Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os11g07140 | OGI:11010520 | 16/16 | Nipponbare | IRGSP 1.0 | MSU | Chr11:3555763-3557873 | ||||||||
| Gene Symbol | RLCK314, OsRLCK314, 25L2, Hwi1 | ||||||||||
| DNA seq | ATGGCTTATAACCGTCTAGAAGGCCATCTACCGAGTTCGTTAAGCAACTTTTCCGCTCATCTCCAACGACTTCATTTAGGAGGAAATGCAATATCAGAGTCTTTTCCCTCTGGCATAGAACACCTCTCAAACTTGATTGCTTTATCAGTAGGAACTAATGACTTTACTGGTACCCTTCCAGAATGGCTTGGAAATCTTAAACAGTTGCAAATATTAAGTTTATATGACAACTATTTCACAGGGTTTATTCCATCATCCCTTTCGAATCTGTCTCAACTGGTAGCTCTCACACTACAATTTAACAAGCTGGATGGGCAGATACCAAGCTTAGGAAACCAGCTGCAAATGCTTCAAATATTCAATGTTTTGTACAATAATCTTCATGGTGTCATACCAAATGCGATCTTCAGTCTTCCGTCATTAATACAAGTTGACTTATCTTACAACAACCTACATGGACAACTTCCTATTGACATTGGCAATGCAAAACAACTAGTATCTTTAAAGCTTTCATCAAATAAGCTATCTGGAGATATTCTGAATGCTTTGGGTGATTGTGAAAGTCTTGAAGTCATCAGGTTAGATAGAAATAATTTTAGCGGGAGCATCCCCATTTCATTAGGCAACATAAGTAGCCTAAGAGTTCTCAATTTATCTCTCAATAACTTAACAGGGTCAATACCGGTATCTCTTAGCAATCTACAGTATCTTGAGAAACTAAACCTATCATTCAACCATCTTAAGGGCGAAATCCCAGCAAAAGGAATTTTCAAGAATGCTACAGCTTTCCAGATTGATGGAAATCAGGGGCTTTGTGGTGGGCCACCAGCCTTACACCTAACCACATGTCCTATTGTGCCATTAGTATCATCTAAGCACAATAACTTAATTTTACTGAAAGTGATGATCCCACTAGCCTGCATGGTGTCACTTGCTACAGTCATATCTATTATTTTTATTTGGAGGGCAAAACTGAAGAGAGAATCAGTATCGTTGCCATTTTTTGGTAGCAATTTCCCCAGAATTTCATACAATGCTCTTTTCAAAGCAACAGAGGGTTTCTCAACATCCAGTTTAATTGGCAGAGGGAGATATGGTTCTGTCTTTGTAGGGAAACTTTTTCAAGAAAACAACGTTGTTGCTGTGAAAGTTTTCAGCCTAGAGACAAGGGGAGCAGGAAAGAGCTTCATCGCAGAATGTAATGCCTTAAGAAATGTGCGGCATCGCAATATAGTTCCTATCCTCACTGCATGCTCTAGTATTGATTCTAAAGGCAATGATTTCAAAGCTCTAGTGTATGAGTTCATGTCACAAGGGGACTTATATAATTTACTATATACAACAAGACATGATAGCAACTCTTCAAAGTTGAACCACATTTCATTGGCTCAGAGGACAAGCATTGTGCTAGATGTATCAAGTGCATTAGAGTACTTGCACCATAACAACCAAGGAACTATTGTTCACTGTGATCTGAACCCTAGCAACATCCTTCTAGATAAAAATATGATTGCTCATGTTGGAGACTTTGGCCTTGCAAGATTCAAAATCGATTCTTCGTCACCTTCTCTAGGTGATTCAAACTTAACATCTTCACTCGCAACAAGGGGAACCATTGGATATATTGCACCAGGTACTGGTTGGGATTTTATCTTGTTTGGTATATATTGCTACCTATTTTCTTTTTACTATTATGTGACATGCTGATGTGTGCGAACTCAAATATTGCCAATGAAATTGTAGAATGCTCAGAGGGCGGTCAAGTTTCAACTGCCTCAGATGTATTCAGCTTTGGAGTTGTTCTCTTGGAACTATTTATTCGGAGAAGGCCAATAGACGACATGTTTAAGGATGGATTGAGCATTGCAAAGCATGTAGAGATGAACTTCCCTGACAGGATACTAGAGATTGTTGATCCCCAGGTGCAACACGAGCTGGACCTTTGCCAAGAAACACCAATGGCAGTAAAGGAGAAAGGCATACACTGCCTGCGCAGTGTGCTGAATATTGGACTCTGCTGCACCAACCCAACACCGAGTGAACGCATCAGCATGCAGGAGGCGGCTGCCAAGCTACACGGAATCAATGATTCATACCTTAGAGGAAACTAG
More
|
||||||||||
| CDS seq | ATGGCTTATAACCGTCTAGAAGGCCATCTACCGAGTTCGTTAAGCAACTTTTCCGCTCATCTCCAACGACTTCATTTAGGAGGAAATGCAATATCAGAGTCTTTTCCCTCTGGCATAGAACACCTCTCAAACTTGATTGCTTTATCAGTAGGAACTAATGACTTTACTGGTACCCTTCCAGAATGGCTTGGAAATCTTAAACAGTTGCAAATATTAAGTTTATATGACAACTATTTCACAGGGTTTATTCCATCATCCCTTTCGAATCTGTCTCAACTGGTAGCTCTCACACTACAATTTAACAAGCTGGATGGGCAGATACCAAGCTTAGGAAACCAGCTGCAAATGCTTCAAATATTCAATGTTTTGTACAATAATCTTCATGGTGTCATACCAAATGCGATCTTCAGTCTTCCGTCATTAATACAAGTTGACTTATCTTACAACAACCTACATGGACAACTTCCTATTGACATTGGCAATGCAAAACAACTAGTATCTTTAAAGCTTTCATCAAATAAGCTATCTGGAGATATTCTGAATGCTTTGGGTGATTGTGAAAGTCTTGAAGTCATCAGGTTAGATAGAAATAATTTTAGCGGGAGCATCCCCATTTCATTAGGCAACATAAGTAGCCTAAGAGTTCTCAATTTATCTCTCAATAACTTAACAGGGTCAATACCGGTATCTCTTAGCAATCTACAGTATCTTGAGAAACTAAACCTATCATTCAACCATCTTAAGGGCGAAATCCCAGCAAAAGGAATTTTCAAGAATGCTACAGCTTTCCAGATTGATGGAAATCAGGGGCTTTGTGGTGGGCCACCAGCCTTACACCTAACCACATGTCCTATTGTGCCATTAGTATCATCTAAGCACAATAACTTAATTTTACTGAAAGTGATGATCCCACTAGCCTGCATGGTGTCACTTGCTACAGTCATATCTATTATTTTTATTTGGAGGGCAAAACTGAAGAGAGAATCAGTATCGTTGCCATTTTTTGGTAGCAATTTCCCCAGAATTTCATACAATGCTCTTTTCAAAGCAACAGAGGGTTTCTCAACATCCAGTTTAATTGGCAGAGGGAGATATGGTTCTGTCTTTGTAGGGAAACTTTTTCAAGAAAACAACGTTGTTGCTGTGAAAGTTTTCAGCCTAGAGACAAGGGGAGCAGGAAAGAGCTTCATCGCAGAATGTAATGCCTTAAGAAATGTGCGGCATCGCAATATAGTTCCTATCCTCACTGCATGCTCTAGTATTGATTCTAAAGGCAATGATTTCAAAGCTCTAGTGTATGAGTTCATGTCACAAGGGGACTTATATAATTTACTATATACAACAAGACATGATAGCAACTCTTCAAAGTTGAACCACATTTCATTGGCTCAGAGGACAAGCATTGTGCTAGATGTATCAAGTGCATTAGAGTACTTGCACCATAACAACCAAGGAACTATTGTTCACTGTGATCTGAACCCTAGCAACATCCTTCTAGATAAAAATATGATTGCTCATGTTGGAGACTTTGGCCTTGCAAGATTCAAAATCGATTCTTCGTCACCTTCTCTAGGTGATTCAAACTTAACATCTTCACTCGCAACAAGGGGAACCATTGGATATATTGCACCAGAATGCTCAGAGGGCGGTCAAGTTTCAACTGCCTCAGATGTATTCAGCTTTGGAGTTGTTCTCTTGGAACTATTTATTCGGAGAAGGCCAATAGACGACATGTTTAAGGATGGATTGAGCATTGCAAAGCATGTAGAGATGAACTTCCCTGACAGGATACTAGAGATTGTTGATCCCCAGGTGCAACACGAGCTGGACCTTTGCCAAGAAACACCAATGGCAGTAAAGGAGAAAGGCATACACTGCCTGCGCAGTGTGCTGAATATTGGACTCTGCTGCACCAACCCAACACCGAGTGAACGCATCAGCATGCAGGAGGCGGCTGCCAAGCTACACGGAATCAATGATTCATACCTTAGAGGAAACTAG
More
|
||||||||||
| Protein seq | MAYNRLEGHLPSSLSNFSAHLQRLHLGGNAISESFPSGIEHLSNLIALSVGTNDFTGTLPEWLGNLKQLQILSLYDNYFTGFIPSSLSNLSQLVALTLQFNKLDGQIPSLGNQLQMLQIFNVLYNNLHGVIPNAIFSLPSLIQVDLSYNNLHGQLPIDIGNAKQLVSLKLSSNKLSGDILNALGDCESLEVIRLDRNNFSGSIPISLGNISSLRVLNLSLNNLTGSIPVSLSNLQYLEKLNLSFNHLKGEIPAKGIFKNATAFQIDGNQGLCGGPPALHLTTCPIVPLVSSKHNNLILLKVMIPLACMVSLATVISIIFIWRAKLKRESVSLPFFGSNFPRISYNALFKATEGFSTSSLIGRGRYGSVFVGKLFQENNVVAVKVFSLETRGAGKSFIAECNALRNVRHRNIVPILTACSSIDSKGNDFKALVYEFMSQGDLYNLLYTTRHDSNSSKLNHISLAQRTSIVLDVSSALEYLHHNNQGTIVHCDLNPSNILLDKNMIAHVGDFGLARFKIDSSSPSLGDSNLTSSLATRGTIGYIAPECSEGGQVSTASDVFSFGVVLLELFIRRRPIDDMFKDGLSIAKHVEMNFPDRILEIVDPQVQHELDLCQETPMAVKEKGIHCLRSVLNIGLCCTNPTPSERISMQEAAAKLHGINDSYLRGN |
||||||||||
| Function | Receptor kinase-like protein Xa21 [UniProtKB/Swiss-Prot:Q2R2D5] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os11g07140 | LOC_Os11g07140.1 | Chr11 | 3555763 | 3557873 | + | MSU_osa1r7 | ||
| CDS seq | ATGGCTTATAACCGTCTAGAAGGCCATCTACCGAGTTCGTTAAGCAACTTTTCCGCTCATCTCCAACGACTTCATTTAGGAGGAAATGCAATATCAGAGTCTTTTCCCTCTGGCATAGAACACCTCTCAAACTTGATTGCTTTATCAGTAGGAACTAATGACTTTACTGGTACCCTTCCAGAATGGCTTGGAAATCTTAAACAGTTGCAAATATTAAGTTTATATGACAACTATTTCACAGGGTTTATTCCATCATCCCTTTCGAATCTGTCTCAACTGGTAGCTCTCACACTACAATTTAACAAGCTGGATGGGCAGATACCAAGCTTAGGAAACCAGCTGCAAATGCTTCAAATATTCAATGTTTTGTACAATAATCTTCATGGTGTCATACCAAATGCGATCTTCAGTCTTCCGTCATTAATACAAGTTGACTTATCTTACAACAACCTACATGGACAACTTCCTATTGACATTGGCAATGCAAAACAACTAGTATCTTTAAAGCTTTCATCAAATAAGCTATCTGGAGATATTCTGAATGCTTTGGGTGATTGTGAAAGTCTTGAAGTCATCAGGTTAGATAGAAATAATTTTAGCGGGAGCATCCCCATTTCATTAGGCAACATAAGTAGCCTAAGAGTTCTCAATTTATCTCTCAATAACTTAACAGGGTCAATACCGGTATCTCTTAGCAATCTACAGTATCTTGAGAAACTAAACCTATCATTCAACCATCTTAAGGGCGAAATCCCAGCAAAAGGAATTTTCAAGAATGCTACAGCTTTCCAGATTGATGGAAATCAGGGGCTTTGTGGTGGGCCACCAGCCTTACACCTAACCACATGTCCTATTGTGCCATTAGTATCATCTAAGCACAATAACTTAATTTTACTGAAAGTGATGATCCCACTAGCCTGCATGGTGTCACTTGCTACAGTCATATCTATTATTTTTATTTGGAGGGCAAAACTGAAGAGAGAATCAGTATCGTTGCCATTTTTTGGTAGCAATTTCCCCAGAATTTCATACAATGCTCTTTTCAAAGCAACAGAGGGTTTCTCAACATCCAGTTTAATTGGCAGAGGGAGATATGGTTCTGTCTTTGTAGGGAAACTTTTTCAAGAAAACAACGTTGTTGCTGTGAAAGTTTTCAGCCTAGAGACAAGGGGAGCAGGAAAGAGCTTCATCGCAGAATGTAATGCCTTAAGAAATGTGCGGCATCGCAATATAGTTCCTATCCTCACTGCATGCTCTAGTATTGATTCTAAAGGCAATGATTTCAAAGCTCTAGTGTATGAGTTCATGTCACAAGGGGACTTATATAATTTACTATATACAACAAGACATGATAGCAACTCTTCAAAGTTGAACCACATTTCATTGGCTCAGAGGACAAGCATTGTGCTAGATGTATCAAGTGCATTAGAGTACTTGCACCATAACAACCAAGGAACTATTGTTCACTGTGATCTGAACCCTAGCAACATCCTTCTAGATAAAAATATGATTGCTCATGTTGGAGACTTTGGCCTTGCAAGATTCAAAATCGATTCTTCGTCACCTTCTCTAGGTGATTCAAACTTAACATCTTCACTCGCAACAAGGGGAACCATTGGATATATTGCACCAGAATGCTCAGAGGGCGGTCAAGTTTCAACTGCCTCAGATGTATTCAGCTTTGGAGTTGTTCTCTTGGAACTATTTATTCGGAGAAGGCCAATAGACGACATGTTTAAGGATGGATTGAGCATTGCAAAGCATGTAGAGATGAACTTCCCTGACAGGATACTAGAGATTGTTGATCCCCAGGTGCAACACGAGCTGGACCTTTGCCAAGAAACACCAATGGCAGTAAAGGAGAAAGGCATACACTGCCTGCGCAGTGTGCTGAATATTGGACTCTGCTGCACCAACCCAACACCGAGTGAACGCATCAGCATGCAGGAGGCGGCTGCCAAGCTACACGGAATCAATGATTCATACCTTAGAGGAAACTAG
More
|
|||||||
| Protein seq | MAYNRLEGHLPSSLSNFSAHLQRLHLGGNAISESFPSGIEHLSNLIALSVGTNDFTGTLPEWLGNLKQLQILSLYDNYFTGFIPSSLSNLSQLVALTLQFNKLDGQIPSLGNQLQMLQIFNVLYNNLHGVIPNAIFSLPSLIQVDLSYNNLHGQLPIDIGNAKQLVSLKLSSNKLSGDILNALGDCESLEVIRLDRNNFSGSIPISLGNISSLRVLNLSLNNLTGSIPVSLSNLQYLEKLNLSFNHLKGEIPAKGIFKNATAFQIDGNQGLCGGPPALHLTTCPIVPLVSSKHNNLILLKVMIPLACMVSLATVISIIFIWRAKLKRESVSLPFFGSNFPRISYNALFKATEGFSTSSLIGRGRYGSVFVGKLFQENNVVAVKVFSLETRGAGKSFIAECNALRNVRHRNIVPILTACSSIDSKGNDFKALVYEFMSQGDLYNLLYTTRHDSNSSKLNHISLAQRTSIVLDVSSALEYLHHNNQGTIVHCDLNPSNILLDKNMIAHVGDFGLARFKIDSSSPSLGDSNLTSSLATRGTIGYIAPECSEGGQVSTASDVFSFGVVLLELFIRRRPIDDMFKDGLSIAKHVEMNFPDRILEIVDPQVQHELDLCQETPMAVKEKGIHCLRSVLNIGLCCTNPTPSERISMQEAAAKLHGINDSYLRGN
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0172400 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g07225 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0172400 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0004950 | RBH | 0.623089 | 0.000000 | 0.563668 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0004920 | SBH | 0.310265 | 0.0 | 0.101677 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0004900 | SBH | 0.055700 | 1.280922 | 0.881881 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0004840 | RBH | 0.216128 | 0.044515 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0004730 | SBH | 0.153046 | 0.0 | 1.074549 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0060700 | SBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0004810 | RBH | 0.297846 | 0.021683 | 0.170285 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0061400 | SBH | 0.0183825 | 0.0093325 | 0.0057745 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0004730 | SBH | 0.000000 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0004780 | SBH | 0.074646 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0004860 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0004880 | SBH | 1.214927 | 0.0 | 0.097615 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0004850 | SBH | 0.056974 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G004890 | SBH | 0.838538 | 0.000000 | 0.368926 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0004810 | RBH | 4.826402 | 0.871399 | 1.661659 |
