Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os11g07225 | OGI:11010520 | 16/16 | Nipponbare | IRGSP 1.0 | MSU | Chr11:3627548-3631952 | ||||||||
| Gene Symbol | RLCK312, OsRLCK312, - | ||||||||||
| DNA seq | ATGAAGGTTACTACTGCATCTGGACATCTCCTCTTGGTGTTGTTTGCTTCCATCTTCCACCCAGCCGTCAGCTCAATTTCAGGAAATGGAACAGATCGACTTGCATTGCTAGAATTCAAGAATGCAATCACTCACGATCCACAGAAATCCCTAATGTCTTGGAATGACAGCAATCACTTGTGCAGCTGGGAAGGTGTCTCGTGCAGCTCCAAGAATCCACCTCGTGTCACCTCTATTGATCTCAGCAACCAAAATCTTGCAGGCAACATTTCCCCTTCACTTGGCAACCTGACATTCCTCAAGCATCTGTCATTGGCGACGAACGAGTTCACCGGACGGATTCCTGAATCTCTCGGCCACCTGCGTCGTCTCCGATCACTCTACCTGAGCAACAACACGCTCCAGGGGATCATACCGAGCTTCGCCAACTGCTCCGATCTGAGGGTGCTATGGCTGGATCACAACGAGCTCACCGGAGGACTCCCCGACGGCCTGCCTCTTGGCCTCGAGGAATTGCAGGTCTCGTCGAACACTCTCGTCGGGACTATCCCTCCCTCGCTCGGCAACGTCACGACGCTGAGGATGCTTCGCTTCGCGTTCAACGGCATCGAGGGTGGCATCCCAGGCGAGCTCGCGGCGCTGCGCGAGATGGAGATACTGACCATCGGCGGCAACCGGTTGTCAGGTGGGTTTCCAGAGCCGATCATGAACATGTCGGTGCTCATTCGGCTCAGCCTCGAAACCAACCGCTTCAGCGGCAAGATGCCATCCGGCATTGGTACCTCGCTGCCTAATCTATGGCGGCTCTTCATTGGCGGCAACTTCTTCCAAGGGAATCTCCCTTCTTCCTTGGCAAATGCTTCGAATCTTGTTGATCTTGATATTTCTCAGAATAACTTTGTTGGGGTGGTGCCTGCTTTCATTGGCAAGCTTGCCAATCTTACATGGTTGAATCTTGAGATGAATCAGCTCCATGCTCGTAGCAAGCAAGATTGGGATTTCATGGATAGCTTAACCAACTGCACTCAGCTACAAGCATTATCTATGGCTGGGAATCAGCTGGAAGGACATTTACCAAATTCAGTAGGAAATTTTTCTGTTCAGCTTCAGCGTCTTTACTTGGGACAGAATCAATTATCAGGGAGTTTTCCTTCAGGCATTGAAAACCTTCCAAACCTGATAGTTTTTGGACTGGATTACAACAGGTTTACAGGTTCTGTGCCACCATGGCTCGGCGGATTGATAACATTGCAGGTACTAAGCTTGACTAACAACAATTTTACAGGGTATATTCCTTCCTCCCTTTCCAATTTGTCACATTTGGTAGAGCTTTATCTGCAATCAAATCAGTTGCTTGGAAACATACCTTCAAGCTTTGGAAAACTTCAGTTCCTTACAAGAATCGACATTTCTGATAACAGTCTTAATGGTAGTCTGCCAAAGGAGATCTTCAGGATTCCGACGATAGCAGAGGTTGGGTTCTCATTCAACAATCTCAGTGGAGAACTTCCTACAGAAGTAGGGTATGCCAAGCAACTCCGCAGTTTGCATCTCTCATCTAATAATCTGTCGGGAGATATTCCTAATACTTTGGGTAACTGTGAAAATTTGCAAGAAGTGGTGCTAGACCAGAATAATTTTGGTGGAAGTATTCCTGCTTCGCTTGGCAAATTAATTAGCCTGAAATCTCTCAACCTGTCACACAATATATTAAATGGTTCAATACCAGTGTCACTTGGTGATCTTGAGCTTCTTGAGCAGATAGATTTGTCGTTCAACCATCTTAGTGGTCAGGTCCCAACTAAAGGAATTTTCAAGAATTCAACTGCCACGCATATGGATGGAAATTTGGGGCTTTGTGGAGGTGCACCGGAGTTACACCTACCTGAATGTCCCATTGTGCCTTCAAATAAAAGTAAACACAAGCTATATGTAACACTGAAAGTTGTGATCCCATTAGCCAGCACGGTGACACTTGCCATAGTGATATTGGTCATATTTATCTGGAAGGGAAAACGAAGGGAAAAATCAATATCTCTATCCTCATCTGGTAGAGAATTTCCCAAAGTTTCTTATAGGGATCTTGCTAGAGCAACAAATGGGTTCTCAACATCCAATTTAATTGGAAGAGGGAGATATAGTTCTGTATACCAAGGACAACTATTTCATGATATAAATGCAGTTGCTATCAAGGTCTTCAGTCTAGAGACAAGGGGAGCACAAAAGAGCTTCATTGCAGAGTGCAATGCTTTGAGAAATGTGCGACATCGCAATCTAGTTCCTATCTTAACGGCATGCTCAAGCATTGATTCAAGTGGGAATGACTTCAAAGCATTGGCATATAAATTCATGCCAAGAGGAGACTTGCATAAATTACTGTACTCAAATCCAAATGATGAAAGATCTTCAGGTATATGCTATATTTCACTGGCCCAAAGGTTAAGTATTGCGGTTGACTTGTCTGATGCATTGGCATACCTACACCACAGTCATCAAGGAACAATTATTCATTGTGATCTCAAACCTAGCAATATTCTTTTGGATGACAATATGATAGCTCATGTTGGAGACTTTGGACTAGCAAGGTTCAGAATTGATTCCAAAACATCTTTCGGTAACTCAAATTCTACAATAAATGGCACCATAGGATATGTTGCTCCAGGTATATGTGGTCTGTTTTACTCTTTACTTTCTTACTGATTTACTTAAGGGAACAGTTTCAAAAAATTTAATTTATGTGAACATTTGAACTAAACTCTTACTACATGCATACTGCAGAATGTGCCATAGGTGGTCAAGTTTCAACTGCTGCAGACGTATACAGCTTCGGGGTTGTTCTCCTTGAGATTTTCATAAGGAGGAGGCCAACAGACGACATGTTCAAGGATGGATTGACCATTGCAAAGTATACAGAGATAAACATCCCTGATAAGATGCTGCAGATTGTTGATCCTCAGCTAGTACAAGAGTTGGGCCTGTCCCAAGAAGATCCAGTGCGTGTCGATGAAACTGCAACACATTGCCTTCTTTCTGTACTGAACATTGGACTGTGCTGCACCAAGTCATCCCCGAGTGAGCGCATCAGCATGCAGGAGGTGGCTACCAAGCTACATAGAATCAGGGAGTCATATCTTAGATGAATACTACAGGAACACTGTCTGTCCTATCAGAACTTCAAATAAAAGTAAACACAAGCTATCTGTCGTGGTTAAAGTAGTGATCCCATTGGCCATCATTGTGGCACTTGCCATAGTGATACTGATCTTGTTTATCTGGAAGGGGAAGAAAAGGACAAATTCAATACCTTTGCCTTCGTTTGATACTGAATTTCCCAAAGTTTCCTATAGTGATCTTGCTAGAGCAACTAACAGATTCTCGATAGCCAATTTAATTGGCAAAGGGAGATATAGTTCTGTATACCAAAGACAACTATTTCAAGACTTAAATGTAGTTGCTATCAAGGTCTTCAGTCTAGAGACAAGGGGAGCACAAAAGAGCTTCATTGCAGAGTGTAGTACTTTGAGAAATGTGTGGCATCGCAATTTAGTTCCTATCTTAACAGCGTGTTCAAGCATCGATTCTAGTGGAAATGACTTCAAAGCACTCGTGTATCAATTCATGCCACGAGGGGACTTGCATAAATTGCTGTACTCAACCAGGGATGATGGGGATGCTTCAAATCTGAACCACACTACATTGGCTCAAAGGATAAATATTGTTGTGGATGTATCAGATGCATTGGAGTATCTGCACCATAACAACCAAGGTACTATTATTCATTGTGATCTGAAGCCAAGCAACATCCTTCTAGGTGACAATATGATTGCTCACGTCGGAGATTTTGGCCTTGCAAGATTCAGAATTCATTCGTCAACATCTCTGGGTGATTCAAACTCAATTTCTTCCTTTGCAATAAAGGGAACCATTGGATACATTGCTCCACGTAATGGTGAGCTTTTATCTTGTTTTGTGATGCTACATGTTTATTTAGCATGCCTATATATGTTAGTTTTACACTTGTCATGTGCAATCTATAGAATGCTCAGAGGGCGGTCAAGTTTCAACTGCCTCAGATGTATTCAGCTTTGGAGTTGTTCTTTTGGAATTATTTATTCGGAGAAGGCCAACAGACGACATGTTTAAGGATGGATTGAGCATTGCAAAGCATGTAGAGGTGAACTTCCCTGACAGGATACTAGAGATTGTTGATCCCCAGCTGCAACAAGAGTTGGACCTTTGCCAAGAAACTCCAATGGCGGTAAAGGAGAAAGGTGTACACTGCCTGCGCAGTGTGCTAAATATTGGACTCTGCTGCACCAAGCCAACACCGAGTGAACGCATCAGCATCCAGGAGGCGTCTGCCAAGCTGCACGGAATTAAACATGCATATCTTAGAGAAAACTAA
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| CDS seq | ATGAAGGTTACTACTGCATCTGGACATCTCCTCTTGGTGTTGTTTGCTTCCATCTTCCACCCAGCCGTCAGCTCAATTTCAGGAAATGGAACAGATCGACTTGCATTGCTAGAATTCAAGAATGCAATCACTCACGATCCACAGAAATCCCTAATGTCTTGGAATGACAGCAATCACTTGTGCAGCTGGGAAGGTGTCTCGTGCAGCTCCAAGAATCCACCTCGTGTCACCTCTATTGATCTCAGCAACCAAAATCTTGCAGGCAACATTTCCCCTTCACTTGGCAACCTGACATTCCTCAAGCATCTGTCATTGGCGACGAACGAGTTCACCGGACGGATTCCTGAATCTCTCGGCCACCTGCGTCGTCTCCGATCACTCTACCTGAGCAACAACACGCTCCAGGGGATCATACCGAGCTTCGCCAACTGCTCCGATCTGAGGGTGCTATGGCTGGATCACAACGAGCTCACCGGAGGACTCCCCGACGGCCTGCCTCTTGGCCTCGAGGAATTGCAGGTCTCGTCGAACACTCTCGTCGGGACTATCCCTCCCTCGCTCGGCAACGTCACGACGCTGAGGATGCTTCGCTTCGCGTTCAACGGCATCGAGGGTGGCATCCCAGGCGAGCTCGCGGCGCTGCGCGAGATGGAGATACTGACCATCGGCGGCAACCGGTTGTCAGGTGGGTTTCCAGAGCCGATCATGAACATGTCGGTGCTCATTCGGCTCAGCCTCGAAACCAACCGCTTCAGCGGCAAGATGCCATCCGGCATTGGTACCTCGCTGCCTAATCTATGGCGGCTCTTCATTGGCGGCAACTTCTTCCAAGGGAATCTCCCTTCTTCCTTGGCAAATGCTTCGAATCTTGTTGATCTTGATATTTCTCAGAATAACTTTGTTGGGGTGGTGCCTGCTTTCATTGGCAAGCTTGCCAATCTTACATGGTTGAATCTTGAGATGAATCAGCTCCATGCTCGTAGCAAGCAAGATTGGGATTTCATGGATAGCTTAACCAACTGCACTCAGCTACAAGCATTATCTATGGCTGGGAATCAGCTGGAAGGACATTTACCAAATTCAGTAGGAAATTTTTCTGTTCAGCTTCAGCGTCTTTACTTGGGACAGAATCAATTATCAGGGAGTTTTCCTTCAGGCATTGAAAACCTTCCAAACCTGATAGTTTTTGGACTGGATTACAACAGGTTTACAGGTTCTGTGCCACCATGGCTCGGCGGATTGATAACATTGCAGGTACTAAGCTTGACTAACAACAATTTTACAGGGTATATTCCTTCCTCCCTTTCCAATTTGTCACATTTGGTAGAGCTTTATCTGCAATCAAATCAGTTGCTTGGAAACATACCTTCAAGCTTTGGAAAACTTCAGTTCCTTACAAGAATCGACATTTCTGATAACAGTCTTAATGGTAGTCTGCCAAAGGAGATCTTCAGGATTCCGACGATAGCAGAGGTTGGGTTCTCATTCAACAATCTCAGTGGAGAACTTCCTACAGAAGTAGGGTATGCCAAGCAACTCCGCAGTTTGCATCTCTCATCTAATAATCTGTCGGGAGATATTCCTAATACTTTGGGTAACTGTGAAAATTTGCAAGAAGTGGTGCTAGACCAGAATAATTTTGGTGGAAGTATTCCTGCTTCGCTTGGCAAATTAATTAGCCTGAAATCTCTCAACCTGTCACACAATATATTAAATGGTTCAATACCAGTGTCACTTGGTGATCTTGAGCTTCTTGAGCAGATAGATTTGTCGTTCAACCATCTTAGTGGTCAGGTCCCAACTAAAGGAATTTTCAAGAATTCAACTGCCACGCATATGGATGGAAATTTGGGGCTTTGTGGAGGTGCACCGGAGTTACACCTACCTGAATGTCCCATTGTGCCTTCAAATAAAAGTAAACACAAGCTATATGTAACACTGAAAGTTGTGATCCCATTAGCCAGCACGGTGACACTTGCCATAGTGATATTGGTCATATTTATCTGGAAGGGAAAACGAAGGGAAAAATCAATATCTCTATCCTCATCTGGTAGAGAATTTCCCAAAGTTTCTTATAGGGATCTTGCTAGAGCAACAAATGGGTTCTCAACATCCAATTTAATTGGAAGAGGGAGATATAGTTCTGTATACCAAGGACAACTATTTCATGATATAAATGCAGTTGCTATCAAGGTCTTCAGTCTAGAGACAAGGGGAGCACAAAAGAGCTTCATTGCAGAGTGCAATGCTTTGAGAAATGTGCGACATCGCAATCTAGTTCCTATCTTAACGGCATGCTCAAGCATTGATTCAAGTGGGAATGACTTCAAAGCATTGGCATATAAATTCATGCCAAGAGGAGACTTGCATAAATTACTGTACTCAAATCCAAATGATGAAAGATCTTCAGGTATATGCTATATTTCACTGGCCCAAAGGTTAAGTATTGCGGTTGACTTGTCTGATGCATTGGCATACCTACACCACAGTCATCAAGGAACAATTATTCATTGTGATCTCAAACCTAGCAATATTCTTTTGGATGACAATATGATAGCTCATGTTGGAGACTTTGGACTAGCAAGGTTCAGAATTGATTCCAAAACATCTTTCGGTAACTCAAATTCTACAATAAATGGCACCATAGGATATGTTGCTCCAGAATGTGCCATAGGTGGTCAAGTTTCAACTGCTGCAGACGTATACAGCTTCGGGGTTGTTCTCCTTGAGATTTTCATAAGGAGGAGGCCAACAGACGACATGTTCAAGGATGGATTGACCATTGCAAAGTATACAGAGATAAACATCCCTGATAAGATGCTGCAGATTGTTGATCCTCAGCTAGTACAAGAGTTGGGCCTGTCCCAAGAAGATCCAGTGCGTGTCGATGAAACTGCAACACATTGCCTTCTTTCTGTACTGAACATTGGACTGTGCTGCACCAAGTCATCCCCGAGTGAGCGCATCAGCATGCAGGAGGGGAAGAAAAGGACAAATTCAATACCTTTGCCTTCGTTTGATACTGAATTTCCCAAAGTTTCCTATAGTGATCTTGCTAGAGCAACTAACAGATTCTCGATAGCCAATTTAATTGGCAAAGGGAGATATAGTTCTGTATACCAAAGACAACTATTTCAAGACTTAAATGTAGTTGCTATCAAGGTCTTCAGTCTAGAGACAAGGGGAGCACAAAAGAGCTTCATTGCAGAGTGTAGTACTTTGAGAAATGTGTGGCATCGCAATTTAGTTCCTATCTTAACAGCGTGTTCAAGCATCGATTCTAGTGGAAATGACTTCAAAGCACTCGTGTATCAATTCATGCCACGAGGGGACTTGCATAAATTGCTGTACTCAACCAGGGATGATGGGGATGCTTCAAATCTGAACCACACTACATTGGCTCAAAGGATAAATATTGTTGTGGATGTATCAGATGCATTGGAGTATCTGCACCATAACAACCAAGGTACTATTATTCATTGTGATCTGAAGCCAAGCAACATCCTTCTAGGTGACAATATGATTGCTCACGTCGGAGATTTTGGCCTTGCAAGATTCAGAATTCATTCGTCAACATCTCTGGGTGATTCAAACTCAATTTCTTCCTTTGCAATAAAGGGAACCATTGGATACATTGCTCCACGTAATGAATGCTCAGAGGGCGGTCAAGTTTCAACTGCCTCAGATGTATTCAGCTTTGGAGTTGTTCTTTTGGAATTATTTATTCGGAGAAGGCCAACAGACGACATGTTTAAGGATGGATTGAGCATTGCAAAGCATGTAGAGGTGAACTTCCCTGACAGGATACTAGAGATTGTTGATCCCCAGCTGCAACAAGAGTTGGACCTTTGCCAAGAAACTCCAATGGCGGTAAAGGAGAAAGGTGTACACTGCCTGCGCAGTGTGCTAAATATTGGACTCTGCTGCACCAAGCCAACACCGAGTGAACGCATCAGCATCCAGGAGGCGTCTGCCAAGCTGCACGGAATTAAACATGCATATCTTAGAGAAAACTAA
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| Protein seq | MKVTTASGHLLLVLFASIFHPAVSSISGNGTDRLALLEFKNAITHDPQKSLMSWNDSNHLCSWEGVSCSSKNPPRVTSIDLSNQNLAGNISPSLGNLTFLKHLSLATNEFTGRIPESLGHLRRLRSLYLSNNTLQGIIPSFANCSDLRVLWLDHNELTGGLPDGLPLGLEELQVSSNTLVGTIPPSLGNVTTLRMLRFAFNGIEGGIPGELAALREMEILTIGGNRLSGGFPEPIMNMSVLIRLSLETNRFSGKMPSGIGTSLPNLWRLFIGGNFFQGNLPSSLANASNLVDLDISQNNFVGVVPAFIGKLANLTWLNLEMNQLHARSKQDWDFMDSLTNCTQLQALSMAGNQLEGHLPNSVGNFSVQLQRLYLGQNQLSGSFPSGIENLPNLIVFGLDYNRFTGSVPPWLGGLITLQVLSLTNNNFTGYIPSSLSNLSHLVELYLQSNQLLGNIPSSFGKLQFLTRIDISDNSLNGSLPKEIFRIPTIAEVGFSFNNLSGELPTEVGYAKQLRSLHLSSNNLSGDIPNTLGNCENLQEVVLDQNNFGGSIPASLGKLISLKSLNLSHNILNGSIPVSLGDLELLEQIDLSFNHLSGQVPTKGIFKNSTATHMDGNLGLCGGAPELHLPECPIVPSNKSKHKLYVTLKVVIPLASTVTLAIVILVIFIWKGKRREKSISLSSSGREFPKVSYRDLARATNGFSTSNLIGRGRYSSVYQGQLFHDINAVAIKVFSLETRGAQKSFIAECNALRNVRHRNLVPILTACSSIDSSGNDFKALAYKFMPRGDLHKLLYSNPNDERSSGICYISLAQRLSIAVDLSDALAYLHHSHQGTIIHCDLKPSNILLDDNMIAHVGDFGLARFRIDSKTSFGNSNSTINGTIGYVAPECAIGGQVSTAADVYSFGVVLLEIFIRRRPTDDMFKDGLTIAKYTEINIPDKMLQIVDPQLVQELGLSQEDPVRVDETATHCLLSVLNIGLCCTKSSPSERISMQEGKKRTNSIPLPSFDTEFPKVSYSDLARATNRFSIANLIGKGRYSSVYQRQLFQDLNVVAIKVFSLETRGAQKSFIAECSTLRNVWHRNLVPILTACSSIDSSGNDFKALVYQFMPRGDLHKLLYSTRDDGDASNLNHTTLAQRINIVVDVSDALEYLHHNNQGTIIHCDLKPSNILLGDNMIAHVGDFGLARFRIHSSTSLGDSNSISSFAIKGTIGYIAPRNECSEGGQVSTASDVFSFGVVLLELFIRRRPTDDMFKDGLSIAKHVEVNFPDRILEIVDPQLQQELDLCQETPMAVKEKGVHCLRSVLNIGLCCTKPTPSERISIQEASAKLHGIKHAYLREN |
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| Function | Probable LRR receptor-like serine/threonine-protein kinase At3g47570 [UniProtKB/Swiss-Prot:C0LGP4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os11g07225 | LOC_Os11g07225.1 | Chr11 | 3627548 | 3631952 | + | MSU_osa1r7 | ||
| CDS seq | ATGAAGGTTACTACTGCATCTGGACATCTCCTCTTGGTGTTGTTTGCTTCCATCTTCCACCCAGCCGTCAGCTCAATTTCAGGAAATGGAACAGATCGACTTGCATTGCTAGAATTCAAGAATGCAATCACTCACGATCCACAGAAATCCCTAATGTCTTGGAATGACAGCAATCACTTGTGCAGCTGGGAAGGTGTCTCGTGCAGCTCCAAGAATCCACCTCGTGTCACCTCTATTGATCTCAGCAACCAAAATCTTGCAGGCAACATTTCCCCTTCACTTGGCAACCTGACATTCCTCAAGCATCTGTCATTGGCGACGAACGAGTTCACCGGACGGATTCCTGAATCTCTCGGCCACCTGCGTCGTCTCCGATCACTCTACCTGAGCAACAACACGCTCCAGGGGATCATACCGAGCTTCGCCAACTGCTCCGATCTGAGGGTGCTATGGCTGGATCACAACGAGCTCACCGGAGGACTCCCCGACGGCCTGCCTCTTGGCCTCGAGGAATTGCAGGTCTCGTCGAACACTCTCGTCGGGACTATCCCTCCCTCGCTCGGCAACGTCACGACGCTGAGGATGCTTCGCTTCGCGTTCAACGGCATCGAGGGTGGCATCCCAGGCGAGCTCGCGGCGCTGCGCGAGATGGAGATACTGACCATCGGCGGCAACCGGTTGTCAGGTGGGTTTCCAGAGCCGATCATGAACATGTCGGTGCTCATTCGGCTCAGCCTCGAAACCAACCGCTTCAGCGGCAAGATGCCATCCGGCATTGGTACCTCGCTGCCTAATCTATGGCGGCTCTTCATTGGCGGCAACTTCTTCCAAGGGAATCTCCCTTCTTCCTTGGCAAATGCTTCGAATCTTGTTGATCTTGATATTTCTCAGAATAACTTTGTTGGGGTGGTGCCTGCTTTCATTGGCAAGCTTGCCAATCTTACATGGTTGAATCTTGAGATGAATCAGCTCCATGCTCGTAGCAAGCAAGATTGGGATTTCATGGATAGCTTAACCAACTGCACTCAGCTACAAGCATTATCTATGGCTGGGAATCAGCTGGAAGGACATTTACCAAATTCAGTAGGAAATTTTTCTGTTCAGCTTCAGCGTCTTTACTTGGGACAGAATCAATTATCAGGGAGTTTTCCTTCAGGCATTGAAAACCTTCCAAACCTGATAGTTTTTGGACTGGATTACAACAGGTTTACAGGTTCTGTGCCACCATGGCTCGGCGGATTGATAACATTGCAGGTACTAAGCTTGACTAACAACAATTTTACAGGGTATATTCCTTCCTCCCTTTCCAATTTGTCACATTTGGTAGAGCTTTATCTGCAATCAAATCAGTTGCTTGGAAACATACCTTCAAGCTTTGGAAAACTTCAGTTCCTTACAAGAATCGACATTTCTGATAACAGTCTTAATGGTAGTCTGCCAAAGGAGATCTTCAGGATTCCGACGATAGCAGAGGTTGGGTTCTCATTCAACAATCTCAGTGGAGAACTTCCTACAGAAGTAGGGTATGCCAAGCAACTCCGCAGTTTGCATCTCTCATCTAATAATCTGTCGGGAGATATTCCTAATACTTTGGGTAACTGTGAAAATTTGCAAGAAGTGGTGCTAGACCAGAATAATTTTGGTGGAAGTATTCCTGCTTCGCTTGGCAAATTAATTAGCCTGAAATCTCTCAACCTGTCACACAATATATTAAATGGTTCAATACCAGTGTCACTTGGTGATCTTGAGCTTCTTGAGCAGATAGATTTGTCGTTCAACCATCTTAGTGGTCAGGTCCCAACTAAAGGAATTTTCAAGAATTCAACTGCCACGCATATGGATGGAAATTTGGGGCTTTGTGGAGGTGCACCGGAGTTACACCTACCTGAATGTCCCATTGTGCCTTCAAATAAAAGTAAACACAAGCTATATGTAACACTGAAAGTTGTGATCCCATTAGCCAGCACGGTGACACTTGCCATAGTGATATTGGTCATATTTATCTGGAAGGGAAAACGAAGGGAAAAATCAATATCTCTATCCTCATCTGGTAGAGAATTTCCCAAAGTTTCTTATAGGGATCTTGCTAGAGCAACAAATGGGTTCTCAACATCCAATTTAATTGGAAGAGGGAGATATAGTTCTGTATACCAAGGACAACTATTTCATGATATAAATGCAGTTGCTATCAAGGTCTTCAGTCTAGAGACAAGGGGAGCACAAAAGAGCTTCATTGCAGAGTGCAATGCTTTGAGAAATGTGCGACATCGCAATCTAGTTCCTATCTTAACGGCATGCTCAAGCATTGATTCAAGTGGGAATGACTTCAAAGCATTGGCATATAAATTCATGCCAAGAGGAGACTTGCATAAATTACTGTACTCAAATCCAAATGATGAAAGATCTTCAGGTATATGCTATATTTCACTGGCCCAAAGGTTAAGTATTGCGGTTGACTTGTCTGATGCATTGGCATACCTACACCACAGTCATCAAGGAACAATTATTCATTGTGATCTCAAACCTAGCAATATTCTTTTGGATGACAATATGATAGCTCATGTTGGAGACTTTGGACTAGCAAGGTTCAGAATTGATTCCAAAACATCTTTCGGTAACTCAAATTCTACAATAAATGGCACCATAGGATATGTTGCTCCAGAATGTGCCATAGGTGGTCAAGTTTCAACTGCTGCAGACGTATACAGCTTCGGGGTTGTTCTCCTTGAGATTTTCATAAGGAGGAGGCCAACAGACGACATGTTCAAGGATGGATTGACCATTGCAAAGTATACAGAGATAAACATCCCTGATAAGATGCTGCAGATTGTTGATCCTCAGCTAGTACAAGAGTTGGGCCTGTCCCAAGAAGATCCAGTGCGTGTCGATGAAACTGCAACACATTGCCTTCTTTCTGTACTGAACATTGGACTGTGCTGCACCAAGTCATCCCCGAGTGAGCGCATCAGCATGCAGGAGGGGAAGAAAAGGACAAATTCAATACCTTTGCCTTCGTTTGATACTGAATTTCCCAAAGTTTCCTATAGTGATCTTGCTAGAGCAACTAACAGATTCTCGATAGCCAATTTAATTGGCAAAGGGAGATATAGTTCTGTATACCAAAGACAACTATTTCAAGACTTAAATGTAGTTGCTATCAAGGTCTTCAGTCTAGAGACAAGGGGAGCACAAAAGAGCTTCATTGCAGAGTGTAGTACTTTGAGAAATGTGTGGCATCGCAATTTAGTTCCTATCTTAACAGCGTGTTCAAGCATCGATTCTAGTGGAAATGACTTCAAAGCACTCGTGTATCAATTCATGCCACGAGGGGACTTGCATAAATTGCTGTACTCAACCAGGGATGATGGGGATGCTTCAAATCTGAACCACACTACATTGGCTCAAAGGATAAATATTGTTGTGGATGTATCAGATGCATTGGAGTATCTGCACCATAACAACCAAGGTACTATTATTCATTGTGATCTGAAGCCAAGCAACATCCTTCTAGGTGACAATATGATTGCTCACGTCGGAGATTTTGGCCTTGCAAGATTCAGAATTCATTCGTCAACATCTCTGGGTGATTCAAACTCAATTTCTTCCTTTGCAATAAAGGGAACCATTGGATACATTGCTCCACGTAATGAATGCTCAGAGGGCGGTCAAGTTTCAACTGCCTCAGATGTATTCAGCTTTGGAGTTGTTCTTTTGGAATTATTTATTCGGAGAAGGCCAACAGACGACATGTTTAAGGATGGATTGAGCATTGCAAAGCATGTAGAGGTGAACTTCCCTGACAGGATACTAGAGATTGTTGATCCCCAGCTGCAACAAGAGTTGGACCTTTGCCAAGAAACTCCAATGGCGGTAAAGGAGAAAGGTGTACACTGCCTGCGCAGTGTGCTAAATATTGGACTCTGCTGCACCAAGCCAACACCGAGTGAACGCATCAGCATCCAGGAGGCGTCTGCCAAGCTGCACGGAATTAAACATGCATATCTTAGAGAAAACTAA
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| Protein seq | MKVTTASGHLLLVLFASIFHPAVSSISGNGTDRLALLEFKNAITHDPQKSLMSWNDSNHLCSWEGVSCSSKNPPRVTSIDLSNQNLAGNISPSLGNLTFLKHLSLATNEFTGRIPESLGHLRRLRSLYLSNNTLQGIIPSFANCSDLRVLWLDHNELTGGLPDGLPLGLEELQVSSNTLVGTIPPSLGNVTTLRMLRFAFNGIEGGIPGELAALREMEILTIGGNRLSGGFPEPIMNMSVLIRLSLETNRFSGKMPSGIGTSLPNLWRLFIGGNFFQGNLPSSLANASNLVDLDISQNNFVGVVPAFIGKLANLTWLNLEMNQLHARSKQDWDFMDSLTNCTQLQALSMAGNQLEGHLPNSVGNFSVQLQRLYLGQNQLSGSFPSGIENLPNLIVFGLDYNRFTGSVPPWLGGLITLQVLSLTNNNFTGYIPSSLSNLSHLVELYLQSNQLLGNIPSSFGKLQFLTRIDISDNSLNGSLPKEIFRIPTIAEVGFSFNNLSGELPTEVGYAKQLRSLHLSSNNLSGDIPNTLGNCENLQEVVLDQNNFGGSIPASLGKLISLKSLNLSHNILNGSIPVSLGDLELLEQIDLSFNHLSGQVPTKGIFKNSTATHMDGNLGLCGGAPELHLPECPIVPSNKSKHKLYVTLKVVIPLASTVTLAIVILVIFIWKGKRREKSISLSSSGREFPKVSYRDLARATNGFSTSNLIGRGRYSSVYQGQLFHDINAVAIKVFSLETRGAQKSFIAECNALRNVRHRNLVPILTACSSIDSSGNDFKALAYKFMPRGDLHKLLYSNPNDERSSGICYISLAQRLSIAVDLSDALAYLHHSHQGTIIHCDLKPSNILLDDNMIAHVGDFGLARFRIDSKTSFGNSNSTINGTIGYVAPECAIGGQVSTAADVYSFGVVLLEIFIRRRPTDDMFKDGLTIAKYTEINIPDKMLQIVDPQLVQELGLSQEDPVRVDETATHCLLSVLNIGLCCTKSSPSERISMQEGKKRTNSIPLPSFDTEFPKVSYSDLARATNRFSIANLIGKGRYSSVYQRQLFQDLNVVAIKVFSLETRGAQKSFIAECSTLRNVWHRNLVPILTACSSIDSSGNDFKALVYQFMPRGDLHKLLYSTRDDGDASNLNHTTLAQRINIVVDVSDALEYLHHNNQGTIIHCDLKPSNILLGDNMIAHVGDFGLARFRIHSSTSLGDSNSISSFAIKGTIGYIAPRNECSEGGQVSTASDVFSFGVVLLELFIRRRPTDDMFKDGLSIAKHVEVNFPDRILEIVDPQLQQELDLCQETPMAVKEKGVHCLRSVLNIGLCCTKPTPSERISIQEASAKLHGIKHAYLREN
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0172400 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g07130 | RBH | 0.0 | 0.000000 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0173432 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0004940 | SBH | 0.027774 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0004930 | SBH | 0.145897 | 1.520357 | 0.670409 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0004950 | RBH | 0.351912 | 0.244407 | 1.702016 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0004830 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0004670 | RBH | 1.364498 | 1.938285 | 3.784618 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0061200 | RBH | 0.3629345 | 0.024787 | 0.005779 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0004800 | RBH | 0.000000 | 0.023156 | 0.053376 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0061900 | RBH | 4.7170635 | 2.200798 | 1.7117715 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0004750 | RBH | 0.011960 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0004870 | SBH | 0.120554 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0004870 | SBH | 2.079502 | 1.579314 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0004850 | RBH | 1.547643 | 0.0 | 0.488434 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0004840 | RBH | 0.034522 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G004840 | SBH | 0.012716 | 0.072135 | 0.295710 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0004810 | SBH | 4.826402 | 0.871399 | 1.661659 |
