Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_02g0008780 | OGI:02001240 | 16/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr02:6471196-6472194 | ||||||||
| Gene Symbol | LRK2, OsLRK2, OsPSKR8, PSKR8, RLCK65, OsRLCK65 | ||||||||||
| DNA seq | atggcgaggcgtgacgtgcggcacccagggacgcagccgtggCcgtgtggtgggctggtggcgctggaCctcagcaaccttgatctttctggcaccattgatccttccataagcaacctcacctacctgagaaagcttgatcttcctgtgaatcatctaactggtaacatcccttcagagcttggTcgtcttctcgacctccagcatgtcaacctgagctataattctctgcaaggtgacattccggcatcactgtcactatgccagcagcttgagaacatcagtctggcattcaaccacctctcaggaggaatgcctccagccatgggtgatctgtccaaactccgcatagtccagtggcagaacaacatgcttgatgggaagatgcctcgtacgataggctcattgggcagcttagaggtccttAacctctacaacaacagccTtgcaggaagcatcccgtcagagattggaaacctcaccagtctagtaagtcttatcctgagctacaatcacttgaCaggttcagttccttcttctcttggtaaccttcagaggatcaagaatttgcaactgagggggaaccaactttcagggccagttccaacgttcttggggaacctatcttcactaaccattcttaatcttggtactaacaGatttcagggggagattgtgccattgcaaggactgacatctctgactgccctaattttacaagaaaacaaccttcatggtggcatcccttcttggttaggaaacctctcttccctagtgtacctaagcttgggagggaacagattaactggaggtattcctgaatcattagcaaaacttgagaagttatctggatttgttcttgctgaaaacaatcttacaggtagcattcctccatccctaggaaatcttcactctcttacagatttctatatagataagaatcagctcatgggtacattccttcttccatttccaatctgtcctcttcagaatatttaa
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| CDS seq | atggcgaggcgtgacgtgcggcacccagggacgcagccgtggCcgtgtggtgggctggtggcgctggaCctcagcaaccttgatctttctggcaccattgatccttccataagcaacctcacctacctgagaaagcttgatcttcctgtgaatcatctaactggtaacatcccttcagagcttggTcgtcttctcgacctccagcatgtcaacctgagctataattctctgcaaggtgacattccggcatcactgtcactatgccagcagcttgagaacatcagtctggcattcaaccacctctcaggaggaatgcctccagccatgggtgatctgtccaaactccgcatagtccagtggcagaacaacatgcttgatgggaagatgcctcgtacgataggctcattgggcagcttagaggtccttAacctctacaacaacagccTtgcaggaagcatcccgtcagagattggaaacctcaccagtctagtaagtcttatcctgagctacaatcacttgaCaggttcagttccttcttctcttggtaaccttcagaggatcaagaatttgcaactgagggggaaccaactttcagggccagttccaacgttcttggggaacctatcttcactaaccattcttaatcttggtactaacaGatttcagggggagattgtgccattgcaaggactgacatctctgactgccctaattttacaagaaaacaaccttcatggtggcatcccttcttggttaggaaacctctcttccctagtgtacctaagcttgggagggaacagattaactggaggtattcctgaatcattagcaaaacttgagaagttatctggatttgttcttgctgaaaacaatcttacaggtagcattcctccatccctaggaaatcttcactctcttacagatttctatatagataagaatcagctcatgggtacattccttcttccatttccaatctgtcctcttcagaatatttaa
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| Protein seq | MARRDVRHPGTQPWPCGGLVALDLSNLDLSGTIDPSISNLTYLRKLDLPVNHLTGNIPSELGRLLDLQHVNLSYNSLQGDIPASLSLCQQLENISLAFNHLSGGMPPAMGDLSKLRIVQWQNNMLDGKMPRTIGSLGSLEVLNLYNNSLAGSIPSEIGNLTSLVSLILSYNHLTGSVPSSLGNLQRIKNLQLRGNQLSGPVPTFLGNLSSLTILNLGTNRFQGEIVPLQGLTSLTALILQENNLHGGIPSWLGNLSSLVYLSLGGNRLTGGIPESLAKLEKLSGFVLAENNLTGSIPPSLGNLHSLTDFYIDKNQLMGTFLLPFPICPLQNI |
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| Function | LRR receptor-like serine/threonine-protein kinase ERECTA [UniProtKB/Swiss-Prot:Q42371] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_02g0008780 | OsNaBo_02g0008780.01 | Chr02 | 6471196 | 6472194 | + | NAM | ||
| CDS seq | atggcgaggcgtgacgtgcggcacccagggacgcagccgtggCcgtgtggtgggctggtggcgctggaCctcagcaaccttgatctttctggcaccattgatccttccataagcaacctcacctacctgagaaagcttgatcttcctgtgaatcatctaactggtaacatcccttcagagcttggTcgtcttctcgacctccagcatgtcaacctgagctataattctctgcaaggtgacattccggcatcactgtcactatgccagcagcttgagaacatcagtctggcattcaaccacctctcaggaggaatgcctccagccatgggtgatctgtccaaactccgcatagtccagtggcagaacaacatgcttgatgggaagatgcctcgtacgataggctcattgggcagcttagaggtccttAacctctacaacaacagccTtgcaggaagcatcccgtcagagattggaaacctcaccagtctagtaagtcttatcctgagctacaatcacttgaCaggttcagttccttcttctcttggtaaccttcagaggatcaagaatttgcaactgagggggaaccaactttcagggccagttccaacgttcttggggaacctatcttcactaaccattcttaatcttggtactaacaGatttcagggggagattgtgccattgcaaggactgacatctctgactgccctaattttacaagaaaacaaccttcatggtggcatcccttcttggttaggaaacctctcttccctagtgtacctaagcttgggagggaacagattaactggaggtattcctgaatcattagcaaaacttgagaagttatctggatttgttcttgctgaaaacaatcttacaggtagcattcctccatccctaggaaatcttcactctcttacagatttctatatagataagaatcagctcatgggtacattccttcttccatttccaatctgtcctcttcagaatatttaa
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| Protein seq | MARRDVRHPGTQPWPCGGLVALDLSNLDLSGTIDPSISNLTYLRKLDLPVNHLTGNIPSELGRLLDLQHVNLSYNSLQGDIPASLSLCQQLENISLAFNHLSGGMPPAMGDLSKLRIVQWQNNMLDGKMPRTIGSLGSLEVLNLYNNSLAGSIPSEIGNLTSLVSLILSYNHLTGSVPSSLGNLQRIKNLQLRGNQLSGPVPTFLGNLSSLTILNLGTNRFQGEIVPLQGLTSLTALILQENNLHGGIPSWLGNLSSLVYLSLGGNRLTGGIPESLAKLEKLSGFVLAENNLTGSIPPSLGNLHSLTDFYIDKNQLMGTFLLPFPICPLQNI
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.650414 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0216000 | RBH | 0.0 | 0.0 | 0.000000 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g12450 | RBH | 0.0 | 0.0 | 0.146571 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0216000 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0004120 | RBH | 0.124114 | 14.442955 | 1.259517 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0004260 | RBH | 0.069201 | 0.845967 | 0.776244 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0008430 | RBH | 0.369193 | 0.439994 | 0.324075 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0004250 | RBH | 0.061636 | 0.022630 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0008760 | RBH | 0.130144 | 0.000000 | 1.292085 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0109100 | RBH | 0.768431 | 2.869523 | 3.2847305 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0004280 | SBH | 0.048594 | 0.017924 | 0.096358 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0112800 | RBH | 0.0483265 | 0.2035705 | 2.049059 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0009010 | RBH | 0.000000 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0004210 | RBH | 0.000000 | 0.847441 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0008990 | RBH | 0.0 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0008970 | SBH | 0.120356 | 0.097424 | 0.112737 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0008740 | SBH | 0.0 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G024900 | RBH | 0.199466 | 0.184480 | 0.440630 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0024890 | SBH | 0.206270 | 0.000000 | 0.311611 |
