Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| Os10g0119200 | OGI:10005240 | 3/16 | Nipponbare | IRGSP 1.0 | RAP-db | Chr10:1223357-1227190 | ||||||||
| Gene Symbol | LRR-RLK2, OsLRR-RLK2, RLCK288, OsRLCK288 | ||||||||||
| DNA seq | TGAACGGTGCTTGTCGGAATGAGTCACAAATTGAGTACTGTACAATAGTCACTGAATCGTTCATTTTACCTTTTGACTGTTGTAGCATAACATAAGTCATCTAATTCTTTACCTTGACTTTTGTGCAAACATAGTCAATTTTGGACATATTTGCCAATTTAAAATAGAGTTCATGCAAGTATTTATTCAGTGCTGTTATGAATGGGCTTTGTTGGTACTGCAATATATGATTTTGAATTTACTAAAACTTTGATACTACTTATGAGAATGAATTGGGAAAGTAATCCTTAATACCTAGTTGCTTATGAATCCCATAGCTCATCCAATATAACTCGACTGCAATTTTTGGATAGAAAACTAGAAGTCTGATAATCAATTAGTGTCTGGTAGACCTCCTGCATTGTTGGTCTTGCTTGCGGAGAAGCTTTCAAGCAAGAAAACACCACCTTAATGAGGGAAACTATGTTTTCTTCTTCTGTCGTTGTTGGTGCTAAAGGTCGTGAATCCAGGATTTCCTTGATTGTTATATTGTGATCCCTTGATGAAGTCAGATGCTGCAATAAATCTCTTGGGTGCTTCCCAATCACTACCTCTAGCATAACCATGCCGAAACTATACACATCACATTTCTCTGTCACCAAAGATGTATAGGACAGCTCTACACAAGGAGAGAACACATATTAGTAATCAATGATTAGATATCAAAGCTTTTTGTATAAGAAAGTATATACCAGGAGCTATGTAGCCATATGTACCAGCTAGCGCACTCCAATTAGATGAATCAGGTCTCAAAATCCTCGCTGTACCAAAATCTGAGACATAAGCCTTCAAAGTTGTATCAAGTAAGATGTTGTTGCTGGTTATATCTCGATGAATTATTGGTGGATTGCAGTCGTGGTGCAGATAACATAGTGCTTGAGCTACATCCTTTATAAGAATATTCCTCTTTTGCCAATCTAATGCCTTAGCTAACTCATCATCAGCTAAGGTCATATGGAGGCTTCCCTGCTCTATGTATTCATAGACAAGAAACCTGTACTCTGGATGGGAGCAGAATCCATACAGTTTGACAATGCTTCGTTGTCGGATTTGTGTTAAGATTTCCATTTCACATGAAAATCTTTTTTCATCACCCAACCCTTCTTCAGTTGTGTGAAGCTTCTTCACAGCAACTACCTGCCCGTCCTGGAGTTGTGCTCGATAGACCTTGCCATAACCTCCCGCTCCAATGATGTACTTGTCATCGAAATCTTCTGTTGCCCTGACAATATCCTCAAATGCTAATCTTCCATCAAAATTCCAAACAGAGAACATGTCCCTTCCTTTGGCTGTAGTACTTTCTTGTGGTTTTCTCTTGTTATGAATAAACACCGTTCCGAGAACAACTGTAGCAAGAATGGCAAAACCCAGAACAAGAACAACCGGCAACAGAAAACGAAATAGCTTTCTTTTGTTGTGACCAGGTGCTGAGTAACAAGACGGCAGGCCAGAGAGATTACCGCATAGACCTTTATTGTTGAGAAACCAGCTTGCTGAAGCATTTTGAAATAGTCGCCCTGCTGGTAGTGGTCCTTCTAAGTTATTGTATGACGCATCAAGTGTTGATAGGCTCACCATGCTTGCAAAGGAAGTCGGAATTCTTCCAGTGAACTGGTTGTGAGATAAATTTAGAAATACCAGCATCTGCATCCTTCCAAAGTCTTGCGGCAACAAACCATCAAGTTTGTTATTGCTAACATCTAGCATGATTTGTATGCTTGCTAAATTTCCAATTGTGGCAGGCAAATTCCCACTGAAGTGGTTGTTGTTGATCCTCAGTAACTGTAGTTTGGTGCATCTCCCAAGTTCCTCAGGTATTGGTCCACTCAAACTATTTCTGGAAACATCAAGGTATTCTAAATCTCTCAGGTTTCCCAACTGCGAAGGTATGGATCCTGATAACTTATTGAACGACAAATTCAGACTATATAGATTTATTAAATTCCCTATTTCTGGTGGAATCACACCATTTACATGATTAGAACTGAGTTTTAGTTCAACTAGGTTGGGCAATTTAGACAGAGCTGGAGGTATTGTGCCTGTGATCATATTTTCTGCTATATTTAGAATAGCTAATTCTGGACAAGCACCCCACTTTGGTGAAATCTGCCCAGAGAGCCTATTGGACATCAAGCTCATCTTTTTGAGTTTTGGATACACACCAAAATGTTTGGATATATCTCCCGTTAACTGGTTGCCATCAAGGAAAAGTCGAACCAACGATGTGCACGTCTTCAAGCTCCTCGGAACAGGGCCATTGAACATATTTAAAGACAGAAATAAAAGTTTGAGGCTTGTGCCAGCACATATATTTGCTGGCAACTGCCCTGAAAGGGAGTTACTTGCTAGGTCTAGCTCAACCATGTTTGTGATATTTCCAAATTCCTGAGGAAGAGAATTCGACAATTGGTTACTACGAAAATTCAGATTTTGCATGTTTTGAAAGTTCCCTAAAGATTTCGGTATTGAGCCGGAAATTTGATTCTCTTCCAAAGACAAAAGTTGAAGGTTCACTAGGTTGCCGAACTCCTGGGGGATAGAGCCATTTATCTGATTTTTACTGAGGTCCAGTGCAATTAGCTTGGTAAGGTTCGCTAAGGTGCCAGGTATAGAGCCAGAGATTTGATTGCTGTGCAGGATTAAGTTCTGGAGATTTGATATGATCCCTAGTCCTGGGGGTATTGAACCAGTAATTTGGTTTTCATGGAGGAAAAGATTGTTCAGCATAGTGAGGTTGCCTAGTTCTGTGGGTAAGGAACCTTTTAATTTATTTTCATTGAGAACAAGATCGGTGAGCATGGCGAGATTGCCTATTTCAGGGGGAATGGAACCAATTATTTGGTTTCTAAAGAGATAGAGTTTGATCATCTTAGTGAGATTGCCTATACATGTGGGGATTTCACCAGTAAGTTTGTTATCACCAAGAGCAAGATATTGCAAGTTGGTCAGCTTGCAGAGTTTTGGTGGTACAGGCCCTGACAGTTCATTACCATCTAGATAGAAAGTATCTAGGTTGGTCAGATTTGCTAGAGTTGTTGGTATCTCGCCGCTCAACGTGTTGTTGCTCAGCTGCAAAAGCTGCAGGTTGGCAAGCATTCCTATCTCCTTTGGGATGGGACCAGAGACCATATTTCGGTGAATGGAGAGCTCGGTGATCATCGTCAGGTTACCCACGGATGCAGGGATGTGGCCTGTGAGGTTGTTGTACGAAAGATCAAGCATGGTGAGCCTCTGAAGCTCACTGATCTCATCCGGCATTCTTCCTGTGAGCTGGTTGAGTTGAAGGTCAAGGTAGGTGAGTGCTGATAGAGAGCTGATACTTGAGGGTATTGGGCCATAGACACTGTTGCTGCTGAGATCAATATATGTGAGGAAGGGAAGAGATGAGAAGTTGAGCTCACCAAGCTGGCCATGGATGCCGGCATCTGGCAAGGAGATGTTGGTGATGACCCAGGACATAGCTTGATGTGCAGCTCTGCATGTGATTCCGGTCCAGTTGCAGGGGCTTGTGCTGGCCTGCCAAGAGCTCCTCATCTGCGGCCCTGTGCTCTGGAGAGTAGATTTCCAGTGGAGGAGGGCCATCTGCTGAGACCTCAGTGAGATTCCACCATGACGATGCACCGCATGCGCCATCGGTAGAAGAAAACACGGCAGGAGCAGTAGATACAGGCAGAGGAAGGGTGTTGAGGAGGAATGCAGTTTGTAGCACAATATTTCCATTTGGTGCCAACTGCGAAATTTTCAAGAATTTGTTTTGGACTATTGGAGGGAGAGTTGGTTGGGGCAACTATTTTC
More
|
||||||||||
| CDS seq | ATGGAAATATTGTGCTACAAACTGCATTCCTCCTCAACACCCTTCCTCTGCCTGTATCTACTGCTCCTGCCGTGTTTTCTTCTACCGATGGCGCATGCGGTGCATCGTCATGGTGGAATCTCACTGAGGTCTCAGCAGATGGCCCTCCTCCACTGGAAATCTACTCTCCAGAGCACAGGGCCGCAGATGAGGAGCTCTTGGCAGGCCAGCACAAGCCCCTGCAACTGGACCGGAATCACATGCAGAGCTGCACATCAAGCTATGTCCTGGGTCATCACCAACATCTCCTTGCCAGATGCCGGCATCCATGGCCAGCTTGGTGAGCTCAACTTCTCATCTCTTCCCTTCCTCACATATATTGATCTCAGCAGCAACAGTGTCTATGGCCCAATACCCTCAAGTATCAGCTCTCTATCAGCACTCACCTACCTTGACCTTCAACTCAACCAGCTCACAGGAAGAATGCCGGATGAGATCAGTGAGCTTCAGAGGCTCACCATGCTTGATCTTTCGTACAACAACCTCACAGGCCACATCCCTGCATCCGTGGGTAACCTGACGATGATCACCGAGCTCTCCATTCACCGAAATATGGTCTCTGGTCCCATCCCAAAGGAGATAGGAATGCTTGCCAACCTGCAGCTTTTGCAGCTGAGCAACAACACGTTGAGCGGCGAGATACCAACAACTCTAGCAAATCTGACCAACCTAGATACTTTCTATCTAGATGGTAATGAACTGTCAGGGCCTGTACCACCAAAACTCTGCAAGCTGACCAACTTGCAATATCTTGCTCTTGGTGATAACAAACTTACTGGTGAAATCCCCACATGTATAGGCAATCTCACTAAGATGATCAAACTCTATCTCTTTAGAAACCAAATAATTGGTTCCATTCCCCCTGAAATAGGCAATCTCGCCATGCTCACCGATCTTGTTCTCAATGAAAATAAATTAAAAGGTTCCTTACCCACAGAACTAGGCAACCTCACTATGCTGAACAATCTTTTCCTCCATGAAAACCAAATTACTGGTTCAATACCCCCAGGACTAGGGATCATATCAAATCTCCAGAACTTAATCCTGCACAGCAATCAAATCTCTGGCTCTATACCTGGCACCTTAGCGAACCTTACCAAGCTAATTGCACTGGACCTCAGTAAAAATCAGATAAATGGCTCTATCCCCCAGGAGTTCGGCAACCTAGTGAACCTTCAACTTTTGTCTTTGGAAGAGAATCAAATTTCCGGCTCAATACCGAAATCTTTAGGGAACTTTCAAAACATGCAAAATCTGAATTTTCGTAGTAACCAATTGTCGAATTCTCTTCCTCAGGAATTTGGAAATATCACAAACATGGTTGAGCTAGACCTAGCAAGTAACTCCCTTTCAGGGCAGTTGCCAGCAAATATATGTGCTGGCACAAGCCTCAAACTTTTATTTCTGTCTTTAAATATGTTCAATGGCCCTGTTCCGAGGAGCTTGAAGACGTGCACATCGTTGGTTCGACTTTTCCTTGATGGCAACCAGTTAACGGGAGATATATCCAAACATTTTGGTGTGTATCCAAAACTCAAAAAGATGAGCTTGATGTCCAATAGGCTCTCTGGGCAGATTTCACCAAAGTGGGGTGCTTGTCCAGAATTAGCTATTCTAAATATAGCAGAAAATATGATCACAGGCACAATACCTCCAGCTCTGTCTAAATTGCCCAACCTAGTTGAACTAAAACTCAGTTCTAATCATGTAAATGGTGTGATTCCACCAGAAATAGGGAATTTAATAAATCTATATAGTCTGAATTTGTCGTTCAATAAGTTATCAGGATCCATACCTTCGCAGTTGGGAAACCTGAGAGATTTAGAATACCTTGATGTTTCCAGAAATAGTTTGAGTGGACCAATACCTGAGGAACTTGGGAGATGCACCAAACTACAGTTACTGAGGATCAACAACAACCACTTCAGTGGGAATTTGCCTGCCACAATTGGAAATTTAGCAAGCATACAAATCATGCTAGATGTTAGCAATAACAAACTTGATGGTTTGTTGCCGCAAGACTTTGGAAGGATGCAGATGCTGGTATTTCTAAATTTATCTCACAACCAGTTCACTGGAAGAATTCCGACTTCCTTTGCAAGCATGGTGAGCCTATCAACACTTGATGCGTCATACAATAACTTAGAAGGACCACTACCAGCAGGGCGACTATTTCAAAATGCTTCAGCAAGCTGGTTTCTCAACAATAAAGGTCTATGCGGTAATCTCTCTGGCCTGCCGTCTTGTTACTCAGCACCTGGTCACAACAAAAGAAAGCTATTTCGTTTTCTGTTGCCGGTTGTTCTTGTTCTGGGTTTTGCCATTCTTGCTACAGTTGTTCTCGGAACGGTGTTTATTCATAACAAGAGAAAACCACAAGAAAGTACTACAGCCAAAGGAAGGGACATGTTCTCTGTTTGGAATTTTGATGGAAGATTAGCATTTGAGGATATTGTCAGGGCAACAGAAGATTTCGATGACAAGTACATCATTGGAGCGGGAGGTTATGGCAAGGTCTATCGAGCACAACTCCAGGACGGGCAGGTAGTTGCTGTGAAGAAGCTTCACACAACTGAAGAAGGGTTGGGTGATGAAAAAAGATTTTCATGTGAAATGGAAATCTTAACACAAATCCGACAACGAAGCATTGTCAAACTGTATGGATTCTGCTCCCATCCAGAGTACAGGTTTCTTGTCTATGAATACATAGAGCAGGGAAGCCTCCATATGACCTTAGCTGATGATGAGTTAGCTAAGGCATTAGATTGGCAAAAGAGGAATATTCTTATAAAGGATGTAGCTCAAGCACTATGTTATCTGCACCACGACTGCAATCCACCAATAATTCATCGAGATATAACCAGCAACAACATCTTACTTGATACAACTTTGAAGGCTTATGTCTCAGATTTTGGTACAGCGAGGATTTTGAGACCTGATTCATCTAATTGGAGTGCGCTAGCTGGTACATATGGCTACATAGCTCCTGAGCTGTCCTATACATCTTTGGTGACAGAGAAATGTGATGTGTATAGTTTCGGCATGGTTATGCTAGAGGTAGTGATTGGGAAGCACCCAAGAGATTTATTGCAGCATCTGACTTCATCAAGGGATCACAATATAACAATCAAGGAAATCCTGGATTCACGACCTTTAGCACCAACAACGACAGAAGAAGAAAACATAGTTTCCCTCATTAAGGTGGTGTTTTCTTGCTTGAAAGCTTCTCCGCAAGCAAGACCAACAATGCAGGAGGTCTACCAGACACTAATTGATTATCAGACTTCTAGTTTTCTATCCAAAAATTGCAGTCGAGTTATATTGGATGAGCTATGGGATTCATAA
More
|
||||||||||
| Protein seq | MEILCYKLHSSSTPFLCLYLLLLPCFLLPMAHAVHRHGGISLRSQQMALLHWKSTLQSTGPQMRSSWQASTSPCNWTGITCRAAHQAMSWVITNISLPDAGIHGQLGELNFSSLPFLTYIDLSSNSVYGPIPSSISSLSALTYLDLQLNQLTGRMPDEISELQRLTMLDLSYNNLTGHIPASVGNLTMITELSIHRNMVSGPIPKEIGMLANLQLLQLSNNTLSGEIPTTLANLTNLDTFYLDGNELSGPVPPKLCKLTNLQYLALGDNKLTGEIPTCIGNLTKMIKLYLFRNQIIGSIPPEIGNLAMLTDLVLNENKLKGSLPTELGNLTMLNNLFLHENQITGSIPPGLGIISNLQNLILHSNQISGSIPGTLANLTKLIALDLSKNQINGSIPQEFGNLVNLQLLSLEENQISGSIPKSLGNFQNMQNLNFRSNQLSNSLPQEFGNITNMVELDLASNSLSGQLPANICAGTSLKLLFLSLNMFNGPVPRSLKTCTSLVRLFLDGNQLTGDISKHFGVYPKLKKMSLMSNRLSGQISPKWGACPELAILNIAENMITGTIPPALSKLPNLVELKLSSNHVNGVIPPEIGNLINLYSLNLSFNKLSGSIPSQLGNLRDLEYLDVSRNSLSGPIPEELGRCTKLQLLRINNNHFSGNLPATIGNLASIQIMLDVSNNKLDGLLPQDFGRMQMLVFLNLSHNQFTGRIPTSFASMVSLSTLDASYNNLEGPLPAGRLFQNASASWFLNNKGLCGNLSGLPSCYSAPGHNKRKLFRFLLPVVLVLGFAILATVVLGTVFIHNKRKPQESTTAKGRDMFSVWNFDGRLAFEDIVRATEDFDDKYIIGAGGYGKVYRAQLQDGQVVAVKKLHTTEEGLGDEKRFSCEMEILTQIRQRSIVKLYGFCSHPEYRFLVYEYIEQGSLHMTLADDELAKALDWQKRNILIKDVAQALCYLHHDCNPPIIHRDITSNNILLDTTLKAYVSDFGTARILRPDSSNWSALAGTYGYIAPELSYTSLVTEKCDVYSFGMVMLEVVIGKHPRDLLQHLTSSRDHNITIKEILDSRPLAPTTTEEENIVSLIKVVFSCLKASPQARPTMQEVYQTLIDYQTSSFLSKNCSRVILDELWDS |
||||||||||
| Function | Probable leucine-rich repeat receptor-like protein kinase At1g35710 [UniProtKB/Swiss-Prot:Q9LP24] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| Os10g0119200 | Os10t0119200-01 | Chr10 | 1223357 | 1227190 | - | irgsp1_rep | ||
| CDS seq | ATGGAAATATTGTGCTACAAACTGCATTCCTCCTCAACACCCTTCCTCTGCCTGTATCTACTGCTCCTGCCGTGTTTTCTTCTACCGATGGCGCATGCGGTGCATCGTCATGGTGGAATCTCACTGAGGTCTCAGCAGATGGCCCTCCTCCACTGGAAATCTACTCTCCAGAGCACAGGGCCGCAGATGAGGAGCTCTTGGCAGGCCAGCACAAGCCCCTGCAACTGGACCGGAATCACATGCAGAGCTGCACATCAAGCTATGTCCTGGGTCATCACCAACATCTCCTTGCCAGATGCCGGCATCCATGGCCAGCTTGGTGAGCTCAACTTCTCATCTCTTCCCTTCCTCACATATATTGATCTCAGCAGCAACAGTGTCTATGGCCCAATACCCTCAAGTATCAGCTCTCTATCAGCACTCACCTACCTTGACCTTCAACTCAACCAGCTCACAGGAAGAATGCCGGATGAGATCAGTGAGCTTCAGAGGCTCACCATGCTTGATCTTTCGTACAACAACCTCACAGGCCACATCCCTGCATCCGTGGGTAACCTGACGATGATCACCGAGCTCTCCATTCACCGAAATATGGTCTCTGGTCCCATCCCAAAGGAGATAGGAATGCTTGCCAACCTGCAGCTTTTGCAGCTGAGCAACAACACGTTGAGCGGCGAGATACCAACAACTCTAGCAAATCTGACCAACCTAGATACTTTCTATCTAGATGGTAATGAACTGTCAGGGCCTGTACCACCAAAACTCTGCAAGCTGACCAACTTGCAATATCTTGCTCTTGGTGATAACAAACTTACTGGTGAAATCCCCACATGTATAGGCAATCTCACTAAGATGATCAAACTCTATCTCTTTAGAAACCAAATAATTGGTTCCATTCCCCCTGAAATAGGCAATCTCGCCATGCTCACCGATCTTGTTCTCAATGAAAATAAATTAAAAGGTTCCTTACCCACAGAACTAGGCAACCTCACTATGCTGAACAATCTTTTCCTCCATGAAAACCAAATTACTGGTTCAATACCCCCAGGACTAGGGATCATATCAAATCTCCAGAACTTAATCCTGCACAGCAATCAAATCTCTGGCTCTATACCTGGCACCTTAGCGAACCTTACCAAGCTAATTGCACTGGACCTCAGTAAAAATCAGATAAATGGCTCTATCCCCCAGGAGTTCGGCAACCTAGTGAACCTTCAACTTTTGTCTTTGGAAGAGAATCAAATTTCCGGCTCAATACCGAAATCTTTAGGGAACTTTCAAAACATGCAAAATCTGAATTTTCGTAGTAACCAATTGTCGAATTCTCTTCCTCAGGAATTTGGAAATATCACAAACATGGTTGAGCTAGACCTAGCAAGTAACTCCCTTTCAGGGCAGTTGCCAGCAAATATATGTGCTGGCACAAGCCTCAAACTTTTATTTCTGTCTTTAAATATGTTCAATGGCCCTGTTCCGAGGAGCTTGAAGACGTGCACATCGTTGGTTCGACTTTTCCTTGATGGCAACCAGTTAACGGGAGATATATCCAAACATTTTGGTGTGTATCCAAAACTCAAAAAGATGAGCTTGATGTCCAATAGGCTCTCTGGGCAGATTTCACCAAAGTGGGGTGCTTGTCCAGAATTAGCTATTCTAAATATAGCAGAAAATATGATCACAGGCACAATACCTCCAGCTCTGTCTAAATTGCCCAACCTAGTTGAACTAAAACTCAGTTCTAATCATGTAAATGGTGTGATTCCACCAGAAATAGGGAATTTAATAAATCTATATAGTCTGAATTTGTCGTTCAATAAGTTATCAGGATCCATACCTTCGCAGTTGGGAAACCTGAGAGATTTAGAATACCTTGATGTTTCCAGAAATAGTTTGAGTGGACCAATACCTGAGGAACTTGGGAGATGCACCAAACTACAGTTACTGAGGATCAACAACAACCACTTCAGTGGGAATTTGCCTGCCACAATTGGAAATTTAGCAAGCATACAAATCATGCTAGATGTTAGCAATAACAAACTTGATGGTTTGTTGCCGCAAGACTTTGGAAGGATGCAGATGCTGGTATTTCTAAATTTATCTCACAACCAGTTCACTGGAAGAATTCCGACTTCCTTTGCAAGCATGGTGAGCCTATCAACACTTGATGCGTCATACAATAACTTAGAAGGACCACTACCAGCAGGGCGACTATTTCAAAATGCTTCAGCAAGCTGGTTTCTCAACAATAAAGGTCTATGCGGTAATCTCTCTGGCCTGCCGTCTTGTTACTCAGCACCTGGTCACAACAAAAGAAAGCTATTTCGTTTTCTGTTGCCGGTTGTTCTTGTTCTGGGTTTTGCCATTCTTGCTACAGTTGTTCTCGGAACGGTGTTTATTCATAACAAGAGAAAACCACAAGAAAGTACTACAGCCAAAGGAAGGGACATGTTCTCTGTTTGGAATTTTGATGGAAGATTAGCATTTGAGGATATTGTCAGGGCAACAGAAGATTTCGATGACAAGTACATCATTGGAGCGGGAGGTTATGGCAAGGTCTATCGAGCACAACTCCAGGACGGGCAGGTAGTTGCTGTGAAGAAGCTTCACACAACTGAAGAAGGGTTGGGTGATGAAAAAAGATTTTCATGTGAAATGGAAATCTTAACACAAATCCGACAACGAAGCATTGTCAAACTGTATGGATTCTGCTCCCATCCAGAGTACAGGTTTCTTGTCTATGAATACATAGAGCAGGGAAGCCTCCATATGACCTTAGCTGATGATGAGTTAGCTAAGGCATTAGATTGGCAAAAGAGGAATATTCTTATAAAGGATGTAGCTCAAGCACTATGTTATCTGCACCACGACTGCAATCCACCAATAATTCATCGAGATATAACCAGCAACAACATCTTACTTGATACAACTTTGAAGGCTTATGTCTCAGATTTTGGTACAGCGAGGATTTTGAGACCTGATTCATCTAATTGGAGTGCGCTAGCTGGTACATATGGCTACATAGCTCCTGAGCTGTCCTATACATCTTTGGTGACAGAGAAATGTGATGTGTATAGTTTCGGCATGGTTATGCTAGAGGTAGTGATTGGGAAGCACCCAAGAGATTTATTGCAGCATCTGACTTCATCAAGGGATCACAATATAACAATCAAGGAAATCCTGGATTCACGACCTTTAGCACCAACAACGACAGAAGAAGAAAACATAGTTTCCCTCATTAAGGTGGTGTTTTCTTGCTTGAAAGCTTCTCCGCAAGCAAGACCAACAATGCAGGAGGTCTACCAGACACTAATTGATTATCAGACTTCTAGTTTTCTATCCAAAAATTGCAGTCGAGTTATATTGGATGAGCTATGGGATTCATAA
More
|
|||||||
| Protein seq | MEILCYKLHSSSTPFLCLYLLLLPCFLLPMAHAVHRHGGISLRSQQMALLHWKSTLQSTGPQMRSSWQASTSPCNWTGITCRAAHQAMSWVITNISLPDAGIHGQLGELNFSSLPFLTYIDLSSNSVYGPIPSSISSLSALTYLDLQLNQLTGRMPDEISELQRLTMLDLSYNNLTGHIPASVGNLTMITELSIHRNMVSGPIPKEIGMLANLQLLQLSNNTLSGEIPTTLANLTNLDTFYLDGNELSGPVPPKLCKLTNLQYLALGDNKLTGEIPTCIGNLTKMIKLYLFRNQIIGSIPPEIGNLAMLTDLVLNENKLKGSLPTELGNLTMLNNLFLHENQITGSIPPGLGIISNLQNLILHSNQISGSIPGTLANLTKLIALDLSKNQINGSIPQEFGNLVNLQLLSLEENQISGSIPKSLGNFQNMQNLNFRSNQLSNSLPQEFGNITNMVELDLASNSLSGQLPANICAGTSLKLLFLSLNMFNGPVPRSLKTCTSLVRLFLDGNQLTGDISKHFGVYPKLKKMSLMSNRLSGQISPKWGACPELAILNIAENMITGTIPPALSKLPNLVELKLSSNHVNGVIPPEIGNLINLYSLNLSFNKLSGSIPSQLGNLRDLEYLDVSRNSLSGPIPEELGRCTKLQLLRINNNHFSGNLPATIGNLASIQIMLDVSNNKLDGLLPQDFGRMQMLVFLNLSHNQFTGRIPTSFASMVSLSTLDASYNNLEGPLPAGRLFQNASASWFLNNKGLCGNLSGLPSCYSAPGHNKRKLFRFLLPVVLVLGFAILATVVLGTVFIHNKRKPQESTTAKGRDMFSVWNFDGRLAFEDIVRATEDFDDKYIIGAGGYGKVYRAQLQDGQVVAVKKLHTTEEGLGDEKRFSCEMEILTQIRQRSIVKLYGFCSHPEYRFLVYEYIEQGSLHMTLADDELAKALDWQKRNILIKDVAQALCYLHHDCNPPIIHRDITSNNILLDTTLKAYVSDFGTARILRPDSSNWSALAGTYGYIAPELSYTSLVTEKCDVYSFGMVMLEVVIGKHPRDLLQHLTSSRDHNITIKEILDSRPLAPTTTEEENIVSLIKVVFSCLKASPQARPTMQEVYQTLIDYQTSSFLSKNCSRVILDELWDS
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | None | None | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0336300 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g03050 | RBH | 0.000000 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0002990 | SBH | 0.207678 | 0.717761 | 1.894961 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0002920 | SBH | 0.000000 | 0.586349 | 0.348483 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0013670 | SBH | 0.0 | 0.901293 | 1.114341 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0000270 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0002830 | SBH | 0.286334 | 1.885871 | 0.309288 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0023500 | RBH | 0.275928 | 0.50735 | 0.43962 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0013930 | SBH | 0.0 | 0.637118 | 0.109359 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0027000 | RBH | 0.316624 | 0.444251 | 2.189687 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0001770 | SBH | 0.175886 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0002990 | SBH | 0.049891 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0003030 | SBH | 1.288694 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0002850 | SBH | 0.0 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0003080 | SBH | 0.032294 | 1.517144 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G000971 | RBH | 1.907058 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0013840 | SBH | 0.0 | 0.0 | 0.0 |
