Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os10g02990 | OGI:10005230 | 4/16 | Nipponbare | IRGSP 1.0 | MSU | Chr10:1243478-1245660 | ||||||||
| Gene Symbol | RLCK288, OsRLCK288 | ||||||||||
| DNA seq | CTATGTATTTCTTAGTTGTTCTAGTGTAACTTCATTGAAACGTATAGGGCATGAGCTAGAGGAATGCTGCTGAATGAGAGTCTGGTATGCCTCCATCATTGTTGGCCTTGCATGAGGAGAAGCTTCCAGGCAAGAAATGGCCACCTTGATGAGAATTTCTATGCTTTCCTCTTCTGCTGTTGTGGGTGCTGTAGGCCGTTCATCCAATATTTCTTTGACCAATGTATGTTGCTGTTCTGATGACAAAAGAGTTTGCAACAATTCCATAGGATGCTTCCCCATTACCACCTCTAGAACAACAACACCAAAGCTATAAACATCACATTTCTCTGTCACGACACATGTGAAGGACAGTTCTGCACCAAGAAAAGAACAGACAAGAATGAAATAAGTAATAATCATTGAGAAAACTGCACTTTAGGTATTACTCAAATTTTACAGAACATACCAGGAGCTATGTAGCCATATGTCCCCGCTAATGCACTCCAGTTTGATGAATCCGGCTTCAAAATCCTTGCCGTGCCAAAATCCGAGACATAAGCCTTGAAAGCTGTATCAAGTAGGATGTTGTTACTTGTGATATCTCGATGTATTATGGGTGGACTGCAGTCATGGTGCAAATAAGATAGAGCTTGAGCCACATCTTTTACAAGAGTAACTCTCTTAGACCAATCCAGTTCTTTTGCTAGCTCCTCATTTTTTAAGGTCATATAGAGGCTTCCCCGTTGAATGTAGTCATAGACAAGAAAGTTGTAGTTCGGATGGAAGCAGAATCCATACAGTTTGACATTGCTTCTATGACGGATTTGTGACAAGACTTAAAGTCTTGTTTCATCATTTAACTCTTCTTCAACTGGATGAAGCTTCTCGACAATGACTACATTCCCGTCTTGGAGTCGTGCTTTGTAGACCTTGCCAGATCCTCCTATTCCAACGATGTGCTTATCATTGAAGTTTTCGGTTGCCCTGATGATATCCTCAAATGCTAGTCTGCCATCGAAGTTCTAGACAGAAAACATGTTCCTTGCAACAGTAATAGCACTAGCGCTTTGCTGTTGTTTTCTCTTGTTATGAACAAGCTTTGTGATGACAATAATTGTAGCCAGAATGACAATGACCACAACAAGAACAATTGGCAGTAGCAAACTTAGTAGCTTTGGCTTATGGTGACCAGATGCTATAACTGAATAACAAGTTGGCAGGCCAGAGAGATTACCACACAAACCTTTATTGTGAATAAACCAGCTTATTGATGCATTTTGAAGTAGATGTCCTGCAGGGAGAGGTCCTTCCAAGTTGTTGTAGGACACATCAAGAACTGTTAAGCTCAACATGCTAGCGATGGATGATGGAAGACTTCCTCTGAACTGGTTGTGAGACAAATTAAGAATCTCTAACATCTGCAAGGTTCCAAGTTGTTGTGGCAACAAACCATCGAGTTTGTTGTTACTAGCATCCAATATGATTTGCAGGCCTTTCAAATTTCCAATTGTGCCTGGCAAATTCCCATGTATATTGTTATTGTTAATCTTCAAAGATTCTAACCTGATGCAGTCCCCTAGTTCATCAGGTATTGGTCCACTCAAATTGTTTCTTGATACATCAAGGTACCCTAAATTGCTTAGCTTTCCTAGCTGTGCTGGTAAAGATCCTGAGAGCTGATTGAATGATAAATTTAGCTTATATAGGCTTTTCAGATTTCCAAATTCTGCTGGAATCTCACCACTGATATTATTAAGATCAAGTCTGAGCACACCTAGGTTGGACAACTTAGAGAGAGCAGGAGGTAACACACCTGTGATCATGTTTCCTTGAAAATACATTTCCTCAAGCTGGGGGCTAGCAACCCAATTTGGTGTGATCTGCCCAGAGAACCTATTGTATGCCAAGCTGACCGTTTTGAGATGTGGATACACACCAAAATGTTCAGATATGTCTCCCGTAAGCTGGTTTTTGTGCACGGCAATTCTAACCAAACTTGTACATGTCTTTAAGCTTCTCGGAATGGGGCCATCGAAGGTATTCACACTAACCATGAAAGTTTTGAGTCTGCCCCCCATGCATACATATGCAGGCAAGTGTCCTGAAAATTGGTTATTATCAAGCCAAAGGTCTGGTATGCCCGTGAGATTTTCGAATTCCCGAGGAAGAGAACCTGTTAATCGGTTATGAAACATGGTCAT
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| CDS seq | ATGACCATGTTTCATAACCGATTAACAGGTTCTCTTCCTCGGGAATTCGAAAATCTCACGGGCATACCAGACCTTTGGCTTGATAATAACCAATTTTCAGGACACTTGCCTGCATATGTATGCATGGGGGGCAGACTCAAAACTTTCATGGTTAGTGTGAATACCTTCGATGGCCCCATTCCGAGAAGCTTAAAGACATGTACAAGTTTGGTTAGAATTGCCGTGCACAAAAACCAGCTTACGGGAGACATATCTGAACATTTTGGTGTGTATCCACATCTCAAAACGGTCAGCTTGGCATACAATAGGTTCTCTGGGCAGATCACACCAAATTGGGTTGCTAGCCCCCAGCTTGAGGAAATGTATTTTCAAGGAAACATGATCACAGGTGTGTTACCTCCTGCTCTCTCTAAGTTGTCCAACCTAGGTGTGCTCAGACTTGATCTTAATAATATCAGTGGTGAGATTCCAGCAGAATTTGGAAATCTGAAAAGCCTATATAAGCTAAATTTATCATTCAATCAGCTCTCAGGATCTTTACCAGCACAGCTAGGAAAGCTAAGCAATTTAGGGTACCTTGATGTATCAAGAAACAATTTGAGTGGACCAATACCTGATGAACTAGGGGACTGCATCAGGTTAGAATCTTTGAAGATTAACAATAACAATATACATGGGAATTTGCCAGGCACAATTGGAAATTTGAAAGGCCTGCAAATCATATTGGATGCTAGTAACAACAAACTCGATGGTTTGTTGCCACAACAACTTGGAACCTTGCAGATGTTAGAGATTCTTAATTTGTCTCACAACCAGTTCAGAGGAAGTCTTCCATCATCCATCGCTAGCATGTTGAGCTTAACAGTTCTTGATGTGTCCTACAACAACTTGGAAGGACCTCTCCCTGCAGGACATCTACTTCAAAATGCATCAATAAGCTGGTTTATTCACAATAAAGTTATAGCATCTGGTCACCATAAGCCAAAGCTACTAAGTTTGCTACTGCCAATTGTTCTTGTTGTGAACTTCGATGGCAGACTAGCATTTGAGGATATCATCAGGGCAACCGAAAACTTCAATGATAAGCACATCGTTGGAATAGGAGGATCTGGCAAGGTCTACAAAGCACGACTCCAAGACGGGAATGTAGTCATTGTCGAGAAGCTTCATCCAGTTGAAGAAGAAAGCAATGTCAAACTGTATGGATTCTGCTTCCATCCGAACTACAACTTTCTTGTCTATGACTACATTCAACGGGGAAGCCTCTATATGACCTTAAAAAATGAGGAGCTAGCAAAAGAACTGGATTGGTCTAAGAGAGTTACTCTTGTAAAAGATGTGGCTCAAGCTCTATCTTATTTGCACCATGACTGCAGTCCACCCATAATACATCGAGATATCACAAGTAACAACATCCTACTTGATACAGCTTTCAAGGCTTATGTCTCGGATTTTGGCACGGCAAGGATTTTGAAGCCGGATTCATCAAACTGGAGTGCATTAGCGGGGACATATGGCTACATAGCTCCTGAACTGTCCTTCACATGTGTCGTGACAGAGAAATGTGATGTTTATAGCTTTGGTGTTGTTGTTCTAGAGGTGGTAATGGGGAAGCATCCTATGGAATTGTTGCAAACTCTTTTGTCATCAGAACAGCAACATACATTGGTCAAAGAAATATTGGATGAACGGCCTACAGCACCCACAACAGCAGAAGAGGAAAGCATAGAAATTCTCATCAAGGTGGCCATTTCTTGCCTGGAAGCTTCTCCTCATGCAAGGCCAACAATGATGGAGGCATACCAGACTCTCATTCAGCAGCATTCCTCTAGCTCATGCCCTATACGTTTCAATGAAGTTACACTAGAACAACTAAGAAATACATAG
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| Protein seq | MTMFHNRLTGSLPREFENLTGIPDLWLDNNQFSGHLPAYVCMGGRLKTFMVSVNTFDGPIPRSLKTCTSLVRIAVHKNQLTGDISEHFGVYPHLKTVSLAYNRFSGQITPNWVASPQLEEMYFQGNMITGVLPPALSKLSNLGVLRLDLNNISGEIPAEFGNLKSLYKLNLSFNQLSGSLPAQLGKLSNLGYLDVSRNNLSGPIPDELGDCIRLESLKINNNNIHGNLPGTIGNLKGLQIILDASNNKLDGLLPQQLGTLQMLEILNLSHNQFRGSLPSSIASMLSLTVLDVSYNNLEGPLPAGHLLQNASISWFIHNKVIASGHHKPKLLSLLLPIVLVVNFDGRLAFEDIIRATENFNDKHIVGIGGSGKVYKARLQDGNVVIVEKLHPVEEESNVKLYGFCFHPNYNFLVYDYIQRGSLYMTLKNEELAKELDWSKRVTLVKDVAQALSYLHHDCSPPIIHRDITSNNILLDTAFKAYVSDFGTARILKPDSSNWSALAGTYGYIAPELSFTCVVTEKCDVYSFGVVVLEVVMGKHPMELLQTLLSSEQQHTLVKEILDERPTAPTTAEEESIEILIKVAISCLEASPHARPTMMEAYQTLIQQHSSSSCPIRFNEVTLEQLRNT |
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| Function | MDIS1-interacting receptor like kinase 2 [UniProtKB/Swiss-Prot:Q8VZG8] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os10g02990 | LOC_Os10g02990.1 | Chr10 | 1243478 | 1245660 | - | MSU_osa1r7 | ||
| CDS seq | ATGACCATGTTTCATAACCGATTAACAGGTTCTCTTCCTCGGGAATTCGAAAATCTCACGGGCATACCAGACCTTTGGCTTGATAATAACCAATTTTCAGGACACTTGCCTGCATATGTATGCATGGGGGGCAGACTCAAAACTTTCATGGTTAGTGTGAATACCTTCGATGGCCCCATTCCGAGAAGCTTAAAGACATGTACAAGTTTGGTTAGAATTGCCGTGCACAAAAACCAGCTTACGGGAGACATATCTGAACATTTTGGTGTGTATCCACATCTCAAAACGGTCAGCTTGGCATACAATAGGTTCTCTGGGCAGATCACACCAAATTGGGTTGCTAGCCCCCAGCTTGAGGAAATGTATTTTCAAGGAAACATGATCACAGGTGTGTTACCTCCTGCTCTCTCTAAGTTGTCCAACCTAGGTGTGCTCAGACTTGATCTTAATAATATCAGTGGTGAGATTCCAGCAGAATTTGGAAATCTGAAAAGCCTATATAAGCTAAATTTATCATTCAATCAGCTCTCAGGATCTTTACCAGCACAGCTAGGAAAGCTAAGCAATTTAGGGTACCTTGATGTATCAAGAAACAATTTGAGTGGACCAATACCTGATGAACTAGGGGACTGCATCAGGTTAGAATCTTTGAAGATTAACAATAACAATATACATGGGAATTTGCCAGGCACAATTGGAAATTTGAAAGGCCTGCAAATCATATTGGATGCTAGTAACAACAAACTCGATGGTTTGTTGCCACAACAACTTGGAACCTTGCAGATGTTAGAGATTCTTAATTTGTCTCACAACCAGTTCAGAGGAAGTCTTCCATCATCCATCGCTAGCATGTTGAGCTTAACAGTTCTTGATGTGTCCTACAACAACTTGGAAGGACCTCTCCCTGCAGGACATCTACTTCAAAATGCATCAATAAGCTGGTTTATTCACAATAAAGTTATAGCATCTGGTCACCATAAGCCAAAGCTACTAAGTTTGCTACTGCCAATTGTTCTTGTTGTGAACTTCGATGGCAGACTAGCATTTGAGGATATCATCAGGGCAACCGAAAACTTCAATGATAAGCACATCGTTGGAATAGGAGGATCTGGCAAGGTCTACAAAGCACGACTCCAAGACGGGAATGTAGTCATTGTCGAGAAGCTTCATCCAGTTGAAGAAGAAAGCAATGTCAAACTGTATGGATTCTGCTTCCATCCGAACTACAACTTTCTTGTCTATGACTACATTCAACGGGGAAGCCTCTATATGACCTTAAAAAATGAGGAGCTAGCAAAAGAACTGGATTGGTCTAAGAGAGTTACTCTTGTAAAAGATGTGGCTCAAGCTCTATCTTATTTGCACCATGACTGCAGTCCACCCATAATACATCGAGATATCACAAGTAACAACATCCTACTTGATACAGCTTTCAAGGCTTATGTCTCGGATTTTGGCACGGCAAGGATTTTGAAGCCGGATTCATCAAACTGGAGTGCATTAGCGGGGACATATGGCTACATAGCTCCTGAACTGTCCTTCACATGTGTCGTGACAGAGAAATGTGATGTTTATAGCTTTGGTGTTGTTGTTCTAGAGGTGGTAATGGGGAAGCATCCTATGGAATTGTTGCAAACTCTTTTGTCATCAGAACAGCAACATACATTGGTCAAAGAAATATTGGATGAACGGCCTACAGCACCCACAACAGCAGAAGAGGAAAGCATAGAAATTCTCATCAAGGTGGCCATTTCTTGCCTGGAAGCTTCTCCTCATGCAAGGCCAACAATGATGGAGGCATACCAGACTCTCATTCAGCAGCATTCCTCTAGCTCATGCCCTATACGTTTCAATGAAGTTACACTAGAACAACTAAGAAATACATAG
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| Protein seq | MTMFHNRLTGSLPREFENLTGIPDLWLDNNQFSGHLPAYVCMGGRLKTFMVSVNTFDGPIPRSLKTCTSLVRIAVHKNQLTGDISEHFGVYPHLKTVSLAYNRFSGQITPNWVASPQLEEMYFQGNMITGVLPPALSKLSNLGVLRLDLNNISGEIPAEFGNLKSLYKLNLSFNQLSGSLPAQLGKLSNLGYLDVSRNNLSGPIPDELGDCIRLESLKINNNNIHGNLPGTIGNLKGLQIILDASNNKLDGLLPQQLGTLQMLEILNLSHNQFRGSLPSSIASMLSLTVLDVSYNNLEGPLPAGHLLQNASISWFIHNKVIASGHHKPKLLSLLLPIVLVVNFDGRLAFEDIIRATENFNDKHIVGIGGSGKVYKARLQDGNVVIVEKLHPVEEESNVKLYGFCFHPNYNFLVYDYIQRGSLYMTLKNEELAKELDWSKRVTLVKDVAQALSYLHHDCSPPIIHRDITSNNILLDTAFKAYVSDFGTARILKPDSSNWSALAGTYGYIAPELSFTCVVTEKCDVYSFGVVVLEVVMGKHPMELLQTLLSSEQQHTLVKEILDERPTAPTTAEEESIEILIKVAISCLEASPHARPTMMEAYQTLIQQHSSSSCPIRFNEVTLEQLRNT
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.000000 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0114400 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | Os10g0119200 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0017830 | SBH | 0.128877 | 6.788608 | 1.696541 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0000680 | SBH | 0.0 | 6.464419 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0004950 | SBH | 0.351912 | 0.244407 | 1.702016 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0001040 | SBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0023700 | RBH | 0.271775 | 0.0014645 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0004810 | SBH | 0.297846 | 0.021683 | 0.170285 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0027200 | RBH | 1.6561035 | 0 | 0.0044625 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0000650 | SBH | 0.0 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0000690 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0004260 | SBH | 3.191976 | 29.049385 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0000640 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0000630 | SBH | 0.000000 | 4.420125 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G000971 | RBH | 1.907058 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0000570 | SBH | 0.0 | 0.000000 | 0.000000 |
