Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_10G0023700 | OGI:10005230 | 4/16 | Minghui 63 | MH63RS3 | HZAU | Chr10:1685757-1686722 | ||||||||
| Gene Symbol | RLCK288, OsRLCK288 | ||||||||||
| DNA seq | CTATGCTTTCCTCTTCTGTTGTTGTGGGTGCTGTAGGCCGTTCATCCAATATTTCTTTGACCAATGTATGTTACTGTTCAAAGATTCTAACCTGATGCAGTCCCCTAGTTCATCGGGTATTGGTCCACTCAAATTGTTTCTTGATACATCAAGGTACCCTAAATTGCTTAACTTTCCTAGCTGTGCTGGTAAATATCCTGAGAGCTGATTGAATGATAAATTTATCTTATATAGGCTTTTCAGATTTCCAAATTCTGCTGGAATCTCACCACTGATATTATTATGATCAAGTCTGAGTAAACCTAGGTTGGACAACTTAGAGAGAGCAGGAGGTAACACACCTGTGATCATGTTTTTGTGAAAATCCATTTCCTCAAGCTGGGGACTAGCAACCCAATTTGGTGAGATCTGCCCAAAGAACCTATTGTATGACAAGCTGACCGATTTGAGATGCGGATACACTCCAAAATGTTCAGATATGTCTCCCGTAAGCAGGTTATTGTACACGGAAAGTTTAACCAAGCTTGTACATGTCTTCAAGCTTCTCGGAATGGGGCCATCGAAGGCATTCCCACCAATCATGAAAGTTTTGAGTCTGCCACCCATGCATACATTTGCAGGCAAATGTCCTGAAAATGAGTTATTATCAAGCCAAAGGTCTGCTATGCCCGTGAGATTTTCGAATTCCCGAGGAAGAGAACCTGTTAATTGGTTATGAACCATGGCCATCAGTTGAATGCTCACCAAGTTACCGAAAGTTTTTGGTACTAAGCCAGAAATTTGATTATATCCAAAATTCAAAATATTGAGGTTCACCAAATTTCCGATTTCTTGTGGGGTGGAGCCAGATATCCGATTTTCTTGGAGGGATAGTGTCACCAGCTTGGTAAGGTTTCCTAAGCTAGCAGGAAGTTCACCAGTAAGTTTGTTACTGCTAAGATCAAGATATTGTATCTTGGTGAGCAT
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| CDS seq | ATGCTCACCAAGATACAATATCTTGATCTTAGCAGTAACAAACTTACTGGTGAACTTCCTGCTAGCTTAGGAAACCTTACCAAGCTGGTGACACTATCCCTCCAAGAAAATCGGATATCTGGCTCCACCCCACAAGAAATCGGAAATTTGGTGAACCTCAATATTTTGAATTTTGGATATAATCAAATTTCTGGCTTAGTACCAAAAACTTTCGGTAACTTGGTGAGCATTCAACTGATGGCCATGGTTCATAACCAATTAACAGGTTCTCTTCCTCGGGAATTCGAAAATCTCACGGGCATAGCAGACCTTTGGCTTGATAATAACTCATTTTCAGGACATTTGCCTGCAAATGTATGCATGGGTGGCAGACTCAAAACTTTCATGATTGGTGGGAATGCCTTCGATGGCCCCATTCCGAGAAGCTTGAAGACATGTACAAGCTTGGTTAAACTTTCCGTGTACAATAACCTGCTTACGGGAGACATATCTGAACATTTTGGAGTGTATCCGCATCTCAAATCGGTCAGCTTGTCATACAATAGGTTCTTTGGGCAGATCTCACCAAATTGGGTTGCTAGTCCCCAGCTTGAGGAAATGGATTTTCACAAAAACATGATCACAGGTGTGTTACCTCCTGCTCTCTCTAAGTTGTCCAACCTAGGTTTACTCAGACTTGATCATAATAATATCAGTGGTGAGATTCCAGCAGAATTTGGAAATCTGAAAAGCCTATATAAGATAAATTTATCATTCAATCAGCTCTCAGGATATTTACCAGCACAGCTAGGAAAGTTAAGCAATTTAGGGTACCTTGATGTATCAAGAAACAATTTGAGTGGACCAATACCCGATGAACTAGGGGACTGCATCAGGTTAGAATCTTTGAACAGTAACATACATTGGTCAAAGAAATATTGGATGAACGGCCTACAGCACCCACAACAACAGAAGAGGAAAGCATAG
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| Protein seq | MLTKIQYLDLSSNKLTGELPASLGNLTKLVTLSLQENRISGSTPQEIGNLVNLNILNFGYNQISGLVPKTFGNLVSIQLMAMVHNQLTGSLPREFENLTGIADLWLDNNSFSGHLPANVCMGGRLKTFMIGGNAFDGPIPRSLKTCTSLVKLSVYNNLLTGDISEHFGVYPHLKSVSLSYNRFFGQISPNWVASPQLEEMDFHKNMITGVLPPALSKLSNLGLLRLDHNNISGEIPAEFGNLKSLYKINLSFNQLSGYLPAQLGKLSNLGYLDVSRNNLSGPIPDELGDCIRLESLNSNIHWSKKYWMNGLQHPQQQKRKA |
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| Function | MDIS1-interacting receptor like kinase 2 [UniProtKB/Swiss-Prot:Q8VZG8] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_10G0023700 | OsMH63_10T0023700.1 | Chr10 | 1685757 | 1686722 | - | maker | ||
| CDS seq | ATGCTCACCAAGATACAATATCTTGATCTTAGCAGTAACAAACTTACTGGTGAACTTCCTGCTAGCTTAGGAAACCTTACCAAGCTGGTGACACTATCCCTCCAAGAAAATCGGATATCTGGCTCCACCCCACAAGAAATCGGAAATTTGGTGAACCTCAATATTTTGAATTTTGGATATAATCAAATTTCTGGCTTAGTACCAAAAACTTTCGGTAACTTGGTGAGCATTCAACTGATGGCCATGGTTCATAACCAATTAACAGGTTCTCTTCCTCGGGAATTCGAAAATCTCACGGGCATAGCAGACCTTTGGCTTGATAATAACTCATTTTCAGGACATTTGCCTGCAAATGTATGCATGGGTGGCAGACTCAAAACTTTCATGATTGGTGGGAATGCCTTCGATGGCCCCATTCCGAGAAGCTTGAAGACATGTACAAGCTTGGTTAAACTTTCCGTGTACAATAACCTGCTTACGGGAGACATATCTGAACATTTTGGAGTGTATCCGCATCTCAAATCGGTCAGCTTGTCATACAATAGGTTCTTTGGGCAGATCTCACCAAATTGGGTTGCTAGTCCCCAGCTTGAGGAAATGGATTTTCACAAAAACATGATCACAGGTGTGTTACCTCCTGCTCTCTCTAAGTTGTCCAACCTAGGTTTACTCAGACTTGATCATAATAATATCAGTGGTGAGATTCCAGCAGAATTTGGAAATCTGAAAAGCCTATATAAGATAAATTTATCATTCAATCAGCTCTCAGGATATTTACCAGCACAGCTAGGAAAGTTAAGCAATTTAGGGTACCTTGATGTATCAAGAAACAATTTGAGTGGACCAATACCCGATGAACTAGGGGACTGCATCAGGTTAGAATCTTTGAACAGTAACATACATTGGTCAAAGAAATATTGGATGAACGGCCTACAGCACCCACAACAACAGAAGAGGAAAGCATAG
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| Protein seq | MLTKIQYLDLSSNKLTGELPASLGNLTKLVTLSLQENRISGSTPQEIGNLVNLNILNFGYNQISGLVPKTFGNLVSIQLMAMVHNQLTGSLPREFENLTGIADLWLDNNSFSGHLPANVCMGGRLKTFMIGGNAFDGPIPRSLKTCTSLVKLSVYNNLLTGDISEHFGVYPHLKSVSLSYNRFFGQISPNWVASPQLEEMDFHKNMITGVLPPALSKLSNLGLLRLDHNNISGEIPAEFGNLKSLYKINLSFNQLSGYLPAQLGKLSNLGYLDVSRNNLSGPIPDELGDCIRLESLNSNIHWSKKYWMNGLQHPQQQKRKA
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.271775 | 0.0014645 | 0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0120300 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g02990 | RBH | 0.000000 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os10g0119200 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0000690 | SBH | 0.0 | 7.051491 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0000680 | SBH | 0.0 | 6.464419 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0000680 | SBH | 0.0 | 13.021489 | 0.280552 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0000630 | SBH | 0.021345 | 0.250575 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0000610 | SBH | 0.0 | 2.067719 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0060800 | SBH | 0.474298 | 2.2382225 | 1.5154645 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0003110 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0027000 | SBH | 0.316624 | 0.444251 | 2.189687 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0002920 | SBH | 0.0 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0000690 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0003020 | SBH | 0.0 | 3.263379 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0000640 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0000630 | SBH | 0.000000 | 4.420125 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G000971 | RBH | 1.907058 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0000570 | SBH | 0.0 | 0.000000 | 0.000000 |
