Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsCMeo_02g0009220 | OGI:02020400 | 5/16 | CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | Chr02:6901738-6904221 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | TCAGCTCTCACCTGGTGCCATGTACCCAAAAGTTCCAGCTATAGCAGAAAATGACTCGTCTTCTCCAGCTCTGAGAAGAATCTTTGCAAGCCCAAAATCTGCCATCTTTGCTCTGAAGTTGGGATCTAGAAGAATGTTGGCAGACTTGACATCTCGATGCACTATGGGAGGCGAGCAATGGTGGTGCATGTAGCAAAGACCTCTTGCTGAGTCGATGGCAATTTGCAATCTTGTTGGCCAATCCAGAGGTCCTGGCGCACCAATTCTTTCCCTCTGGTGAAGCCACTGATGTAGGCTGCCATTTTCCATGTACTCGTAGACAAGAAGCTTTGCCTCTGAACTTGAGATGCAACATAGCAGCTTGACAATGTTTAAGTGCCTGATCTCTCCCAATATCTGAACCTCTGCAAGGAAGTCCTTCTCCAGCTCGTTATCAAGATTTTGCATGTTCCATATCTTTTTGACAGTCACCATCATGCCACCACTTGCTCTATCCCCAGCATAAACACGGTACACCTTGCCAGACCTGCCACTTCCAATCCAATTCTGCTCGCAGAGCCCCGAAAGAATGTCATTCTCGGTGAAATGCAATGCATGGAAGGGTGTTAACTTCCATGACAAGTGATCTTGTGTACGCTTTTTCCTTCTTAAGAGCATGAAACCAATCACTGCCAAAACCAAAAGCCCAATGCTGGCAAGAGCAGAAATGATGGCCCCGTTGCTGATGTTTGTTCTTGCCCTGCAGATAGGGAAATTTTGGAGTGAATTGCTCGATGAGACACAGAGGCCTGGGTTGAATAGGAAGCTCTGCTCATATGTTTTGTTTTGAAATGACGTTGGAATTTCCCCTGTTAGTTGGTTCATAGAGAGATTCAAAAATCTGAGCATCAGCTTACTAAAATCCTTTGGGATCTCACCAGATAGCTCATTCGATGAGAGATCAAGGATGGTTAGTACTGTCATGAACCCAAACGCCGCAGGAATATTACCAGATATATGATTTCCACTTAGGTTAATTGCGTTTAGCTTTGTCAGCACTCCTATTGTCATGGGTAGTGAGCCACTAATTTGATTCCTAGATAAGTCAAATTCTGTGACCTGAGAAATGCCTGTCAGGTCCCAGGGAATTTCACCAGACAGCAAGTTGTTTGCTGCTCTCAATATTTCCATTTTGCCTCCCATTGTTGGAATGGGACCTGAGAATCTGTTGTTGCTGATGTCAAGACGTGTATAGTTCCATGGGAGCTTGGTGGGCAATGTGCCAGAGAAGCTAATGTTTTGTATCATAACTGTACTTAGCTGATTTGTCACCACTGACCAAAGGCCCTGGGGGAACTCTCCAGAAAAATTATTATTGTACAACACCAAATTTTGCAACAGATAGCAGCCGTCCAATGAAGATGGAAGTTTTCCAGAAAAGCTGTTATTGAACACAGCAATGCCATATAGCTTCCTGTTGAAGCAGATGTCTTCTGGTAGCTCCCCAGAGAGGTTATTATTGGAGACCTCAAGATTGGCCAGTGGCGAGTGCTTACCAAGCTCTGGTGGGAGCAATCCAGAGAGCATGTTATTGGATAACCGGATGTCAGTAAGCTTTGGTAGCAATTCGATGCTGGGTGGTATCGTTCCTGTTAATTCGTTCACAGAAACAACAATCTCCACCAAGTTCAAGGCACTGACATTGGGTTCAATCTCACCGGTGAATCTGTTTGTATGCAGGTCCAAAATCTTAAGTTTCTTATGCTGCCAGATCCACGTTGGAATTTTTCCTTCCAGACTGTTCATTGACAAATCCAAGAGGTTGAGCTCTCTGAGGCTGGACAAGCTTTCAGGGATTTCACCGGTAATATTCATATTTGACAGCCACAAGAAAGTCAGACGTGTCAACCTACCAAACTCCACTGGCACTGGAGCCAGTATGAATGGATTGTGTGCTAGTGTCAGCACCTCAAGGTCAGCAAGATTGCTGATATCCTCGGCTGGGTAGCTCCCATCAAACTGATTGGTGTCAAGGAGCAACGACTTGAGCCTTGGGAACCATCCGATTGATGGTGGAATGTTGCCGGTGAAACGATTAGATGATAGGTTGAGATGCTCGAACAGTGCTGATAGATGATTTAAGTCACTTGGGAGCTGTCCGGCAAATGCGTTGTTGGAAAGGTCTAGGTACTTGAGATTGGAGCAATTGTAGAGCACGGTAGGGAATGAAGTGGAGAAATTGTTGTAGGAGAGGTCCAAGTGGGTGAGGTTCTTAAGGAGACAAATGGAGGGAGGAAGTGGTTTGACGATGATTTGGTTTGGTAGAGAGATGCCAGTCACTGAACCTTTCGTGCATGTAATTCCTCCCCAGTTGCAGTGAGGAGCATAAGCGGAGTTCCATCTACCTAGCATAGGCGAGCTCCCCCATTGTTTCTTGAGTTCAAGGAGTATTTGGTGTTCATCATTTTTTGCCTGGACGGCCAAAGATTGGCCGGCCAATTTCAT
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| CDS seq | ATGAAATTGGCCGGCCAATCTTTGGCCGTCCAGGCAAAAAATGATGAACACCAAATACTCCTTGAACTCAAGAAACAATGGGGGAGCTCGCCTATGCTAGGTAGATGGAACTCCGCTTATGCTCCTCACTGCAACTGGGGAGGAATTACATGCACGAAAGGTTCAGTGACTGGCATCTCTCTACCAAACCAAATCATCGTCAAACCACTTCCTCCCTCCATTTGTCTCCTTAAGAACCTCACCCACTTGGACCTCTCCTACAACAATTTCTCCACTTCATTCCCTACCGTGCTCTACAATTGCTCCAATCTCAAGTACCTAGACCTTTCCAACAACGCATTTGCCGGACAGCTCCCAAGTGACTTAAATCATCTATCAGCACTGTTCGAGCATCTCAACCTATCATCTAATCGTTTCACCGGCAACATTCCACCATCAATCGGATGGTTCCCAAGGCTCAAGTCGTTGCTCCTTGACACCAATCAGTTTGATGGGAGCTACCCAGCCGAGGATATCAGCAATCTTGCTGACCTTGAGGTGCTGACACTAGCACACAATCCATTCATACTGGCTCCAGTGCCAGTGGAGTTTGGTAGGTTGACACGTCTGACTTTCTTGTGGCTGTCAAATATGAATATTACCGGTGAAATCCCTGAAAGCTTGTCCAGCCTCAGAGAGCTCAACCTCTTGGATTTGTCAATGAACAGTCTGGAAGGAAAAATTCCAACGTGGATCTGGCAGCATAAGAAACTTAAGATTTTGGACCTGCATACAAACAGATTCACCGGTGAGATTGAACCCAATGTCAGTGCCTTGAACTTGGTGGAGATTGTTGTTTCTGTGAACGAATTAACAGGAACGATACCACCCAGCATCGAATTGCTACCAAAGCTTACTGACATCCGGTTATCCAATAACATGCTCTCTGGATTGCTCCCACCAGAGCTTGGTAAGCACTCGCCACTGGCCAATCTTGAGGTCTCCAATAATAACCTCTCTGGGGAGCTACCAGAAGACATCTGCTTCAACAGGAAGCTATATGGCATTGCTGTGTTCAATAACAGCTTTTCTGGAAAACTTCCATCTTCATTGGACGGCTGCTATCTGTTGCAAAATTTGGTGTTGTACAATAATAATTTTTCTGGAGAGTTCCCCCAGGGCCTTTGGTCAGTGGTGACAAATCAGCTAAGTACAGTTATGATACAAAACATTAGCTTCTCTGGCACATTGCCCACCAAGCTCCCATGGAACTATACACTGATTGGTTTCATGCTCTTAAGAAGGAAAAAGCGTACACAAGATCACTTGTCATGGAAGTTAACACCCTTCCATGCATTGCATTTCACCGAGAATGACATTCTTTCGGGGCTCTGCGAGCAGAATTGGATTGGAAGTGGCAGGTCTGGCAAGGTGTACCGTGTTTATGCTGGGGATAGAGCAAGTGCAAGAGGTCTTTGCTACATGCACCACCATTGCTCGCCTCCCATAGTGCATCGAGATGTCAAGTCTGCCAACATTCTTCTAGATCCCAACTTCAGAGCAAAGATGGCAGATTTTGGGCTTGCAAAGATTCTTCTCAGAGCTGGAGAAGACGAGTCATTTTCTGCTATAGCTGGAACTTTTGGGTACATGGCACCAGGTGAGAGCTGA
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| Protein seq | MKLAGQSLAVQAKNDEHQILLELKKQWGSSPMLGRWNSAYAPHCNWGGITCTKGSVTGISLPNQIIVKPLPPSICLLKNLTHLDLSYNNFSTSFPTVLYNCSNLKYLDLSNNAFAGQLPSDLNHLSALFEHLNLSSNRFTGNIPPSIGWFPRLKSLLLDTNQFDGSYPAEDISNLADLEVLTLAHNPFILAPVPVEFGRLTRLTFLWLSNMNITGEIPESLSSLRELNLLDLSMNSLEGKIPTWIWQHKKLKILDLHTNRFTGEIEPNVSALNLVEIVVSVNELTGTIPPSIELLPKLTDIRLSNNMLSGLLPPELGKHSPLANLEVSNNNLSGELPEDICFNRKLYGIAVFNNSFSGKLPSSLDGCYLLQNLVLYNNNFSGEFPQGLWSVVTNQLSTVMIQNISFSGTLPTKLPWNYTLIGFMLLRRKKRTQDHLSWKLTPFHALHFTENDILSGLCEQNWIGSGRSGKVYRVYAGDRASARGLCYMHHHCSPPIVHRDVKSANILLDPNFRAKMADFGLAKILLRAGEDESFSAIAGTFGYMAPGES |
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| Function | Receptor-like protein 52 [UniProtKB/Swiss-Prot:Q7FZR1] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_02g0009220 | OsCMeo_02g0009220.01 | Chr02 | 6901738 | 6904221 | - | NAM | ||
| CDS seq | ATGAAATTGGCCGGCCAATCTTTGGCCGTCCAGGCAAAAAATGATGAACACCAAATACTCCTTGAACTCAAGAAACAATGGGGGAGCTCGCCTATGCTAGGTAGATGGAACTCCGCTTATGCTCCTCACTGCAACTGGGGAGGAATTACATGCACGAAAGGTTCAGTGACTGGCATCTCTCTACCAAACCAAATCATCGTCAAACCACTTCCTCCCTCCATTTGTCTCCTTAAGAACCTCACCCACTTGGACCTCTCCTACAACAATTTCTCCACTTCATTCCCTACCGTGCTCTACAATTGCTCCAATCTCAAGTACCTAGACCTTTCCAACAACGCATTTGCCGGACAGCTCCCAAGTGACTTAAATCATCTATCAGCACTGTTCGAGCATCTCAACCTATCATCTAATCGTTTCACCGGCAACATTCCACCATCAATCGGATGGTTCCCAAGGCTCAAGTCGTTGCTCCTTGACACCAATCAGTTTGATGGGAGCTACCCAGCCGAGGATATCAGCAATCTTGCTGACCTTGAGGTGCTGACACTAGCACACAATCCATTCATACTGGCTCCAGTGCCAGTGGAGTTTGGTAGGTTGACACGTCTGACTTTCTTGTGGCTGTCAAATATGAATATTACCGGTGAAATCCCTGAAAGCTTGTCCAGCCTCAGAGAGCTCAACCTCTTGGATTTGTCAATGAACAGTCTGGAAGGAAAAATTCCAACGTGGATCTGGCAGCATAAGAAACTTAAGATTTTGGACCTGCATACAAACAGATTCACCGGTGAGATTGAACCCAATGTCAGTGCCTTGAACTTGGTGGAGATTGTTGTTTCTGTGAACGAATTAACAGGAACGATACCACCCAGCATCGAATTGCTACCAAAGCTTACTGACATCCGGTTATCCAATAACATGCTCTCTGGATTGCTCCCACCAGAGCTTGGTAAGCACTCGCCACTGGCCAATCTTGAGGTCTCCAATAATAACCTCTCTGGGGAGCTACCAGAAGACATCTGCTTCAACAGGAAGCTATATGGCATTGCTGTGTTCAATAACAGCTTTTCTGGAAAACTTCCATCTTCATTGGACGGCTGCTATCTGTTGCAAAATTTGGTGTTGTACAATAATAATTTTTCTGGAGAGTTCCCCCAGGGCCTTTGGTCAGTGGTGACAAATCAGCTAAGTACAGTTATGATACAAAACATTAGCTTCTCTGGCACATTGCCCACCAAGCTCCCATGGAACTATACACTGATTGGTTTCATGCTCTTAAGAAGGAAAAAGCGTACACAAGATCACTTGTCATGGAAGTTAACACCCTTCCATGCATTGCATTTCACCGAGAATGACATTCTTTCGGGGCTCTGCGAGCAGAATTGGATTGGAAGTGGCAGGTCTGGCAAGGTGTACCGTGTTTATGCTGGGGATAGAGCAAGTGCAAGAGGTCTTTGCTACATGCACCACCATTGCTCGCCTCCCATAGTGCATCGAGATGTCAAGTCTGCCAACATTCTTCTAGATCCCAACTTCAGAGCAAAGATGGCAGATTTTGGGCTTGCAAAGATTCTTCTCAGAGCTGGAGAAGACGAGTCATTTTCTGCTATAGCTGGAACTTTTGGGTACATGGCACCAGGTGAGAGCTGA
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| Protein seq | MKLAGQSLAVQAKNDEHQILLELKKQWGSSPMLGRWNSAYAPHCNWGGITCTKGSVTGISLPNQIIVKPLPPSICLLKNLTHLDLSYNNFSTSFPTVLYNCSNLKYLDLSNNAFAGQLPSDLNHLSALFEHLNLSSNRFTGNIPPSIGWFPRLKSLLLDTNQFDGSYPAEDISNLADLEVLTLAHNPFILAPVPVEFGRLTRLTFLWLSNMNITGEIPESLSSLRELNLLDLSMNSLEGKIPTWIWQHKKLKILDLHTNRFTGEIEPNVSALNLVEIVVSVNELTGTIPPSIELLPKLTDIRLSNNMLSGLLPPELGKHSPLANLEVSNNNLSGELPEDICFNRKLYGIAVFNNSFSGKLPSSLDGCYLLQNLVLYNNNFSGEFPQGLWSVVTNQLSTVMIQNISFSGTLPTKLPWNYTLIGFMLLRRKKRTQDHLSWKLTPFHALHFTENDILSGLCEQNWIGSGRSGKVYRVYAGDRASARGLCYMHHHCSPPIVHRDVKSANILLDPNFRAKMADFGLAKILLRAGEDESFSAIAGTFGYMAPGES
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.000000 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0615400 | SBH | 1.810530 | 3.247144 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g12910 | SBH | 0.164886 | 0.396880 | 0.191521 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0615400 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0009270 | RBH | 0.114755 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0009360 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0019410 | SBH | 0.616311 | 12.548592 | 3.171643 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0009020 | SBH | 0.341281 | 0.149573 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0009160 | SBH | 0.000000 | 0.000000 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0120100 | SBH | 0.033817 | 0.273829 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0008980 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0118500 | SBH | 0.645206 | 4.2648105 | 0.462081 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0009420 | SBH | 0.070812 | 0.101563 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0003980 | SBH | 0.070042 | 4.234505 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0004260 | SBH | 3.191976 | 29.049385 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0004210 | SBH | 0.087713 | 0.227309 | 0.100002 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0004290 | SBH | 0.032945 | 0.534010 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G004310 | SBH | 0.850914 | 0.737580 | 0.524094 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0004010 | SBH | 0.630622 | 3.130005 | 0.941510 |
