Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsPr106_02g0024600 | OGI:02001240 | 16/16 | PR 106 | Os127742RS1 | Gramene(+IsoSeq) | Chr02:25926945-25927952 | ||||||||
| Gene Symbol | LP2, OsLP2 | ||||||||||
| DNA seq | atgggtggaaacaagctatcgggaattgttcctccaagcataggaaaacttcgtgatttaattcaactctcgctagacgaaagtaatcttacgggtacaattgaagaatggattggaaaactcaccaagctacaacgcttaaatctccaaatgaacaactttgtcgggacaattccaccctccatttgcaatcttacacaattggtgtttttgtctattgcgaaaaatgacttaactggttctgtaccacctagctggggaggtcttcaaaacttgctgatactaaaccttagctataacaatctccaagggagcataccttttgagtttggtaatcttaaacaactctcacgactagacctttcgtcaaacaaatttagtggggaaattccttaaaccttgggccaatgtcagtactcagtagttactgatcattcaaatggaccaatatgtctggtcccttgctaatttcagttctataggaaacattccgaccatcttctaaggagctttcccataacaatttgtcaggccccttcaatttctccaaatgatttgaacctcactaaactagatatgtcttacaataaattccgaggagtaatacccttgtgtattcggtagtgctacagtgtttcactaattgggaattcgggaccatgtggttcgagaaaaaaattctagtacataaacatcggcttgccattcaggtttagattcaagttttaacaattcaatcggattgaagggaactatttggatatattgctccgttattcccacatcttgaaatcatgtaaagcaatcaattgtttactctaaaaagtgagcttttacattgtactcaaagtgtaaaacatcaattttcgttcattttttttttcgttttttcgctcaattagtggggatgtctacagtttcggaatagtatttctagaaatagtgcccggcaaaagaccttcggatcccgtgtttaacaatggactgaacactctcaattttgtctga
More
|
||||||||||
| CDS seq | atgggtggaaacaagctatcgggaattgttcctccaagcataggaaaacttcgtgatttaattcaactctcgctagacgaaagtaatcttacgggtacaattgaagaatggattggaaaactcaccaagctacaacgcttaaatctccaaatgaacaactttgtcgggacaattccaccctccatttgcaatcttacacaattggtgtttttgtctattgcgaaaaatgacttaactggttctgtaccacctagctggggaggtcttcaaaacttgctgatactaaaccttagctataacaatctccaagggagcataccttttgagtttggtaatcttaaacaactctcacgactagacctttcgaaacattccgaccatcttctaaggagctttcccataacaatttgtcaggccccttcaatttctccaaatgatttgaacctcactaaactagatatgtcttacaataaattccgaggagtaataccctttggggatgtctacagtttcggaatagtatttctagaaatagtgcccggcaaaagaccttcggatcccgtgtttaacaatggactgaacactctcaattttgtctga
More
|
||||||||||
| Protein seq | MGGNKLSGIVPPSIGKLRDLIQLSLDESNLTGTIEEWIGKLTKLQRLNLQMNNFVGTIPPSICNLTQLVFLSIAKNDLTGSVPPSWGGLQNLLILNLSYNNLQGSIPFEFGNLKQLSRLDLSKHSDHLLRSFPITICQAPSISPNDLNLTKLDMSYNKFRGVIPFGDVYSFGIVFLEIVPGKRPSDPVFNNGLNTLNFV |
||||||||||
| Function | Receptor-like protein 35 [UniProtKB/Swiss-Prot:Q9SRL7] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsPr106_02g0024600 | OsPr106_02g0024600.01 | Chr02 | 25926945 | 25927952 | + | NAM | ||
| CDS seq | atgggtggaaacaagctatcgggaattgttcctccaagcataggaaaacttcgtgatttaattcaactctcgctagacgaaagtaatcttacgggtacaattgaagaatggattggaaaactcaccaagctacaacgcttaaatctccaaatgaacaactttgtcgggacaattccaccctccatttgcaatcttacacaattggtgtttttgtctattgcgaaaaatgacttaactggttctgtaccacctagctggggaggtcttcaaaacttgctgatactaaaccttagctataacaatctccaagggagcataccttttgagtttggtaatcttaaacaactctcacgactagacctttcgaaacattccgaccatcttctaaggagctttcccataacaatttgtcaggccccttcaatttctccaaatgatttgaacctcactaaactagatatgtcttacaataaattccgaggagtaataccctttggggatgtctacagtttcggaatagtatttctagaaatagtgcccggcaaaagaccttcggatcccgtgtttaacaatggactgaacactctcaattttgtctga
More
|
|||||||
| Protein seq | MGGNKLSGIVPPSIGKLRDLIQLSLDESNLTGTIEEWIGKLTKLQRLNLQMNNFVGTIPPSICNLTQLVFLSIAKNDLTGSVPPSWGGLQNLLILNLSYNNLQGSIPFEFGNLKQLSRLDLSKHSDHLLRSFPITICQAPSISPNDLNLTKLDMSYNKFRGVIPFGDVYSFGIVFLEIVPGKRPSDPVFNNGLNTLNFV |
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 1.744725 | 5.268727 | 0.000000 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0211900 | SBH | 0.359565 | 0.246918 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g39670 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0211900 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0025070 | RBH | 2.266135 | 0.000000 | 2.324937 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0004510 | SBH | 0.087645 | 0.000000 | 0.391188 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0025050 | RBH | 0.778974 | 0.000000 | 0.521185 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0004250 | RBH | 0.061636 | 0.022630 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0017180 | SBH | 0.000000 | 2.430900 | 0.597021 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0396300 | RBH | 0.6404455 | 0.2594735 | 0.4822715 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0004280 | SBH | 0.048594 | 0.017924 | 0.096358 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0425400 | SBH | 1.672875 | 0.3362355 | 3.077142 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0004430 | SBH | 0.000000 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0004210 | SBH | 0.000000 | 0.847441 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0004560 | SBH | 8.232897 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0024690 | SBH | 0.035031 | 0.082412 | 0.021348 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0004290 | SBH | 0.032945 | 0.534010 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G004310 | SBH | 0.850914 | 0.737580 | 0.524094 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0024890 | SBH | 0.206270 | 0.000000 | 0.311611 |
