Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsCMeo_02g0018540 | OGI:02050340 | 3/16 | CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | Chr02:18427336-18430718 | ||||||||
| Gene Symbol | MAK3 | ||||||||||
| DNA seq | atggccctcgtcgtcgcagtctacgtgctcacagctctcgcggcagccacggcggcggcaccttcgccgtcctcgggcgacgacagcgatgccacggcgctgctcgcgttcaaggcggggctctccgacccgctcggggtgcttcgcctgaactggaccagcggcacgccctcgtgccactgggccggcgtgtcctgcggcaagcgcggccacggtcgcgtcaccgcccttgcgctgcccaacgtgccgctccatggcgggctctccccgagcctcggtaacctgtctttcctctctatcctcaacctcaccaacgctagcctcaccggggaaataccaccggagctcggccggctcagtcgtctccagtacctcaacctcaacagaaatagcttgtcgggtactattcctggtgctatgggcaacctcacgagcctccagcaacttgacctgtaccataaccatctgtcaggtcagatccctcgggagctgcaaaatttgggtaccctaagatacatccgtcttgacaccaactacttaagcgggccaataccggacagcgttttcaacaacacaccattgctgagcgtactcaacctcggcaacaatagcctctcggggaaaataccagacagcatagcatctctgtccggtctcacgctactcgttcttcaagacaacagcttatctggtcctctgccacctggcatcttcaacatgtctgagctccaggtcatcgcccttgcaaagacccaaaatctcactggcactatccctgacaatacaagcttccatctgcccatgctgcaagtattttccctctctaggaacgaattccagggaaggatcccttcgggccttgccgcgtgccggtttcttcgggtactttccttgtcctacaatttgttcgaggatgtcatccccgcatggttgactcgattgccacaacttacccttatttccttgggtggaaatagcattgcagggacaatcccgcctgcattgagcaatctcactcaacttagtcaattggaccttgttgactcccagctaacgggagagatcccggtagaattaggacagttggcacaactgacatggttgaatcttgcagcgaaccaactaactggttctattccaccatctcttgggaacctatccttggtcttacagttggatttggctcaaaaccgtttgaatggcaccataccaataacatttggtaaccttggaatgcttcgttatctcaatgtcgaagcgaacaatcttgaaggagatcttcatttccttgcttcactttccaactgtaggagactcgaatatgtagacatagcgatgaactcttacacaggcaggatccctgacagtgtggggaacttgtcgagcaaattggattcttttgtggcgcatagcaaccaaatcacaggtggcttgccacctaccatggcaaatttaagcaacctcatcgcgatatatctctacgcaaaccaactaactgaaacgatccccacacacatgatgcaaatgaagaatctccaaatgctcaacctccatgataacctcatgacaggatctatcccaacagaagttggcatgctaagcagtttggtagagttgtacttaggtggtaacaaatttgttgcatccatccctggtggaataggcaatctcagcaatctccggagcttatctctaccccgaaacaacctatcttcttccatccctataagcttgtacagcttgacttgtctcataactccataagtggagcattggcaactgatattgggagcatgcaagcaattgtccaaattgatctttcaacgaaccaaatatcaggaagcattcctacctcactaggacaacttgagatgctgacatccttgaatctttctcataacctattgcaagacaaaataccatatacaattggtaagttaactagcttagtgacgttagatttgtctgacaattctcttgtgggaaccattccagagtctttagccaatgtcacttacctcactagcctgaacctttctttcaacaagctagaaggtcagataccggaaagaggtgtcttctcaaacatcactcttgaatccttggtaggaaacagagctctttgtggtttgccacgcctaggattttcagcatgtgcaagcaattctcgttctggcaaactacaaatcctgaaatatgttcttcccagcattgtaacattcattattgttgcttctgttttcttgtatctaatgctcaaaggaaaatttaagacaagaaaagagttacctgccccttcaagtgttatcggtggaattaataaccacatattggtttcctaccatgaaattgttcgtgctactcacaacttcagtgaaggcaatctacttggtatcgggaactttggaaaggttttcaagggccagctaagcaacggtttgattgttgcaataaaagttcttaaagtgcaatcagagagagccaccagaagcttcgatgtcgagtgcgatgcattgcgcatggcgcgacacagaaacttggtgaagatacttagcacctgctccaatctggacttcagagcactggtccttcaatacatgccaaatggtagcttggagatgcttctacattcggaaggtaggtcattcttaggattccgggagaggttaaacataatgctagatgtgtcaatggcattggaatatctacaccatcgtcatgttgatgttgtcttgcattgcgacttgaaaccaagcaatgtgttgctcgatgaggagctcactgctcatctcgcggattttggcatcgcaaaattgttgctaggagatgacacctccgttatctctgctagtatgcccgggacaatcggctacatggctccaggtataaataagcatatctcttcttgcagcagtcatttgattcttcatgaactaatttatatttctcataatatttatcttttatttgttaaagagtacggattgataggaaaagcatcacggatgagcgatgtgttcagctatggtatcttgttacttgaagttttaactgcgaaaaggcctacagatcccatgtttgatggagagctaagcctcaggcaatgggtttttgatgcatttccggctcggcttgttgatgttgttgaccacaagctgctacaagatgagaaaacaaatgggatcggcgacattggaacagccttggacgtctcctcgaacatgttggacagatgcattgtgtcaatagttgagctgggattgctatgctccagtgacttgcctgaaaaaagagtatcaattattgaggtggtcaagaagttgcacaaggtcaagacggattatgaatccaacctaacagttcagggcactcagcaaacttag
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| CDS seq | atggccctcgtcgtcgcagtctacgtgctcacagctctcgcggcagccacggcggcggcaccttcgccgtcctcgggcgacgacagcgatgccacggcgctgctcgcgttcaaggcggggctctccgacccgctcggggtgcttcgcctgaactggaccagcggcacgccctcgtgccactgggccggcgtgtcctgcggcaagcgcggccacggtcgcgtcaccgcccttgcgctgcccaacgtgccgctccatggcgggctctccccgagcctcggtaacctgtctttcctctctatcctcaacctcaccaacgctagcctcaccggggaaataccaccggagctcggccggctcagtcgtctccagtacctcaacctcaacagaaatagcttgtcgggtactattcctggtgctatgggcaacctcacgagcctccagcaacttgacctgtaccataaccatctgtcaggtcagatccctcgggagctgcaaaatttgggtaccctaagatacatccgtcttgacaccaactacttaagcgggccaataccggacagcgttttcaacaacacaccattgctgagcgtactcaacctcggcaacaatagcctctcggggaaaataccagacagcatagcatctctgtccggtctcacgctactcgttcttcaagacaacagcttatctggtcctctgccacctggcatcttcaacatgtctgagctccaggtcatcgcccttgcaaagacccaaaatctcactggcactatccctgacaatacaagcttccatctgcccatgctgcaagtattttccctctctaggaacgaattccagggaaggatcccttcgggccttgccgcgtgccggtttcttcgggtactttccttgtcctacaatttgttcgaggatgtcatccccgcatggttgactcgattgccacaacttacccttatttccttgggtggaaatagcattgcagggacaatcccgcctgcattgagcaatctcactcaacttagtcaattggaccttgttgactcccagctaacgggagagatcccggtagaattaggacagttggcacaactgacatggttgaatcttgcagcgaaccaactaactggttctattccaccatctcttgggaacctatccttggtcttacagttggatttggctcaaaaccgtttgaatggcaccataccaataacatttggtaaccttggaatgcttcgttatctcaatgtcgaagcgaacaatcttgaaggagatcttcatttccttgcttcactttccaactgtaggagactcgaatatgtagacatagcgatgaactcttacacaggcaggatccctgacagtgtggggaacttgtcgagcaaattggattcttttgtggcgcatagcaaccaaatcacaggtggcttgccacctaccatggcaaatttaagcaacctcatcgcgatatatctctacgcaaaccaactaactgaaacgatccccacacacatgatgcaaatgaagaatctccaaatgctcaacctccatgataacctcatgacaggatctatcccaacagaagttggcatgctaagcagtttggtagagttgtacttaggtgagtctttagccaatgtcacttacctcactagcctgaacctttctttcaacaagctagaaggtcagataccggaaagaggtgtcttctcaaacatcactcttgaatccttggtaggaaacagagctctttgtggtttgccacgcctaggattttcagcatgtgcaagcaattctcgttctggcaaactacaaatcctgaaatatgttcttcccagcattgtaacattcattattgttgcttctgttttcttgtatctaatgctcaaaggaaaatttaagacaagaaaagagttacctgccccttcaagtgttatcggtggaattaataaccacatattggtttcctaccatgaaattgttcgtgctactcacaacttcagtgaaggcaatctacttggtatcgggaactttggaaaggttttcaagggccagctaagcaacggtttgattgttgcaataaaagttcttaaagtgcaatcagagagagccaccagaagcttcgatgtcgagtgcgatgcattgcgcatggcgcgacacagaaacttggtgaagatacttagcacctgctccaatctggacttcagagcactggtccttcaatacatgccaaatggtagcttggagatgcttctacattcggaaggtaggtcattcttaggattccgggagaggttaaacataatgctagatgtgtcaatggcattggaatatctacaccatcgtcatgttgatgttgtcttgcattgcgacttgaaaccaagcaatgtgttgctcgatgaggagctcactgctcatctcgcggattttggcatcgcaaaattgttgctaggagatgacacctccgttatctctgctagtatgcccgggacaatcggctacatggctccagagtacggattgataggaaaagcatcacggatgagcgatgtgttcagctatggtatcttgttacttgaagttttaactgcgaaaaggcctacagatcccatgtttgatggagagctaagcctcaggcaatgggtttttgatgcatttccggctcggcttgttgatgttgttgaccacaagctgctacaagatgagaaaacaaatgggatcggcgacattggaacagccttggacgtctcctcgaacatgttggacagatgcattgtgtcaatagttgagctgggattgctatgctccagtgacttgcctgaaaaaagagtatcaattattgaggtggtcaagaagttgcacaaggtcaagacggattatgaatccaacctaacagttcagggcactcagcaaacttag
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| Protein seq | MALVVAVYVLTALAAATAAAPSPSSGDDSDATALLAFKAGLSDPLGVLRLNWTSGTPSCHWAGVSCGKRGHGRVTALALPNVPLHGGLSPSLGNLSFLSILNLTNASLTGEIPPELGRLSRLQYLNLNRNSLSGTIPGAMGNLTSLQQLDLYHNHLSGQIPRELQNLGTLRYIRLDTNYLSGPIPDSVFNNTPLLSVLNLGNNSLSGKIPDSIASLSGLTLLVLQDNSLSGPLPPGIFNMSELQVIALAKTQNLTGTIPDNTSFHLPMLQVFSLSRNEFQGRIPSGLAACRFLRVLSLSYNLFEDVIPAWLTRLPQLTLISLGGNSIAGTIPPALSNLTQLSQLDLVDSQLTGEIPVELGQLAQLTWLNLAANQLTGSIPPSLGNLSLVLQLDLAQNRLNGTIPITFGNLGMLRYLNVEANNLEGDLHFLASLSNCRRLEYVDIAMNSYTGRIPDSVGNLSSKLDSFVAHSNQITGGLPPTMANLSNLIAIYLYANQLTETIPTHMMQMKNLQMLNLHDNLMTGSIPTEVGMLSSLVELYLGESLANVTYLTSLNLSFNKLEGQIPERGVFSNITLESLVGNRALCGLPRLGFSACASNSRSGKLQILKYVLPSIVTFIIVASVFLYLMLKGKFKTRKELPAPSSVIGGINNHILVSYHEIVRATHNFSEGNLLGIGNFGKVFKGQLSNGLIVAIKVLKVQSERATRSFDVECDALRMARHRNLVKILSTCSNLDFRALVLQYMPNGSLEMLLHSEGRSFLGFRERLNIMLDVSMALEYLHHRHVDVVLHCDLKPSNVLLDEELTAHLADFGIAKLLLGDDTSVISASMPGTIGYMAPEYGLIGKASRMSDVFSYGILLLEVLTAKRPTDPMFDGELSLRQWVFDAFPARLVDVVDHKLLQDEKTNGIGDIGTALDVSSNMLDRCIVSIVELGLLCSSDLPEKRVSIIEVVKKLHKVKTDYESNLTVQGTQQT |
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| Function | Probable LRR receptor-like serine/threonine-protein kinase At3g47570 [UniProtKB/Swiss-Prot:C0LGP4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_02g0018540 | OsCMeo_02g0018540.01 | Chr02 | 18427336 | 18430718 | + | NAM | ||
| CDS seq | atggccctcgtcgtcgcagtctacgtgctcacagctctcgcggcagccacggcggcggcaccttcgccgtcctcgggcgacgacagcgatgccacggcgctgctcgcgttcaaggcggggctctccgacccgctcggggtgcttcgcctgaactggaccagcggcacgccctcgtgccactgggccggcgtgtcctgcggcaagcgcggccacggtcgcgtcaccgcccttgcgctgcccaacgtgccgctccatggcgggctctccccgagcctcggtaacctgtctttcctctctatcctcaacctcaccaacgctagcctcaccggggaaataccaccggagctcggccggctcagtcgtctccagtacctcaacctcaacagaaatagcttgtcgggtactattcctggtgctatgggcaacctcacgagcctccagcaacttgacctgtaccataaccatctgtcaggtcagatccctcgggagctgcaaaatttgggtaccctaagatacatccgtcttgacaccaactacttaagcgggccaataccggacagcgttttcaacaacacaccattgctgagcgtactcaacctcggcaacaatagcctctcggggaaaataccagacagcatagcatctctgtccggtctcacgctactcgttcttcaagacaacagcttatctggtcctctgccacctggcatcttcaacatgtctgagctccaggtcatcgcccttgcaaagacccaaaatctcactggcactatccctgacaatacaagcttccatctgcccatgctgcaagtattttccctctctaggaacgaattccagggaaggatcccttcgggccttgccgcgtgccggtttcttcgggtactttccttgtcctacaatttgttcgaggatgtcatccccgcatggttgactcgattgccacaacttacccttatttccttgggtggaaatagcattgcagggacaatcccgcctgcattgagcaatctcactcaacttagtcaattggaccttgttgactcccagctaacgggagagatcccggtagaattaggacagttggcacaactgacatggttgaatcttgcagcgaaccaactaactggttctattccaccatctcttgggaacctatccttggtcttacagttggatttggctcaaaaccgtttgaatggcaccataccaataacatttggtaaccttggaatgcttcgttatctcaatgtcgaagcgaacaatcttgaaggagatcttcatttccttgcttcactttccaactgtaggagactcgaatatgtagacatagcgatgaactcttacacaggcaggatccctgacagtgtggggaacttgtcgagcaaattggattcttttgtggcgcatagcaaccaaatcacaggtggcttgccacctaccatggcaaatttaagcaacctcatcgcgatatatctctacgcaaaccaactaactgaaacgatccccacacacatgatgcaaatgaagaatctccaaatgctcaacctccatgataacctcatgacaggatctatcccaacagaagttggcatgctaagcagtttggtagagttgtacttaggtgagtctttagccaatgtcacttacctcactagcctgaacctttctttcaacaagctagaaggtcagataccggaaagaggtgtcttctcaaacatcactcttgaatccttggtaggaaacagagctctttgtggtttgccacgcctaggattttcagcatgtgcaagcaattctcgttctggcaaactacaaatcctgaaatatgttcttcccagcattgtaacattcattattgttgcttctgttttcttgtatctaatgctcaaaggaaaatttaagacaagaaaagagttacctgccccttcaagtgttatcggtggaattaataaccacatattggtttcctaccatgaaattgttcgtgctactcacaacttcagtgaaggcaatctacttggtatcgggaactttggaaaggttttcaagggccagctaagcaacggtttgattgttgcaataaaagttcttaaagtgcaatcagagagagccaccagaagcttcgatgtcgagtgcgatgcattgcgcatggcgcgacacagaaacttggtgaagatacttagcacctgctccaatctggacttcagagcactggtccttcaatacatgccaaatggtagcttggagatgcttctacattcggaaggtaggtcattcttaggattccgggagaggttaaacataatgctagatgtgtcaatggcattggaatatctacaccatcgtcatgttgatgttgtcttgcattgcgacttgaaaccaagcaatgtgttgctcgatgaggagctcactgctcatctcgcggattttggcatcgcaaaattgttgctaggagatgacacctccgttatctctgctagtatgcccgggacaatcggctacatggctccagagtacggattgataggaaaagcatcacggatgagcgatgtgttcagctatggtatcttgttacttgaagttttaactgcgaaaaggcctacagatcccatgtttgatggagagctaagcctcaggcaatgggtttttgatgcatttccggctcggcttgttgatgttgttgaccacaagctgctacaagatgagaaaacaaatgggatcggcgacattggaacagccttggacgtctcctcgaacatgttggacagatgcattgtgtcaatagttgagctgggattgctatgctccagtgacttgcctgaaaaaagagtatcaattattgaggtggtcaagaagttgcacaaggtcaagacggattatgaatccaacctaacagttcagggcactcagcaaacttag
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| Protein seq | MALVVAVYVLTALAAATAAAPSPSSGDDSDATALLAFKAGLSDPLGVLRLNWTSGTPSCHWAGVSCGKRGHGRVTALALPNVPLHGGLSPSLGNLSFLSILNLTNASLTGEIPPELGRLSRLQYLNLNRNSLSGTIPGAMGNLTSLQQLDLYHNHLSGQIPRELQNLGTLRYIRLDTNYLSGPIPDSVFNNTPLLSVLNLGNNSLSGKIPDSIASLSGLTLLVLQDNSLSGPLPPGIFNMSELQVIALAKTQNLTGTIPDNTSFHLPMLQVFSLSRNEFQGRIPSGLAACRFLRVLSLSYNLFEDVIPAWLTRLPQLTLISLGGNSIAGTIPPALSNLTQLSQLDLVDSQLTGEIPVELGQLAQLTWLNLAANQLTGSIPPSLGNLSLVLQLDLAQNRLNGTIPITFGNLGMLRYLNVEANNLEGDLHFLASLSNCRRLEYVDIAMNSYTGRIPDSVGNLSSKLDSFVAHSNQITGGLPPTMANLSNLIAIYLYANQLTETIPTHMMQMKNLQMLNLHDNLMTGSIPTEVGMLSSLVELYLGESLANVTYLTSLNLSFNKLEGQIPERGVFSNITLESLVGNRALCGLPRLGFSACASNSRSGKLQILKYVLPSIVTFIIVASVFLYLMLKGKFKTRKELPAPSSVIGGINNHILVSYHEIVRATHNFSEGNLLGIGNFGKVFKGQLSNGLIVAIKVLKVQSERATRSFDVECDALRMARHRNLVKILSTCSNLDFRALVLQYMPNGSLEMLLHSEGRSFLGFRERLNIMLDVSMALEYLHHRHVDVVLHCDLKPSNVLLDEELTAHLADFGIAKLLLGDDTSVISASMPGTIGYMAPEYGLIGKASRMSDVFSYGILLLEVLTAKRPTDPMFDGELSLRQWVFDAFPARLVDVVDHKLLQDEKTNGIGDIGTALDVSSNMLDRCIVSIVELGLLCSSDLPEKRVSIIEVVKKLHKVKTDYESNLTVQGTQQT
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0215900 | SBH | 0.0 | 0.247162 | 0.883589 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g30540 | RBH | 0.210657 | 0.096048 | 0.048997 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0215900 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0024890 | SBH | 0.266269 | 0.551824 | 0.649657 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0025040 | SBH | 0.095130 | 0.000000 | 0.117828 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0018300 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0008480 | SBH | 0.0 | 0.0 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0268700 | SBH | 0.515079 | 0.260926 | 0.078959 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0008320 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0440500 | SBH | 0.005107 | 0.2015625 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0008750 | SBH | 0.030803 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0003980 | SBH | 0.070042 | 4.234505 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0004260 | SBH | 3.191976 | 29.049385 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0024690 | SBH | 0.035031 | 0.082412 | 0.021348 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0008460 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G004060 | SBH | 0.292437 | 2.052631 | 0.572981 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0004010 | SBH | 0.630622 | 3.130005 | 0.941510 |
