Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsCMeo_02g0008690 | OGI:02018990 | 15/16 | CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | Chr02:6457919-6459589 | ||||||||
| Gene Symbol | TMS10, OsSERK4, OsSERL9, OsSERK2, OsBAK1-5, OsTMS10, SERK4, SERL9, SERK2, BAK1-5, OsBAK1, BAK1 | ||||||||||
| DNA seq | GGTGCAAAGTTCTATTGATAGAACAGGAAAAAATTAAAAGATTACAACTGTAAGATCGTAACCAGGAAAAAAGAGGCTTAAAGTCTTCAAGATAAGTTTTTAAAACGAGTCCAAGCCGCCGGGCAGACTGCGAATTTGCAAACCCGTCGAATGCCAGCCAGTGCACCCACAACTTGTTACTTGGCTTGAATCAAACTACACAGTGGCAAGTGCTCCTTCCAGCTATATATTAATCACATCATAACCTTCAATTTGCCTTAAGAGATATAGCAGAAAAGAAAGGACCAACCAACAGCGGCAGCAATGGTGTTGATCCACCATACCCATGACCATGAGCTTCTCTTGCTCGCCATCATCATTTTTCTTTCGTGCTCTAACAATGGCCATGCCTCCCCGGCCTCACCTTCTTCATCCACCACCACCAACGTCACCGACCGCCTTGCGCTCATGTCATTCAGGTCGCTCATAAGGAGTGACCCAACCCAGGCACTCGCATCCTGGGGCAACCAATCCATCCCGATGTGCCAATGGCGTGGTGTGGCGTGTGGGCTAAGTGGACGCCGCACAGGCCGTGTGGTGGCGCTGGACCTCACCAAGCTCAACCTTGTAGGCGCCATCTCACCTTTGCTCGGCAACCTCACATACCTGAGGCGGCTCCATCTCCACAAGAATCGCCTCCATGGCGAGATACCGTCGGAGCTCGGCCATCTCCGAGACCTGAGACACCTCAACCTCAGCTACAACTCCATCCAAGGGCCGATCCCGGCGACGCTTTCAACCTGCAGAGGAATGGAGAACATTTGGCTCTACAGCAACAAGCTGCAGGGCCAAATACCAAGTGAGTTTGGATCCCTGCAAAATCTTCAGGCACTTGTTCTTGGGGAAAATAGACTTACTGGAAGCATCCCTTCATTCATTGGAAGCCTCGCGAATCTGAAATTTCTAATCCTAGAAGAAAACAACTTTACAGGAGAAATTCCATCAGACATAAGCAGACTGGCCAATCTCACTGTTCTAGGACTAGGTTCTAATCAACTCTCAGGACCAATTCCTGCCTCAATAGGAAATCTCTCGGCACTACAATTTCTTAGTGTCTTCTCTAATAACCTGGTAGGAAGCATCCCACCGATGCAACGCTTGTCCTCTCTCGAATTCTTTGAACTAGGGAAGAACAATATCGAAGGAAGCATCCCAACTTGGCTGGGAAACCTCTCATCATTACTTACTGTGAAACTTGGAGGCAATAGACTAGATGGGAACATCCCTGAATCACTGGGGAAACTGAAGTTGCTTACATCTCTTGATCTATCAAGTAATAATCTAGTGGGCCCAGTACCTGATACTATTGGAAACCTATATTCCATTAAGCAGTTTCATGTAGAAAATAATGAGCTAGAAGGTTCTTTACCTTCTTCAATATTCAATCTTTCCTCTCTTGAAGAACTCAACTTACAAACCAACAACCTAAATGGGACCATTCCACTTGACTTAGGCAACCGCCTGCCAAAGCTCCAGTTATTCCTAATATCTGAAAACCAGTTTCATGGCTCAATTCCACCCTCCCTGTGCAATATTTCTACGCTTAGATGGATCCAAACAGTAAACAATTCTTTGTCAGGAACCATCCCCCAATGCATAGGAAAGAAGTACCGCATGATTTATTTCTTTTAA
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| CDS seq | ATGGTGTTGATCCACCATACCCATGACCATGAGCTTCTCTTGCTCGCCATCATCATTTTTCTTTCGTGCTCTAACAATGGCCATGCCTCCCCGGCCTCACCTTCTTCATCCACCACCACCAACGTCACCGACCGCCTTGCGCTCATGTCATTCAGGTCGCTCATAAGGAGTGACCCAACCCAGGCACTCGCATCCTGGGGCAACCAATCCATCCCGATGTGCCAATGGCGTGGTGTGGCGTGTGGGCTAAGTGGACGCCGCACAGGCCGTGTGGTGGCGCTGGACCTCACCAAGCTCAACCTTGTAGGCGCCATCTCACCTTTGCTCGGCAACCTCACATACCTGAGGCGGCTCCATCTCCACAAGAATCGCCTCCATGGCGAGATACCGTCGGAGCTCGGCCATCTCCGAGACCTGAGACACCTCAACCTCAGCTACAACTCCATCCAAGGGCCGATCCCGGCGACGCTTTCAACCTGCAGAGGAATGGAGAACATTTGGCTCTACAGCAACAAGCTGCAGGGCCAAATACCAAGTGAGTTTGGATCCCTGCAAAATCTTCAGGCACTTGTTCTTGGGGAAAATAGACTTACTGGAAGCATCCCTTCATTCATTGGAAGCCTCGCGAATCTGAAATTTCTAATCCTAGAAGAAAACAACTTTACAGGAGAAATTCCATCAGACATAAGCAGACTGGCCAATCTCACTGTTCTAGGACTAGGTTCTAATCAACTCTCAGGACCAATTCCTGCCTCAATAGGAAATCTCTCGGCACTACAATTTCTTAGTGTCTTCTCTAATAACCTGGTAGGAAGCATCCCACCGATGCAACGCTTGTCCTCTCTCGAATTCTTTGAACTAGGGAAGAACAATATCGAAGGAAGCATCCCAACTTGGCTGGGAAACCTCTCATCATTACTTACTGTGAAACTTGGAGGCAATAGACTAGATGGGAACATCCCTGAATCACTGGGGAAACTGAAGTTGCTTACATCTCTTGATCTATCAAGTAATAATCTAGTGGGCCCAGTACCTGATACTATTGGAAACCTATATTCCATTAAGCAGTTTCATGTAGAAAATAATGAGCTAGAAGGTTCTTTACCTTCTTCAATATTCAATCTTTCCTCTCTTGAAGAACTCAACTTACAAACCAACAACCTAAATGGGACCATTCCACTTGACTTAGGCAACCGCCTGCCAAAGCTCCAGTTATTCCTAATATCTGAAAACCAGTTTCATGGCTCAATTCCACCCTCCCTGTGCAATATTTCTACGCTTAGATGGATCCAAACAGTAAACAATTCTTTGTCAGGAACCATCCCCCAATGCATAGGAAAGAAGTACCGCATGATTTATTTCTTTTAA
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| Protein seq | MVLIHHTHDHELLLLAIIIFLSCSNNGHASPASPSSSTTTNVTDRLALMSFRSLIRSDPTQALASWGNQSIPMCQWRGVACGLSGRRTGRVVALDLTKLNLVGAISPLLGNLTYLRRLHLHKNRLHGEIPSELGHLRDLRHLNLSYNSIQGPIPATLSTCRGMENIWLYSNKLQGQIPSEFGSLQNLQALVLGENRLTGSIPSFIGSLANLKFLILEENNFTGEIPSDISRLANLTVLGLGSNQLSGPIPASIGNLSALQFLSVFSNNLVGSIPPMQRLSSLEFFELGKNNIEGSIPTWLGNLSSLLTVKLGGNRLDGNIPESLGKLKLLTSLDLSSNNLVGPVPDTIGNLYSIKQFHVENNELEGSLPSSIFNLSSLEELNLQTNNLNGTIPLDLGNRLPKLQLFLISENQFHGSIPPSLCNISTLRWIQTVNNSLSGTIPQCIGKKYRMIYFF |
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| Function | Probable LRR receptor-like serine/threonine-protein kinase At3g47570 [UniProtKB/Swiss-Prot:C0LGP4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_02g0008690 | OsCMeo_02g0008690.01 | Chr02 | 6457919 | 6459589 | + | NAM | ||
| CDS seq | ATGGTGTTGATCCACCATACCCATGACCATGAGCTTCTCTTGCTCGCCATCATCATTTTTCTTTCGTGCTCTAACAATGGCCATGCCTCCCCGGCCTCACCTTCTTCATCCACCACCACCAACGTCACCGACCGCCTTGCGCTCATGTCATTCAGGTCGCTCATAAGGAGTGACCCAACCCAGGCACTCGCATCCTGGGGCAACCAATCCATCCCGATGTGCCAATGGCGTGGTGTGGCGTGTGGGCTAAGTGGACGCCGCACAGGCCGTGTGGTGGCGCTGGACCTCACCAAGCTCAACCTTGTAGGCGCCATCTCACCTTTGCTCGGCAACCTCACATACCTGAGGCGGCTCCATCTCCACAAGAATCGCCTCCATGGCGAGATACCGTCGGAGCTCGGCCATCTCCGAGACCTGAGACACCTCAACCTCAGCTACAACTCCATCCAAGGGCCGATCCCGGCGACGCTTTCAACCTGCAGAGGAATGGAGAACATTTGGCTCTACAGCAACAAGCTGCAGGGCCAAATACCAAGTGAGTTTGGATCCCTGCAAAATCTTCAGGCACTTGTTCTTGGGGAAAATAGACTTACTGGAAGCATCCCTTCATTCATTGGAAGCCTCGCGAATCTGAAATTTCTAATCCTAGAAGAAAACAACTTTACAGGAGAAATTCCATCAGACATAAGCAGACTGGCCAATCTCACTGTTCTAGGACTAGGTTCTAATCAACTCTCAGGACCAATTCCTGCCTCAATAGGAAATCTCTCGGCACTACAATTTCTTAGTGTCTTCTCTAATAACCTGGTAGGAAGCATCCCACCGATGCAACGCTTGTCCTCTCTCGAATTCTTTGAACTAGGGAAGAACAATATCGAAGGAAGCATCCCAACTTGGCTGGGAAACCTCTCATCATTACTTACTGTGAAACTTGGAGGCAATAGACTAGATGGGAACATCCCTGAATCACTGGGGAAACTGAAGTTGCTTACATCTCTTGATCTATCAAGTAATAATCTAGTGGGCCCAGTACCTGATACTATTGGAAACCTATATTCCATTAAGCAGTTTCATGTAGAAAATAATGAGCTAGAAGGTTCTTTACCTTCTTCAATATTCAATCTTTCCTCTCTTGAAGAACTCAACTTACAAACCAACAACCTAAATGGGACCATTCCACTTGACTTAGGCAACCGCCTGCCAAAGCTCCAGTTATTCCTAATATCTGAAAACCAGTTTCATGGCTCAATTCCACCCTCCCTGTGCAATATTTCTACGCTTAGATGGATCCAAACAGTAAACAATTCTTTGTCAGGAACCATCCCCCAATGCATAGGAAAGAAGTACCGCATGATTTATTTCTTTTAA
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| Protein seq | MVLIHHTHDHELLLLAIIIFLSCSNNGHASPASPSSSTTTNVTDRLALMSFRSLIRSDPTQALASWGNQSIPMCQWRGVACGLSGRRTGRVVALDLTKLNLVGAISPLLGNLTYLRRLHLHKNRLHGEIPSELGHLRDLRHLNLSYNSIQGPIPATLSTCRGMENIWLYSNKLQGQIPSEFGSLQNLQALVLGENRLTGSIPSFIGSLANLKFLILEENNFTGEIPSDISRLANLTVLGLGSNQLSGPIPASIGNLSALQFLSVFSNNLVGSIPPMQRLSSLEFFELGKNNIEGSIPTWLGNLSSLLTVKLGGNRLDGNIPESLGKLKLLTSLDLSSNNLVGPVPDTIGNLYSIKQFHVENNELEGSLPSSIFNLSSLEELNLQTNNLNGTIPLDLGNRLPKLQLFLISENQFHGSIPPSLCNISTLRWIQTVNNSLSGTIPQCIGKKYRMIYFF
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.252032 | 0.000000 | 6.477416 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0215500 | RBH | 0.000000 | 0.000000 | 0.158725 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g12400 | RBH | 0.000000 | 0.084031 | 0.459519 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0215500 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0008820 | RBH | 0.251154 | 5.942551 | 2.632326 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0025040 | SBH | 0.095130 | 0.000000 | 0.117828 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0020730 | SBH | 0.119523 | 0.974873 | 2.135322 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0008360 | SBH | 0.0 | 0.011065 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0008760 | SBH | 0.130144 | 0.000000 | 1.292085 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0108200 | RBH | 1.2681925 | 5.597486 | 11.5323785 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0008590 | SBH | 0.047226 | 0.052366 | 0.060355 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0112300 | RBH | 1.4846935 | 6.0906705 | 9.196857 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0009010 | SBH | 0.000000 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0003980 | SBH | 0.070042 | 4.234505 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0004260 | SBH | 3.191976 | 29.049385 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0004210 | SBH | 0.087713 | 0.227309 | 0.100002 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0004290 | SBH | 0.032945 | 0.534010 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G024900 | RBH | 0.199466 | 0.184480 | 0.440630 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0004010 | RBH | 0.630622 | 3.130005 | 0.941510 |
