Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLaMu_02g0012040 | OGI:02001240 | 16/16 | LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | Chr02:10079622-10081163 | ||||||||
| Gene Symbol | LRK2, OsLRK2, OsPSKR8, PSKR8, - | ||||||||||
| DNA seq | cactgtgatgcttccacccacgagccagatgcaagaaaacattgcaaaggcaagaagtagcctcggaacaagatgtttactgtcggaattttcatttgtatgtaaactgtcaggatttggatttgatggttgacacggtgtcaagccatataatggatcaccacagatacctgtattatggtctagtgaaactacagaagaggcttcagttgtgtagaaaccaaaaaatctgccgcccaaactgttgtatgataaattcagctcaagtaatcggtaaagcatcatgaaagtcattggtatggcaccacttaaattatttctgctcaaatccaactcagttaggtcggtacaatacccaagttcttctggtattggtcctgtcagtaagttgtttcgcaggcgcaacaaggacaaatggtgaaactgtcctatctgaggtggaatgcttcccgtaaactgattgctgcttagatctagaacaaaaagattacgtagaaatcctagttctggtggcagtatatcatttagcacattggactcaagtttcagtgttattaaagatataagtttcgaaaaggttgaagggatggggccaatgattcggttgttggaaagatccatgttttgtaagctcgttagatttcctatactttcaggaatggaacccgtgatttcatttgtggagagatacaattttattaaactccttaaatttcctatactttcaggaatgaaacccgtgatttcatttgtggagagatccaaggactttaaacttgttagattccctatggttgtaggtatggagccattgatattattatgatccagatctagcgcaactaaactatgaagcatccctatctcacgtggaatatgaccaaaaagattgttaaatccaagatctagaaaatacaatctagccaggtttcccaaactggaaggtattgggccagttaagctgttgtggcttaaatcaaggtactgcaagttatgtaatgtgtcaggcaagcaactgagtatcccttgtgacaaataattgttagaaagctcaaggaatcctaggttcgtaagattacctatcgatggcgggatggatccagtgagcttattgttagagagatccaagtaagagagctcagcaagacgaccaatatcagacggaattggtccatagagagagttaatgctaaggtcgagaaagacaagatgaggcaattgtgcaaatcggagcttgctcaaaccaccggagatgttacatgagaaaagtgtaatgtatgtcacaactaggatggcatcacgctcatggccacggcgcaccttgtagctgcagtatatgcctgaccagttgcatgggctggttgcgttgctccattcctctagcccgcagtaggagagatcgccccttagaccagatttccattggagaagtgcttcagcttggcgatccaacgcaggatttgcaattgcaaggcaggaaagacactgcagcgaaatcagcagaaccagcaatagctcctgtgaggcaactagtcgtctcat
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| CDS seq | atgagacgactagttgcctcacaggagctattgctggttctgctgatttcgctgcagtgtctttcctgccttgcaattgcaaatcctgcgttggatcgccaagctgaagcacttctccaatggaaatctggtctaaggggcgatctctcctactgcgggctagaggaatggagcaacgcaaccagcccatgcaactggtcaggcatatactgcagctacaaggtgcgccgtggccatgagcgtgatgccatcctagttgtgacatacattacacttttctcatgtaacatctccggtggtttgagcaagctccgatttgcacaattgcctcatcttgtctttctcgaccttagcattaactctctctatggaccaattccgtctgatattggtcgtcttgctgagctctcttacttggatctctctaacaataagctcactggatccatcccgccatcgataggaaatctaacgagcttacaaaacatggatctttccaacaaccgaatcattggccccatcccttcaaccttttcgaaacttatatctttaataacactgaaacttgagtccaatgtgctaaatgatatactgccaccagaactaggatttctacgtaatctttttgttctagatctaagcagcaatcagtttacgggaagcattccacctcagataggacagtttcaccatttgtccttgttgcgcctgcgaaacaacttactgacaggaccaataccagaagaacttgggtattgtaccgacctaactgagttggatttgagcagaaataatttaagtggtgccataccaatgactttcatgatgctttaccgattacttgagctgaatttatcatacaacagtttgggcggcagattttttggtttctacacaactgaagcctcttctgtagtttcactagaccataatacaggtatctgtggtgatccattatatggcttgacaccgtgtcaaccatcaaatccaaatcctgacagtttacatacaaatgaaaattccgacagtaaacatcttgttccgaggctacttcttgcctttgcaatgttttcttgcatctggctcgtgggtggaagcatcacagtg
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| Protein seq | MRRLVASQELLLVLLISLQCLSCLAIANPALDRQAEALLQWKSGLRGDLSYCGLEEWSNATSPCNWSGIYCSYKVRRGHERDAILVVTYITLFSCNISGGLSKLRFAQLPHLVFLDLSINSLYGPIPSDIGRLAELSYLDLSNNKLTGSIPPSIGNLTSLQNMDLSNNRIIGPIPSTFSKLISLITLKLESNVLNDILPPELGFLRNLFVLDLSSNQFTGSIPPQIGQFHHLSLLRLRNNLLTGPIPEELGYCTDLTELDLSRNNLSGAIPMTFMMLYRLLELNLSYNSLGGRFFGFYTTEASSVVSLDHNTGICGDPLYGLTPCQPSNPNPDSLHTNENSDSKHLVPRLLLAFAMFSCIWLVGGSITV |
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| Function | MDIS1-interacting receptor like kinase 2 [UniProtKB/Swiss-Prot:Q8VZG8] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLaMu_02g0012040 | OsLaMu_02g0012040.01 | Chr02 | 10079622 | 10081163 | - | NAM | ||
| CDS seq | atgagacgactagttgcctcacaggagctattgctggttctgctgatttcgctgcagtgtctttcctgccttgcaattgcaaatcctgcgttggatcgccaagctgaagcacttctccaatggaaatctggtctaaggggcgatctctcctactgcgggctagaggaatggagcaacgcaaccagcccatgcaactggtcaggcatatactgcagctacaaggtgcgccgtggccatgagcgtgatgccatcctagttgtgacatacattacacttttctcatgtaacatctccggtggtttgagcaagctccgatttgcacaattgcctcatcttgtctttctcgaccttagcattaactctctctatggaccaattccgtctgatattggtcgtcttgctgagctctcttacttggatctctctaacaataagctcactggatccatcccgccatcgataggaaatctaacgagcttacaaaacatggatctttccaacaaccgaatcattggccccatcccttcaaccttttcgaaacttatatctttaataacactgaaacttgagtccaatgtgctaaatgatatactgccaccagaactaggatttctacgtaatctttttgttctagatctaagcagcaatcagtttacgggaagcattccacctcagataggacagtttcaccatttgtccttgttgcgcctgcgaaacaacttactgacaggaccaataccagaagaacttgggtattgtaccgacctaactgagttggatttgagcagaaataatttaagtggtgccataccaatgactttcatgatgctttaccgattacttgagctgaatttatcatacaacagtttgggcggcagattttttggtttctacacaactgaagcctcttctgtagtttcactagaccataatacaggtatctgtggtgatccattatatggcttgacaccgtgtcaaccatcaaatccaaatcctgacagtttacatacaaatgaaaattccgacagtaaacatcttgttccgaggctacttcttgcctttgcaatgttttcttgcatctggctcgtgggtggaagcatcacagtg
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| Protein seq | MRRLVASQELLLVLLISLQCLSCLAIANPALDRQAEALLQWKSGLRGDLSYCGLEEWSNATSPCNWSGIYCSYKVRRGHERDAILVVTYITLFSCNISGGLSKLRFAQLPHLVFLDLSINSLYGPIPSDIGRLAELSYLDLSNNKLTGSIPPSIGNLTSLQNMDLSNNRIIGPIPSTFSKLISLITLKLESNVLNDILPPELGFLRNLFVLDLSSNQFTGSIPPQIGQFHHLSLLRLRNNLLTGPIPEELGYCTDLTELDLSRNNLSGAIPMTFMMLYRLLELNLSYNSLGGRFFGFYTTEASSVVSLDHNTGICGDPLYGLTPCQPSNPNPDSLHTNENSDSKHLVPRLLLAFAMFSCIWLVGGSITV
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0277700 | RBH | 0.0 | 0.347361 | 0.606831 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g17710 | RBH | 0.0 | 0.242447 | 0.149860 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0277700 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0004120 | RBH | 0.124114 | 14.442955 | 1.259517 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0021010 | SBH | 0.036886 | 0.207486 | 0.122091 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0004360 | SBH | 0.038443 | 0.407024 | 0.900679 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0020740 | RBH | 0.027518 | 0.028389 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0012000 | RBH | 0.0 | 0.0 | 1.326172 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0158700 | RBH | 0.409061 | 0.4002855 | 1.0257465 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0004280 | SBH | 0.048594 | 0.017924 | 0.096358 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0171200 | RBH | 0.250536 | 0.462533 | 2.4877495 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0004550 | SBH | 0.022579 | 0.127643 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0004210 | SBH | 0.000000 | 0.847441 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0021060 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0012260 | RBH | 0.336139 | 0.121279 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0004290 | SBH | 0.032945 | 0.534010 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G004310 | SBH | 0.850914 | 0.737580 | 0.524094 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0004260 | SBH | 0.000000 | 0.353235 | 0.384476 |
