | 4.059873 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0615800 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0024890 | SBH | 0.266269 | 0.551824 | 0.649657 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0025230 | SBH | 0.246092 | 0.000000 | 0.510617 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0025050 | SBH | 0.778974 | 0.000000 | 0.521185 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0004250 | SBH | 0.061636 | 0.022630 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0024710 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0391600 | SBH | 0.170858 | 0.556558 | 0.514145 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0004280 | SBH | 0.048594 | 0.017924 | 0.096358 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0425400 | SBH | 1.672875 | 0.3362355 | 3.077142 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0024730 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0003980 | SBH | 0.070042 | 4.234505 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0004260 | SBH | 3.191976 | 29.049385 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0004210 | SBH | 0.087713 | 0.227309 | 0.100002 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0004290 | SBH | 0.032945 | 0.534010 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G024990 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0024890 | SBH | 0.206270 | 0.000000 | 0.311611 |
