Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_02g0227900 | OGI:02021150 | 16/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr02:7179394-7184521 | ||||||||
| Gene Symbol | RLCK70, OsRLCK70 | ||||||||||
| DNA seq | TCAAATGGCCGGTGGCGATGGTAATGGGCAGTTGACCTGGCAGGCCTCGAGACTCTGGTAGCATTGCCCGTCGCTGACCTCACAACACCAGCAGTTCTTGCAGAGGTCTGGTCGCTTTGCACATAGCGGCCCAGGTGGTATGTTGATCTTCTCTCCCAACATGTCACCATTGCTCCGGCCTATTAAATATTAATTAATTAATTACAACGTCAAAACAATAATTAAATCATTAGCACAGACACATATGTATGCTATGGTGAAAATGATGGTTAAATGGAACTTGCACAAAGAATATAGAAACAAATTGCTCAAAGAATCCCTTCTATATTCATGAATTTTATCTTATCTTTACATGTCCTTGCGTTTTTTTTATCTCCTTTATATCTATTCTATTAGTTGACTGTTAGATTTTTTCAAAATGACTTATATGTCATACGTACTTATGCTTTCTACTTTGTAAACATAATCTAAAAAGAATTGTGATAAAATCAAACTGGACATAATTATGACCCCAAATATAGAAAATAGTTTTTTTTTACGAATTTGATGAAACACATACAAAAGATTCACCAAGAAACTGAAAAGGCAAAGTTTTTTTCAGTTGGGTTTAAATTTCAGTGGAAACATTTAAAAATATTTACAAATATTAAATTTTTGGTCTGCTCCATTTGTTTTTTTCTTTTCATAAACGAATCTTTTTCACCTTGAAGCTACTCCCTCCGTTTCATCAGGTTATAAGACTTTTATAGCAAACATCTATATGAATGTAGACAATGCTAGAAAGTCTTATAATATAAAACAGAGGAAGTATGCTAATTATTATTTCTAAAAGAGTCTAACGGTTAACTCGCAGTCGACTAGCTAGATGTATATAGGACGGTCATATGGTGCTTTAAGGTGTCTGGGCTTCAAGGGTTTAGAATGCACGGATTGGAAATTGGAATCCAAAATAATCAAGAACTCAGACACGTAAGGAACGAAACAAAATTTAGGGGAAAAATTTAATTGAAAACTCCGAGGAACCTAAGGAATTTTCTGTATATATATTGATCAGTATTCTCGAGACTAATTAAAAAGATGTTTGGACTTTGATTTAAGCCACCCCCAAAACCATATACATACGCCATCGATCTTAATTAAGGTCCACATGCACCAGTGCTAATCCATTTTGGCGTTGAGTTTTCTGCTGCAGGTGAATCTGCACTACACTAACACCTACATCAACAGAGGCTTTTGAACCACGAACAATTAATGGCATCAACAATTCTGGTCAATAATCCACCCTTTGTTCTACCCTATTTTGCATAAGATTTATTAGGTGTTCATGCTAAGAGATCCTTTTCGAATCATTAAGTTCACCTCCACCAAAAGAAACAAAGTCAATTAACAATATATGTGGAGATAAACTAAGGGCACTCAACGTTCCATCTCATCTAATTTTTATAGTGTTAAATGCATTTTCATGTAAAACAAAAACCGAGGTATCTAAAAAGTTAATGAGGAGAGATGAAAAAAGATGAAGAAATCATTAGTAAGAAACTACCTCTACACATAAATCAAGAATGAAAACAATAGATAAAAAAAAAGGAGAGATAAGAGAGGTGATTGGATGAGAGTTTATGTTGAACCAACCACACCCGCTGAGTATATAGTTTTTTTTTTGAACGACGGCAATGCTTGCCATTCATTGAATAAAGCAGGGAGCAATATTTACATGTAAGGAGAAAAGGTAATATTTACAAAGATCGAATAGACACTAAGGCAATATCTGCACTAGGCGTTTGGCTCCCGCCGTAGCCCAGAGTCGATAATTTCTAATTAGGATTGCCCTTACATTGCACTGCAGGAACAGCAGCGCATCCGATGATCAGCAGCAGCAGAAACAGCAACCGAGAATCGACGTTCTTCATCTCCATTATTTGTGGTCTGATTTTTGCAGGGCTCGATGATCTTTTAGAGAAGAATATAATCTGCAGGCTCTCGTACTGGACGAGTAGATGATCTATTTATATAGAGGCCTCGTGAATAGTGTTAATTATCGCAATTTTTTTAGATAATGTTAATTATCGTAATTGATGCTGGCTATAAATAGATAATTGTAACCCGAGCCGGTATTTCTGTAATTAGAGACAATTGATGCCGTTTATTATTAGCAAGGCTGATATATAATGCTGCCTGTTGCGTTTGCTGGACTGATTTCTTTCTGTTTTCTCGACAAGTTCCATAAGAATATCTTGACAGCAATGGAAAGTAGGCGTAATGGGCCAAGACAGAATGTTAGCCTTGGGCTGTTGGGCCTTGGGGCCGAGGACGTGTTCATACCAGTTAATCCGTCCATACATTTATACTATAAAATTTTGATTTTCACAGCATTACTCACCCTTAATAATTTTATAGACCGATAAAGCTGCAAAATGGACACGTCGCTAATTGTTGTCTTTCGAATCATGTCTTTACTCTTGCAGTGGAAGATGCTACGACGTACTACATCCTTATGAACAATGCAGCCCTGGAGCAGGGATTGTAATTTTAGTTTCAAAATTTCCGAAATTCTGGTAATTTCGGAAAGAGAGAATCTATTATATGCCACTGAGTTTATTACAGATCTATGAGTTGCCACTGACTTTATCACATTCTACAATATGCCACCGATTTTTGCTTAAATTCTACGATTTACCATCGCCGTCCGGTTATCCTCCATTAGCACCGTACAATTTTGCCCAAATGACCAAAATACTCCTAGAAAAAAACTTCCGAAATTTGAATAAAAATTCTAAAATATCATATTATAAACATAAGATTGTAAATATCCAAAATTTGGCAAAAACTTAAAATCCGATATTTCAAAATTTTTGAAAGTTTCTGTCCCAGGGGTATTTTGGTCATTTCGATAAATTTGTACAGTACTAACGGAGACTAACTCAGTGAACATAAAAGTTAAGCAAAAGTCGATGGCGATGGTAAATCGTAGAAGTTAAGCAAAAGTCGATGATATATTGTAAAACGTAACAAAATCAATGGTATATCATAGACCTGTGATAAAGTCAGTGGCATATAATGGATTCTCTCTTTCGAAAACCCTCTCGGCAAGTCAATATCTCGGTCGATATTTTCGGGTTTTCTCAATTTTTTTGTGAATTTAATCAAAATTTTAGAAAATTTCAGCCAATAAAACCTAAATTTCGGTTCTATAAAAATGGCCGAAATTTTAGCCGAAATCAAAATTGAAAACCCTGTCCTAGAGACACTTATCAGTCATGTTCAAACGACAATAGCATCACTGTTTGCATTTATCAAAGTAGTTCTGGTAGGTGTTCTTTTTGCTAGGTACTCCAGTACATACCTCACAGGGGAGGCTCCTGCACTCCTGCTTATAGCTAGCTCTGTTGTTTCTACCTCTTAATTAGCTTTCATTTTTTTTTATGATGAGATGGATTGAAACCAGACTCTACATCCATAGAGCGGTTGTACAGTTGTACACAGCCAATTTTGCTTTCATATATGGAACATGTTATTTGAGTTTTGCATACCTGTTTAGGGTGTAAGCGAGTAGTCAGATTATCATCCCCTAAACATGTGATCATGTTAAGCAGGTAACCCCAGCAAAATCTAGATGGCTTTCAATAAAAAGCTAGGTCTTTATTACCTTTATTCTTAAAAGAAAAAAAACATAGACGTAGGCCACGATGCACATTAGCCACTCAATACCATTGCCCACACACCATAGCTCCTACAAGGCTACGACGAATAAAGTAGATGGAGCTTGATATGAATGTGTGTGTGCATCTCTGCCTCTCTGGCCTTGAACTAACATGCAAAATACAGAGTAACATATAAAATACTCAGGTGGTTTTGTGTTTAACAATATGTTGGAATCAATCCAGATAGTTGGTTCCTAGAAAGATCCAGCCTGACAAGGTTGGCGAGCTTGGACATGTCTGGAGGTAGCATGCCAGAGAACAAATTATTTTTCGCTAAAAATCTATGGAGTCCAGTTGCAGAAGATGTTGGAATTGCACCAGAGAACCTATTGTTTCCTATCTAAATCTACGAGATGTTGGATGATATCTAACTTGGCAGAGTACCGGTGAAGTTGTTTCCTCCAATCATAACTATGGTAAGCATCGCACACGACCATATTTTCTCTGGGAAGTCCCCAACAAAGTGGTTGTTGGATGCCTTGATAATGTGGATGGTGTCGCAGTCCCCGAGGCTCACCGGAAACACTCCATGGCACGTGAATAGCCGAAGGTCGGTAAGATTCGGCAGCATTCCAACACCACTTGGGATTTGTCCAACGAGGTTGTTGTAGTACAAGTATAGAATTTTCAAGTTCTTCAAGTTCACAATATCTTCTGGTATTGATCCGGTGAGCTTGTTGATGGACAAATCAAGCTCCTGCAATTTGAGAGCTGAGATGTCAGAACCAATCTCACCAATGAAATTGTTTCCGGAGAGGAACAACATCTCGAGCTTCTGAAGCTTCCATATCCACTTTGGGATTTTTTCCTTCCAACTTATTTATTGATATGTCCAATAGCTCGAGCTCTGTCAATGCTGACAGAACATTAGGGATGTTACCAATCAGGTTCATCCATGATAGCCACAGATATGTCAGCTTAGTCAGCTTGCCAAACTCGTTTGGAATTAGACTAGCCTTGAACGGATTATATGCCAATGTTAGCATCTCAAGCTCCACGAGACCTCCAATGGCAGCACCCTGATAGGTCCCATTGAAATTGTTACTGTCAAGCACCAGCGACTTGAGCTTGGAAAACCGACCAATAGCCGATGGCAGGTCGCCGATGAAAGAATTTCTTGACAGGTTGAGGTGCTGCATCCCCAAGGACAGCTTGTCAACATGTTCCGGAAGTTTGCCAGTGAACTCATTGTTGGACAGGTCAAGGAACTGCAAAGCTGAGCAACTGTAGAGCGCCGTAGGGAACTCACCGGTGAGATTGTTGAAAGAGAGGTCTAAGTACTTCAGGTTCTTGAGGCTACAAATAGAAGCTGGGATTAGATTGGCTATTTGGAAGTTGTGGAAGGAGAGGGATGTAACCTGGCCATTTCTACAACCAATTCCTGCCCAATTACAGTGACTGAAAGAACTGGAGTTTCTCACTTCCAT
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| CDS seq | ATGGAAGTGAGAAACTCCAGTTCTTTCAGTCACTGTAATTGGGCAGGAATTGGTTGTAGAAATGGCCAGGTTACATCCCTCTCCTTCCACAACTTCCAAATAGCCAATCTAATCCCAGCTTCTATTTGTAGCCTCAAGAACCTGAAGTACTTAGACCTCTCTTTCAACAATCTCACCGGTGAGTTCCCTACGGCGCTCTACAGTTGCTCAGCTTTGCAGTTCCTTGACCTGTCCAACAATGAGTTCACTGGCAAACTTCCGGAACATGTTGACAAGCTGTCCTTGGGGATGCAGCACCTCAACCTGTCAAGAAATTCTTTCATCGGCGACCTGCCATCGGCTATTGGTCGGTTTTCCAAGCTCAAGTCGCTGGTGCTTGACAGTAACAATTTCAATGGGACCTATCAGGGTGCTGCCATTGGAGGTCTCGTGGAGCTTGAGATGCTAACATTGGCATATAATCCGTTCAAGGCTAGTCTAATTCCAAACGAGTTTGGCAAGCTGACTAAGCTGACATATCTGTGGCTATCATGGATGAACCTGATTGGTAACATCCCTAATGTTCTGTCAGCATTGACAGAGCTCGAGCTATTGGACATATCAATAAATAAGTTGGAAGGAAAAAATCCCAAAGTGGATATGGAAGCTTCAGAAGCTCGAGATGAGCTTGATTTGTCCATCAACAAGCTCACCGGATCAATACCAGAAGATATTGTGAACTTGAAGAACTTGAAAATTCTATACTTGTACTACAACAACCTCGTTGGACAAATCCCAAGTGGTGTTGGAATGCTGCCGAATCTTACCGACCTTCGGCTATTCACGTGCCATGGAGTGTTTCCGGTGAGCCTCGGGGACTGCGACACCATCCACATTATCAAGGCATCCAACAACCACTTTGTTGGGGACTTCCCAGAGAAAATATGGTCGTGTGCGATGCTTACCATAGTTATGATTGGAGGAAACAACTTCACCGGCCGGAGCAATGGTGACATGTTGGGAGAGAAGATCAACATACCACCTGGGCCGCTATGTGCAAAGCGACCAGACCTCTGCAAGAACTGCTGGTGTTGTGAGGTCAGCGACGGGCAATGCTACCAGAGTCTCGAGGCCTGCCAGGTCAACTGCCCATTACCATCGCCACCGGCCATTTGA
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| Protein seq | MEVRNSSSFSHCNWAGIGCRNGQVTSLSFHNFQIANLIPASICSLKNLKYLDLSFNNLTGEFPTALYSCSALQFLDLSNNEFTGKLPEHVDKLSLGMQHLNLSRNSFIGDLPSAIGRFSKLKSLVLDSNNFNGTYQGAAIGGLVELEMLTLAYNPFKASLIPNEFGKLTKLTYLWLSWMNLIGNIPNVLSALTELELLDISINKLEGKNPKVDMEASEARDELDLSINKLTGSIPEDIVNLKNLKILYLYYNNLVGQIPSGVGMLPNLTDLRLFTCHGVFPVSLGDCDTIHIIKASNNHFVGDFPEKIWSCAMLTIVMIGGNNFTGRSNGDMLGEKINIPPGPLCAKRPDLCKNCWCCEVSDGQCYQSLEACQVNCPLPSPPAI |
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| Function | Receptor-like protein 52 [UniProtKB/Swiss-Prot:Q7FZR1] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_02g0227900 | OsNip_02t0227900-00 | Chr02 | 7179394 | 7184521 | - | RAP2018-11-26 | ||
| CDS seq | ATGGAAGTGAGAAACTCCAGTTCTTTCAGTCACTGTAATTGGGCAGGAATTGGTTGTAGAAATGGCCAGGTTACATCCCTCTCCTTCCACAACTTCCAAATAGCCAATCTAATCCCAGCTTCTATTTGTAGCCTCAAGAACCTGAAGTACTTAGACCTCTCTTTCAACAATCTCACCGGTGAGTTCCCTACGGCGCTCTACAGTTGCTCAGCTTTGCAGTTCCTTGACCTGTCCAACAATGAGTTCACTGGCAAACTTCCGGAACATGTTGACAAGCTGTCCTTGGGGATGCAGCACCTCAACCTGTCAAGAAATTCTTTCATCGGCGACCTGCCATCGGCTATTGGTCGGTTTTCCAAGCTCAAGTCGCTGGTGCTTGACAGTAACAATTTCAATGGGACCTATCAGGGTGCTGCCATTGGAGGTCTCGTGGAGCTTGAGATGCTAACATTGGCATATAATCCGTTCAAGGCTAGTCTAATTCCAAACGAGTTTGGCAAGCTGACTAAGCTGACATATCTGTGGCTATCATGGATGAACCTGATTGGTAACATCCCTAATGTTCTGTCAGCATTGACAGAGCTCGAGCTATTGGACATATCAATAAATAAGTTGGAAGGAAAAAATCCCAAAGTGGATATGGAAGCTTCAGAAGCTCGAGATGAGCTTGATTTGTCCATCAACAAGCTCACCGGATCAATACCAGAAGATATTGTGAACTTGAAGAACTTGAAAATTCTATACTTGTACTACAACAACCTCGTTGGACAAATCCCAAGTGGTGTTGGAATGCTGCCGAATCTTACCGACCTTCGGCTATTCACGTGCCATGGAGTGTTTCCGGTGAGCCTCGGGGACTGCGACACCATCCACATTATCAAGGCATCCAACAACCACTTTGTTGGGGACTTCCCAGAGAAAATATGGTCGTGTGCGATGCTTACCATAGTTATGATTGGAGGAAACAACTTCACCGGCCGGAGCAATGGTGACATGTTGGGAGAGAAGATCAACATACCACCTGGGCCGCTATGTGCAAAGCGACCAGACCTCTGCAAGAACTGCTGGTGTTGTGAGGTCAGCGACGGGCAATGCTACCAGAGTCTCGAGGCCTGCCAGGTCAACTGCCCATTACCATCGCCACCGGCCATTTGA
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| Protein seq | MEVRNSSSFSHCNWAGIGCRNGQVTSLSFHNFQIANLIPASICSLKNLKYLDLSFNNLTGEFPTALYSCSALQFLDLSNNEFTGKLPEHVDKLSLGMQHLNLSRNSFIGDLPSAIGRFSKLKSLVLDSNNFNGTYQGAAIGGLVELEMLTLAYNPFKASLIPNEFGKLTKLTYLWLSWMNLIGNIPNVLSALTELELLDISINKLEGKNPKVDMEASEARDELDLSINKLTGSIPEDIVNLKNLKILYLYYNNLVGQIPSGVGMLPNLTDLRLFTCHGVFPVSLGDCDTIHIIKASNNHFVGDFPEKIWSCAMLTIVMIGGNNFTGRSNGDMLGEKINIPPGPLCAKRPDLCKNCWCCEVSDGQCYQSLEACQVNCPLPSPPAI
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.000000 | 0.0 | 0.367437 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0557400 | SBH | 0.100366 | 0.170135 | 0.338275 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g13460 | SBH | 0.000000 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0227900 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0004310 | SBH | 0.053326 | 2.659473 | 0.663938 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0004510 | SBH | 0.087645 | 0.000000 | 0.391188 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0004170 | SBH | 0.137843 | 1.557139 | 0.736899 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0004250 | SBH | 0.061636 | 0.022630 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0004280 | SBH | 1.714308 | 1.291915 | 1.010436 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0120100 | RBH | 0.033817 | 0.273829 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0009320 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0122800 | RBH | 0.153188 | 0.493612 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0004180 | SBH | 0.043297 | 0.057747 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0003980 | SBH | 0.070042 | 4.234505 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0009740 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0004210 | SBH | 0.087713 | 0.227309 | 0.100002 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0004290 | SBH | 0.032945 | 0.534010 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G004310 | SBH | 0.850914 | 0.737580 | 0.524094 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0004260 | SBH | 0.000000 | 0.353235 | 0.384476 |
