Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsGoSa_02g0009740 | OGI:02021150 | 16/16 | GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | Chr02:7198619-7202896 | ||||||||
| Gene Symbol | RLCK70, OsRLCK70 | ||||||||||
| DNA seq | tcaaatggccggtggcgatggtaatgggcagttgacctggcaggcctcgagactctggtagcattgcccgtcgctgacctcacaacaccagcagttcttgcagaggtCtggtcgctttgcacatagcggcccaggtggtatgttgatctTCtctcccaacatgtcaccattgctccggccTattaaatattaattaattaattacaacgtcaaaacaataattaaatcattagcacagacacatatgtatgctatggtgaaaatgatggttatatggaacttgcacaaagaatatagaaacaaattgctcaaagaatcccttctatattcatgaattttaccttatctttacatgtccttgcgttttttttttatctcctttatatctattctattagttgactgttagattttttcaaaatgacttatatgtcatacgtacttatgctttctactttgtaaacataatctaaaaagaattgtgataaaatcaaactggacataattatgaccccaaatatagaaaatagttttttttttacgaatttgatgaaacacatacaaaagattcaccaagaaactgaaaaggcaaaagtttttttcagttgggtttaaatttcagtggaaacatttaaaaatatttacaaatattaaatttttggtctgctccatttgtttttttctttacataaacgaatctttttcaccttgaagctactccctccgtttcatcaggttataagacttttatagcaaacatctatatgaatgtaggcaatgctagaaagtcttataatataaaacagaggaagtatgctaattattatttctaaaagagtctaacggttaactcgcagtcgactagctagatgtatataggacggtcatatggtgctttaaggtgtctgggcttcaagggtttagaatgcacggattggaaattggaatccaaaataatcaagaactcagacacgtaaggaacgaaacaaaatttaggggaaaaatttaattgaaaactccgaggaacctaaggaattttctgtatatatattgatcagtattctcgagactaattaaaaagatgtttggactttgatttaagccacccccaaaaccatatacatacgccatcgatcttaattaaggtccacatgcaccagtgctaatccattttggcgttgagttttctgctgcaggtgaatctgcactacactaacatctacatcaacagacgcttttgaaccacgaacaattaatggcatcaacaattctggtcaataatccaccctttgttctaccctattttgcctaagatttattaggtgttcatgctaagagatccttttcgaatcattaagttcacctccaccaaaagaaacaaagtcaattaacaatatatgtggagataaactaagggcactcaacgttccatctcatctaactttcatagtgttaaatgcattttcatgtaaaacaaaaccgaggtatctaaaaagttaatgaggagagatgaaaaaagatgaagaaatcattagtaagaaactacctctacacataaatcaagaatgaaaataatagataaaaaaaaggagagataagagaggtgattggatgagagtttatgttgaaccaaccacacccgctgagtatatatatagttctttttttaacgacggcaaagcttgccattcattgaataaagcagggagcaatatttacatgtaaggagaaaaggtaatatttacaaagatcgaatagacactaaggcaatatctgcactaggcgtttggctcccgccgtagcccagagtcgataatttctaattaggattgcccttacattgcactgcaggaacagcagcgcatccgatgatcagcagcagcagaaacagcaaccgagaatcgacgttcttcatctccattatttgtggtctgatttttgcagggctcgatgatcttttagagaagaatataatctgcaggctctcgtgctggacgagtagacgatctatttatatagaggcctcgtgaatagtgttaattatcgcaatttttttagataatgttaattatcgtaattgatgctggctataaatagataattgtaacccgagccggtatttctgtaattagagacaattgatgccgtttattattagcaaggctgatatataatgctgcctgttgcgtttgctggactgatttctttctgttttctcgacaagttccataagaatatcttgacagcaatggaaagtaggcgtaatgggccaagacagaatgttagccttgggctgttgggccttggtgccgaggacgtgttcataccagttaatccgtccatacatttatactataaaattttgattttcacagctttactcacccttaataattttatagaccgataaagctgcaaaatggacacgtcgctaattgttgtctttcgaatcatgtctttactcttgcagtggaagatgctacgacgtactacatccttatgaacaatgcagccctggagcagggattgtaattttagtttcgaaatttccgaaattCcggtaattttggaaagagagaatctattatatgccactgagtttattacagatctatgagttgccactgactttatcacattctaaatatgccaccgacttttgcttaaattcttcaatttaccatcgccgtccggttatcctccattagcaccgtacaattttgcccaaatgaccaaaatacccctagaaaaaaacttacgaaatttgaataaaaattccaaaatatcatattataaacataagattgtaaatattcaaaatttggcaaaaacttaaaatccgatatttcaaaatttttgaaagtttctgtcccaggggtattttggtcatttcgataaatttgtacagtactaacggatactaactcagtgaacgtaaaagttaagcaaaagtcgatgacgatggtaaatcgtagaagttaagcaaaagtcgatggtaaatcgtagaagttaacaaagtcaatggtatatcatagacctgtgataaagtcagtggtatataatggattctctctttcgaaaaccctctcggcaagtcaatatctcggtcgatattttcgggttttctcaaTttttttgtgaatttaatcaaaattttagaaaatttcagccaaaaaaaacctaaatttcggttctatcaaaatggccgaaattttagccgaaatcaaaattgaaaaccctgtcctagagacacttatcagtcatgttcaaacgacaatagcatcactgtttgcatttatcaaagtagttctggtaggtgttctttttactaggtactccagtacataccccacaggggaggctcctgcactcctgcttatagctagctctgttgtttctacctcttaattagctttcatttttttttatgatgagatggattgaaaccagactctacatccatagagcggttgtacagttgtacacagccaattttgctttcatatatggaacatgttatttgagttttgcatacctgtttagggtgtaagcgagtagtcagattatcatcccctaaacatgtgatcatgttaagcaggtaaccccagcaaaatctagatggctttcaataaaaagctaggtctttattacctttattcttaaaagaaaaaaaaacatagacgtaggccacgatgcacattagccactcaataccattgcccacacaccatagctcctacaaggctacgacgaataaagtagatggagcttgatatgaatgtgtgtgtgcatctctgcctctctggccttgaactaacatgcaaaatacagagtaacatataaaatactcaggtggttttgtgtttaacaatatgttggaatcaatccagatagttggttcctagaaagatccagcctgacaaggttggcgagcttggacatgtctggaggtagcatgccagagaacaaattatttttcgctaaaaatctatggagtccagttgcagaagatgttggaattgcaccagagaacctattgtttcctatctaaatctatgagatgttggatgatatctaacttggcagagtaccggtgaagttgtttcctccaatcataactatggtaagcatcgcacacgaccatattttctctgggaagtccccaacaaagtggttgttggatgccttgataatgtggatggtgtcgcagtccccgaggctcaccggaaacactccatggcacgtgaatagccgaaggtcggtaagattcggcagcat
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| CDS seq | atgctgccgaatcttaccgaccttcggctattcacgtgccatggagtgtttccggtgagcctcggggactgcgacaccatccacattatcaaggcatccaacaaccactttgttggggacttcccagagaaaatatggtcgtgtgcgatgcttaccatagttatgattggaggaaacaacttcaccggccggagcaatggtgacatgttgggagaGAagatcaacataccacctgggccgctatgtgcaaagcgaccaGacctctgcaagaactgctggtgttgtgaggtcagcgacgggcaatgctaccagagtctcgaggcctgccaggtcaactgcccattaccatcgccaccggccatttga |
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| Protein seq | MLPNLTDLRLFTCHGVFPVSLGDCDTIHIIKASNNHFVGDFPEKIWSCAMLTIVMIGGNNFTGRSNGDMLGEKINIPPGPLCAKRPDLCKNCWCCEVSDGQCYQSLEACQVNCPLPSPPAI |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsGoSa_02g0009740 | OsGoSa_02g0009740.01 | Chr02 | 7198619 | 7202896 | - | NAM | ||
| CDS seq | atgctgccgaatcttaccgaccttcggctattcacgtgccatggagtgtttccggtgagcctcggggactgcgacaccatccacattatcaaggcatccaacaaccactttgttggggacttcccagagaaaatatggtcgtgtgcgatgcttaccatagttatgattggaggaaacaacttcaccggccggagcaatggtgacatgttgggagaGAagatcaacataccacctgggccgctatgtgcaaagcgaccaGacctctgcaagaactgctggtgttgtgaggtcagcgacgggcaatgctaccagagtctcgaggcctgccaggtcaactgcccattaccatcgccaccggccatttga
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| Protein seq | MLPNLTDLRLFTCHGVFPVSLGDCDTIHIIKASNNHFVGDFPEKIWSCAMLTIVMIGGNNFTGRSNGDMLGEKINIPPGPLCAKRPDLCKNCWCCEVSDGQCYQSLEACQVNCPLPSPPAI |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0227900 | SBH | 0.000000 | 0.0 | 0.367437 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g13450 | RBH | 0.0 | 0.0 | 0.418567 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0227900 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0009590 | SBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0009660 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0009540 | SBH | 0.304762 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0009390 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0009530 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0120200 | RBH | 0 | 0.0793995 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0009320 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0122500 | SBH | 0 | 0 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0009790 | RBH | 0.000000 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0009430 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0019170 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0009760 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0009480 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G009690 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0009480 | RBH | 0.0 | 0.0 | 0.0 |
