Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| Os02g0215900 | OGI:02019120 | 15/16 | Nipponbare | IRGSP 1.0 | RAP-db | Chr02:6488457-6490577 | ||||||||
| Gene Symbol | OsGIRL1, OsGIRL1-1, OsGIRL1-2, OsGIRL1-3, TMS10, OsSERK4, OsSERL9, OsSERK2, OsBAK1-5, OsTMS10, SERK4, SERL9, SERK2, BAK1-5, OsBAK1, BAK1, RLCK74, OsRLCK74, LP2, OsLP2 | ||||||||||
| DNA seq | CTATTCACATGCTTTGCGCTACGTCTAAGGACTAAGCTTAGAAGAGCAAACCCAAAGATACCGCTCTCCGATAAGCAACATATGAGAGTTTCTTATGCTCAGTTGTCCAAAGCAACAAATAGTTTTGCATCTGAGAACCTCATTGGAGTGGGCAGCTTTGGTGCAGTGTACCAAGGAAGAATTGGGATCTCTGACCAACAATTGGTGGTTGCAGTGAAGGTGCTCAACTTGCAACAAGCTGGTGCGTATCGAAGTTTTGATGCAGAATGTGAGGCTTTGAGATGTATTCGCCATCGGAATCTTGTAAAGATTCTTACAGTTTGCTCAGGTATTGATTTCCAAGGTAGTGACTTCAAGGCGCTTGTATTTGAGTTCCTGCCAAATGGAAATTTAGACCAGTGGCTACACAAGCATCTTGAGGAAGAAGGTGAACCTAAGGTGCTAAATCTCGTTGAAAGACTCCAAATTGCGATAGATGTGGCTTCTGCACTTGAATACTTACATCAGCACAAGCCATGTCCAATTGTTCACTGTGATCTGAAGCCAAGCAATATTCTTCTTGACAATGACATGGTTGCTCATGTTGGTGATTTTGGGCTTGCAAGGTTCCTTCATCAAGAACACAGCAATAGTTCAGATAAATCAACTGGTTGGAATGCAATAAGAGGAACAATTGGCTATGTTGCCCCAGGTGTGCACAATTCTATCATCATCTTGTTGCATTTGTTTCTTTACTTCATTCCACCTAAATAAGCTTACTAAGTTCTTTATGTTTGTTTATTCCAGAGTATGGATTGGGCAATGAAGTCTCAATCCATGGAGACGTCTACAGCTATGGCATACTTTTGCTGGAGATGTTCACTGGAAAAAGGCCAACAAACAGTGAATTCGGCGATGTTCTTACTCTTCATGAGTATGTAGAAACAGCGCTGCCAGACCAAACAACTAGTGTCATTGACCAAAGCCTACTAGATGCGACATGGAATAGCGAAGGAACAGCTCAAAAGTACCACGACATCGAAGAGATAAGAACTGAGTGCATTGTTTCAATTCTGAAGGTCGGAATATTGTGCTCAAAAGAGATACCAACTGATCGGATGCAAATTGGGGATGCATTGAGAGAGTTGCAGGCAATTAGAGATAGGTTTGATACACATCAGCTATAGTAGCCTATATCTTGATGAAGTGGTGCAGCATATCAAAGTCATGCTTGTGCATGAAATATTCTACTTCGTACTATTTATCTGTTGAGGGTCATGCACTTATCAGTCAAGTAAGTCTGCAAGAAGACACTGGAGGCTGAACATGCTCTACTGAAGATTTTAGGAGTTGGAAGCTAAAAACGGATATCGAGTATCATGGAAGAAGCAAAACATCTTCAGCTAAGGAAAAGGAGGAAGTTAATTGAAATAAACTAGGGCAAAATGCTGTACTACATTATCAAGCAAAAATATTGTACTCGAGCAGCTACAGTCAGCTTATGGCCACACCTACACAACACTCTGTAATGGCTGAGAGGTATACTAAATAAGAGCCTATAGCAATTCGTATTGCAGGGCATCCAATTAGCTACTCATTTTCGCTCTTCGCACATATAATTCTTGACTGAGCAATTCATAAACATGTCAACATGGCAGTGCCTGACTTGGCTAATACTGTTGACAACTGTTGCAATAAGCAGCACAAGATAGCGACGTAAGAACCTCCATCTGTCATAGAAGTAGACATGAGAATTGTTAACACAACTTTTGTTCTGAATATTGGAATTTCTTGTTCAAATTCAACGAATCTCCCACAAAGTAAGAGATGCAACCAATAAGAAAAAGGTTTAACAGGGATTTGCTCCGAGAATGGAGCATCAACCCATGAAGCAGTACAAGGTATTTCCAGTGCAGGTCATCTTGAAACTATTGCACAACTCAAAAAAGGTCAATCTTGATCCAGGGGCTCTTGGCTAAGGCCCTGGATGTGGTCTATTCTACTGTAGACTGGCCCTCCCCTTAAGAGTTAGGTTTAGAATTTTGGATCGATTGATCACAGCCGAATTTGGAATGCAGGAATCTTGTCTTGTCCATGCAAAAGATTTGAGCATTTATATGCACTTTTAAGAAAAATCATCTG
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| CDS seq | ATGAGAGTTTCTTATGCTCAGTTGTCCAAAGCAACAAATAGTTTTGCATCTGAGAACCTCATTGGAGTGGGCAGCTTTGGTGCAGTGTACCAAGGAAGAATTGGGATCTCTGACCAACAATTGGTGGTTGCAGTGAAGGTGCTCAACTTGCAACAAGCTGGTGCGTATCGAAGTTTTGATGCAGAATGTGAGGCTTTGAGATGTATTCGCCATCGGAATCTTGTAAAGATTCTTACAGTTTGCTCAGGTATTGATTTCCAAGGTAGTGACTTCAAGGCGCTTGTATTTGAGTTCCTGCCAAATGGAAATTTAGACCAGTGGCTACACAAGCATCTTGAGGAAGAAGGTGAACCTAAGGTGCTAAATCTCGTTGAAAGACTCCAAATTGCGATAGATGTGGCTTCTGCACTTGAATACTTACATCAGCACAAGCCATGTCCAATTGTTCACTGTGATCTGAAGCCAAGCAATATTCTTCTTGACAATGACATGGTTGCTCATGTTGGTGATTTTGGGCTTGCAAGGTTCCTTCATCAAGAACACAGCAATAGTTCAGATAAATCAACTGGTTGGAATGCAATAAGAGGAACAATTGGCTATGTTGCCCCAGAGTATGGATTGGGCAATGAAGTCTCAATCCATGGAGACGTCTACAGCTATGGCATACTTTTGCTGGAGATGTTCACTGGAAAAAGGCCAACAAACAGTGAATTCGGCGATGTTCTTACTCTTCATGAGTATGTAGAAACAGCGCTGCCAGACCAAACAACTAGTGTCATTGACCAAAGCCTACTAGATGCGACATGGAATAGCGAAGGAACAGCTCAAAAGTACCACGACATCGAAGAGATAAGAACTGAGTGCATTGTTTCAATTCTGAAGGTCGGAATATTGTGCTCAAAAGAGATACCAACTGATCGGATGCAAATTGGGGATGCATTGAGAGAGTTGCAGGCAATTAGAGATAGGTTTGATACACATCAGCTATAG
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| Protein seq | MRVSYAQLSKATNSFASENLIGVGSFGAVYQGRIGISDQQLVVAVKVLNLQQAGAYRSFDAECEALRCIRHRNLVKILTVCSGIDFQGSDFKALVFEFLPNGNLDQWLHKHLEEEGEPKVLNLVERLQIAIDVASALEYLHQHKPCPIVHCDLKPSNILLDNDMVAHVGDFGLARFLHQEHSNSSDKSTGWNAIRGTIGYVAPEYGLGNEVSIHGDVYSYGILLLEMFTGKRPTNSEFGDVLTLHEYVETALPDQTTSVIDQSLLDATWNSEGTAQKYHDIEEIRTECIVSILKVGILCSKEIPTDRMQIGDALRELQAIRDRFDTHQL |
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| Function | Probable LRR receptor-like serine/threonine-protein kinase At3g47570 [UniProtKB/Swiss-Prot:C0LGP4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| Os02g0215900 | Os02t0215900-01 | Chr02 | 6488457 | 6490577 | + | irgsp1_rep | ||
| CDS seq | ATGAGAGTTTCTTATGCTCAGTTGTCCAAAGCAACAAATAGTTTTGCATCTGAGAACCTCATTGGAGTGGGCAGCTTTGGTGCAGTGTACCAAGGAAGAATTGGGATCTCTGACCAACAATTGGTGGTTGCAGTGAAGGTGCTCAACTTGCAACAAGCTGGTGCGTATCGAAGTTTTGATGCAGAATGTGAGGCTTTGAGATGTATTCGCCATCGGAATCTTGTAAAGATTCTTACAGTTTGCTCAGGTATTGATTTCCAAGGTAGTGACTTCAAGGCGCTTGTATTTGAGTTCCTGCCAAATGGAAATTTAGACCAGTGGCTACACAAGCATCTTGAGGAAGAAGGTGAACCTAAGGTGCTAAATCTCGTTGAAAGACTCCAAATTGCGATAGATGTGGCTTCTGCACTTGAATACTTACATCAGCACAAGCCATGTCCAATTGTTCACTGTGATCTGAAGCCAAGCAATATTCTTCTTGACAATGACATGGTTGCTCATGTTGGTGATTTTGGGCTTGCAAGGTTCCTTCATCAAGAACACAGCAATAGTTCAGATAAATCAACTGGTTGGAATGCAATAAGAGGAACAATTGGCTATGTTGCCCCAGAGTATGGATTGGGCAATGAAGTCTCAATCCATGGAGACGTCTACAGCTATGGCATACTTTTGCTGGAGATGTTCACTGGAAAAAGGCCAACAAACAGTGAATTCGGCGATGTTCTTACTCTTCATGAGTATGTAGAAACAGCGCTGCCAGACCAAACAACTAGTGTCATTGACCAAAGCCTACTAGATGCGACATGGAATAGCGAAGGAACAGCTCAAAAGTACCACGACATCGAAGAGATAAGAACTGAGTGCATTGTTTCAATTCTGAAGGTCGGAATATTGTGCTCAAAAGAGATACCAACTGATCGGATGCAAATTGGGGATGCATTGAGAGAGTTGCAGGCAATTAGAGATAGGTTTGATACACATCAGCTATAG
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| Protein seq | MRVSYAQLSKATNSFASENLIGVGSFGAVYQGRIGISDQQLVVAVKVLNLQQAGAYRSFDAECEALRCIRHRNLVKILTVCSGIDFQGSDFKALVFEFLPNGNLDQWLHKHLEEEGEPKVLNLVERLQIAIDVASALEYLHQHKPCPIVHCDLKPSNILLDNDMVAHVGDFGLARFLHQEHSNSSDKSTGWNAIRGTIGYVAPEYGLGNEVSIHGDVYSYGILLLEMFTGKRPTNSEFGDVLTLHEYVETALPDQTTSVIDQSLLDATWNSEGTAQKYHDIEEIRTECIVSILKVGILCSKEIPTDRMQIGDALRELQAIRDRFDTHQL
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | None | None | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0215900 | RBH | 0.0 | 0.247162 | 0.883589 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g12440 | RBH | 0.0 | 0.210678 | 0.347639 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0214633 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0008870 | SBH | 0.124248 | 2.860402 | 0.553048 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0008960 | RBH | 0.000000 | 0.0 | 0.208188 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0008750 | RBH | 0.0 | 0.000000 | 0.672218 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0008630 | SBH | 0.0 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0008760 | SBH | 0.130144 | 0.000000 | 1.292085 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0108900 | RBH | 0.7293755 | 2.231795 | 3.2296055 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0008590 | RBH | 0.047226 | 0.052366 | 0.060355 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0112700 | RBH | 0.448294 | 2.9449195 | 5.3632495 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0009010 | RBH | 0.000000 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0008690 | SBH | 0.029775 | 0.493149 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0008990 | RBH | 0.0 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0008970 | SBH | 0.120356 | 0.097424 | 0.112737 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0008740 | SBH | 0.0 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G008870 | RBH | 0.054619 | 0.838713 | 1.551434 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0008800 | SBH | 0.0 | 0.0 | 0.0 |
