Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_02g0024910 | OGI:02001240 | 16/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr02:26069848-26070729 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | atggagcctgagccaatcacatatgatacaactcatactcgtttcaaggcagtaacagcgtgttgttctgcttcaagcctccaatttctcctctttggtaatgtttcctacactttgtgtgccttaattatggttgtcaacttcctcacaggaacatttaggacttggctgtgataacaaaaaatatggaattaactgtaaatttgactcatgctcgctcaagaaactggataagaatcatcatatgcttgattgatcaatagctattttatttctattcatttgatatgtgttgtgttatgccctattcctattgcagctaagcagcgagccagaagcccagaacacagaagcatgcttgcagtacttgagctgctgctgctgctgctctacggagttgcaggcatccgttgctcaactgtccctgagaacagcacggatatgctctcgttgatccatttcagaaaagccattaacgacccggctggagccctgcataactgggacacaagatgctcgacgaaacaccccgggcgagtcacagcactcaacctcgccggccaaggcttgtcaggcacaatccccgcctcactcggaaacctgacttttgttcgtatacttgacctgtccaataataacttctccggccagatgcctgatcttagcaatctccagaagatacaagtccttaatctgagctacaattcgttgggtggaattatcccagacacgctcactaattgttccaacctgaaggaattacatctctatcataactccctgcgaggtgagattcccaggcaaataggtctcctcatcaatctagtttttttggcccttaacaacaacaatctaactggtgccatCcctcaatctatttag
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| CDS seq | atggagcctgagccaatcacatatgatacaactcatactcgtttcaaggcagtaacagcgtgttgttctgcttcaagcctccaatttctcctctttgctaagcagcgagccagaagcccagaacacagaagcatgcttgcagtacttgagctgctgctgctgctgctctacggagttgcaggcatccgttgctcaactgtccctgagaacagcacggatatgctctcgttgatccatttcagaaaagccattaacgacccggctggagccctgcataactgggacacaagatgctcgacgaaacaccccgggcgagtcacagcactcaacctcgccggccaaggcttgtcaggcacaatccccgcctcactcggaaacctgacttttgttcgtatacttgacctgtccaataataacttctccggccagatgcctgatcttagcaatctccagaagatacaagtccttaatctgagctacaattcgttgggtggaattatcccagacacgctcactaattgttccaacctgaaggaattacatctctatcataactccctgcgaggtgagattcccaggcaaataggtctcctcatcaatctagtttttttggcccttaacaacaacaatctaactggtgccatCcctcaatctatttag
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| Protein seq | MEPEPITYDTTHTRFKAVTACCSASSLQFLLFAKQRARSPEHRSMLAVLELLLLLLYGVAGIRCSTVPENSTDMLSLIHFRKAINDPAGALHNWDTRCSTKHPGRVTALNLAGQGLSGTIPASLGNLTFVRILDLSNNNFSGQMPDLSNLQKIQVLNLSYNSLGGIIPDTLTNCSNLKELHLYHNSLRGEIPRQIGLLINLVFLALNNNNLTGAIPQSI |
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| Function | Probable LRR receptor-like serine/threonine-protein kinase At2g23950 [UniProtKB/Swiss-Prot:Q0WVM4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_02g0024910 | OsNaBo_02g0024910.01 | Chr02 | 26069848 | 26070729 | + | NAM | ||
| CDS seq | atggagcctgagccaatcacatatgatacaactcatactcgtttcaaggcagtaacagcgtgttgttctgcttcaagcctccaatttctcctctttgctaagcagcgagccagaagcccagaacacagaagcatgcttgcagtacttgagctgctgctgctgctgctctacggagttgcaggcatccgttgctcaactgtccctgagaacagcacggatatgctctcgttgatccatttcagaaaagccattaacgacccggctggagccctgcataactgggacacaagatgctcgacgaaacaccccgggcgagtcacagcactcaacctcgccggccaaggcttgtcaggcacaatccccgcctcactcggaaacctgacttttgttcgtatacttgacctgtccaataataacttctccggccagatgcctgatcttagcaatctccagaagatacaagtccttaatctgagctacaattcgttgggtggaattatcccagacacgctcactaattgttccaacctgaaggaattacatctctatcataactccctgcgaggtgagattcccaggcaaataggtctcctcatcaatctagtttttttggcccttaacaacaacaatctaactggtgccatCcctcaatctatttag
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| Protein seq | MEPEPITYDTTHTRFKAVTACCSASSLQFLLFAKQRARSPEHRSMLAVLELLLLLLYGVAGIRCSTVPENSTDMLSLIHFRKAINDPAGALHNWDTRCSTKHPGRVTALNLAGQGLSGTIPASLGNLTFVRILDLSNNNFSGQMPDLSNLQKIQVLNLSYNSLGGIIPDTLTNCSNLKELHLYHNSLRGEIPRQIGLLINLVFLALNNNNLTGAIPQSI
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 5.407691 | 0.0 | 2.932688 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0211900 | SBH | 0.359565 | 0.246918 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g40180 | SBH | 1.164243 | 0.429848 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0211900 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0004310 | RBH | 0.053326 | 2.659473 | 0.663938 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0008630 | RBH | 0.0 | 0.0 | 0.188894 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0025060 | SBH | 8.845984 | 0.000000 | 17.735216 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0004250 | SBH | 0.061636 | 0.022630 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0004280 | RBH | 1.714308 | 1.291915 | 1.010436 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0396500 | SBH | 0.7189395 | 0.971307 | 0.895161 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0004280 | RBH | 0.048594 | 0.017924 | 0.096358 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0425400 | SBH | 1.672875 | 0.3362355 | 3.077142 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0004180 | SBH | 0.043297 | 0.057747 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0004210 | SBH | 0.000000 | 0.847441 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0004560 | SBH | 8.232897 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0024690 | SBH | 0.035031 | 0.082412 | 0.021348 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0004290 | SBH | 0.032945 | 0.534010 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G025060 | SBH | 0.363832 | 0.0 | 1.463381 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0024740 | SBH | 0.0 | 0.0 | 1.133679 |
