Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsKeNa_02g0025120 | OGI:02001240 | 16/16 | KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | Chr02:24469984-24470998 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | atgagatgcgtagacaaaagctttatatcagaatgtgaggttttgagaagtattcgacatcgaaatttccttcctattctaacagcatgttcaataatagacaatataggtaatgatttcaaggctctgatttatgaattcatgccaaatgggagtttggacaaatgggacaaatggttacataagaaatcgtcccatgaagctacaaataatttgggcgtagggcaaagaataagcatagctgctaatatagctgatgcattaagctatttgcaccatgacagcagaacatccattgtccattgtgatttgaagcctagcaatatcctcctagttgctgatatgaatgcttatttgggtgactttgggatttcgaaccttgtccataattctacatcaacatcggcttgccattcaggtgtagattcaagtttgaacagctcaatcggattaaggggaactattggatatattggtccaggtttagttatttcaacatcttgaattcatgtaaagcaatctattgtttactgtaacaagtgagctttacactgaactaactagctagtgtaattttatcctttttcagagtatgctcaaagttggcaaccatcaatttgtggggatgtttacagtttcggaatagtacttctagagatagtgcttggcaaaagacctacggatcccgtgtttgacaatggactgagcattgtcaattttgtcgagaggaactttccgaataagattgcacaggtaattgatgttaatctccaagaagagtgcaggggattcattgaagcaacagaagtagaagaaaatgaggtttatcaatgcctgctgttcctcctgcaagttgctatttcttgtacacgccgatgtccaagggaacggatgaacatgagagaagtagccaacaggttgcacgcaattaaaatttcatatgatgcagtgtccaatcgaatgcaagccaggcttcaacatagagatctacgtaccatgatctgagccagtttaa
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| CDS seq | atgagatgcgtagacaaaagctttatatcagaatgtgaggttttgagaagtattcgacatcgaaatttccttcctattctaacagcatgttcaataatagacaatataggtaatgatttcaaggctctgatttatgaattcatgccaaatgggagtttggacaaatgggacaaatggttacataagaaatcgtcccatgaagctacaaataatttgggcgtagggcaaagaataagcatagctgctaatatagctgatgcattaagctatttgcaccatgacagcagaacatccattgtccattgtgatttgaagcctagcaatatcctcctagttgctgatatgaatgcttatttgggtgactttgggatttcgaaccttgtccataattctacatcaacatcggcttgccattcaggtgtagattcaagtttgaacagctcaatcggattaaggggaactattggatatattggtccagagtatgctcaaagttggcaaccatcaatttgtggggatgtttacagtttcggaatagtacttctagagatagtgcttggcaaaagacctacggatcccgtgtttgacaatggactgagcattgtaattgatgttaatctccaagaagagtgcaggggattcattgaagcaacagaagtagaagaaaatgaggtttatcaatgcctgctgttcctcctgcaagttgctatttcttgtacacgccgatgtccaagggaacggatgaacatgagagaagtagccaacaggttgcacgcaattaaaatttcatatgatgcagtgtccaatcgaatgcaagccaggcttcaacatagagatctacgtaccatgatctga
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| Protein seq | MRCVDKSFISECEVLRSIRHRNFLPILTACSIIDNIGNDFKALIYEFMPNGSLDKWDKWLHKKSSHEATNNLGVGQRISIAANIADALSYLHHDSRTSIVHCDLKPSNILLVADMNAYLGDFGISNLVHNSTSTSACHSGVDSSLNSSIGLRGTIGYIGPEYAQSWQPSICGDVYSFGIVLLEIVLGKRPTDPVFDNGLSIVIDVNLQEECRGFIEATEVEENEVYQCLLFLLQVAISCTRRCPRERMNMREVANRLHAIKISYDAVSNRMQARLQHRDLRTMI |
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| Function | Putative receptor-like protein kinase At3g47110 [UniProtKB/Swiss-Prot:Q9SD62] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_02g0025120 | OsKeNa_02g0025120.01 | Chr02 | 24469984 | 24470998 | + | NAM | ||
| CDS seq | atgagatgcgtagacaaaagctttatatcagaatgtgaggttttgagaagtattcgacatcgaaatttccttcctattctaacagcatgttcaataatagacaatataggtaatgatttcaaggctctgatttatgaattcatgccaaatgggagtttggacaaatgggacaaatggttacataagaaatcgtcccatgaagctacaaataatttgggcgtagggcaaagaataagcatagctgctaatatagctgatgcattaagctatttgcaccatgacagcagaacatccattgtccattgtgatttgaagcctagcaatatcctcctagttgctgatatgaatgcttatttgggtgactttgggatttcgaaccttgtccataattctacatcaacatcggcttgccattcaggtgtagattcaagtttgaacagctcaatcggattaaggggaactattggatatattggtccagagtatgctcaaagttggcaaccatcaatttgtggggatgtttacagtttcggaatagtacttctagagatagtgcttggcaaaagacctacggatcccgtgtttgacaatggactgagcattgtaattgatgttaatctccaagaagagtgcaggggattcattgaagcaacagaagtagaagaaaatgaggtttatcaatgcctgctgttcctcctgcaagttgctatttcttgtacacgccgatgtccaagggaacggatgaacatgagagaagtagccaacaggttgcacgcaattaaaatttcatatgatgcagtgtccaatcgaatgcaagccaggcttcaacatagagatctacgtaccatgatctga
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| Protein seq | MRCVDKSFISECEVLRSIRHRNFLPILTACSIIDNIGNDFKALIYEFMPNGSLDKWDKWLHKKSSHEATNNLGVGQRISIAANIADALSYLHHDSRTSIVHCDLKPSNILLVADMNAYLGDFGISNLVHNSTSTSACHSGVDSSLNSSIGLRGTIGYIGPEYAQSWQPSICGDVYSFGIVLLEIVLGKRPTDPVFDNGLSIVIDVNLQEECRGFIEATEVEENEVYQCLLFLLQVAISCTRRCPRERMNMREVANRLHAIKISYDAVSNRMQARLQHRDLRTMI
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.148515 | 0.000000 | 0.000000 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0615500 | SBH | 1.178434 | 1.962854 | 0.176804 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g40200 | SBH | 0.796918 | 1.233021 | 0.045513 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0615500 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0024890 | RBH | 0.266269 | 0.551824 | 0.649657 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0025230 | SBH | 0.246092 | 0.000000 | 0.510617 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0025050 | SBH | 0.778974 | 0.000000 | 0.521185 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0024760 | SBH | 1.656805 | 0.0 | 1.365528 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0396200 | SBH | 0.414616 | 0.170244 | 0.1532725 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0024520 | SBH | 3.396347 | 0.0 | 0.280036 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0425400 | SBH | 1.672875 | 0.3362355 | 3.077142 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0024730 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0020940 | SBH | 0.341850 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0024690 | SBH | 0.035031 | 0.082412 | 0.021348 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0004850 | SBH | 0.056974 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G025040 | SBH | 0.195552 | 0.233716 | 0.311096 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0024890 | SBH | 0.206270 | 0.000000 | 0.311611 |
