Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLima_10g0000650 | OGI:10004300 | 16/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | Chr10:1237063-1240646 | ||||||||
| Gene Symbol | OsBRI1, OsBRL2, RLCK288, OsRLCK288, LRR-RLK2, OsLRR-RLK2 | ||||||||||
| DNA seq | ttatatggcagttgccggcggcggcgcgtcgagctccctgagcatggcgaccacctgcagcatgtttgggcgctttgaggggaagtcgtcgacgcactgcagcgccatgtccatgaacctggccatctcgtcggcgttggcgccctcgacgacgagctccgggtcgagcacctccttcccggcgccgtccccgaccttcatcttgacccagcccacgaggttggtgtccccgaagtcgtccttgtcggtggggcggcggccggtgagcagctcgaggaggacgacgccgaaggagtagacgtcccccttcaccgtgcaccggaagctctggtagtactccggcggcacgtagcccggcgtcccggcgagcgtgctgacgctcaggtgcgtgtccagcgcgctgatgaggcgggccatgccgaagtcggcgacgcgcgcctccatgtcgccgtcgaggagcacgttgctggacttcatgtcgcggtggatgatgtgggggatgcagttgtggtggaggaagcacaggcccctcgccgcgccgcgcgccaccttcttccgctgctcccacgacatcgccggtgatgccgatctgccgccgtcgccgtgcagcgtgtcctccaggctgccgtggctcatgaactcgtacaccagcagccgctcctcgccgatcttgcagtagccgaggagggggacgaggttcttgtgcttgatcttgcccagcgtctccatctccgccatgaactcgcggtcgccctggtagctcaggtggatcagcttcttgatcgccacgcacgacccgtccttgagcgtcgccttgaacacctcgccgaacccgccggagccgatcaggctggcggcggagaagccattggtggcctcgatcagctgcgtgaaggtcagcttccggagctgccgctggaacgtcgccacgttgatgctcagcgcctccttctccgccttcccgagcttccatgtcgtcgccgtccgcgtcccgtcctggaggctgctcagcatcatcgccgagcgcacctcacgccgccgcgcccgcgccgccaccgcccatatcgccgccgcgcacgccagcccggccgacaccagcacggcgaggatcacgccgttggcccacgtcgccacggcgcgccgtgggggcggatccgtcgacgccgcggcggcgagcccggacatggtcgccgtcgggaggcggtcgccgcagggctccagcggcatgccgcacagccccgggttgccggcgtactggctcgccggcagcgtgctgagctggccccgctgcgggatctcgccggagaggttgttgtcggagacgtcgatctggacgaggaaggagaggttggagaaggagtccgggatgccgccctgcagccggttgcgcgacacgtcgaacacgccgaggttgcggaggcggccgagcgacgccgggatctcgccggtgaggttgttccgcgccaggtcgagcacctggagcacgaccatgtcgcccaactcctcggggatctcgccgtcgaggctgttgtacgagaggtcgaggtactccagcgtctggtaccgcgtccacccgctcacggcggcgccggagtagagccgcgtgaagtcgcagctcttgagggtgggcacctgcagcagccgctccggccggattccggcgaactccagcaatcccccaactcccttgcacgagttgccgacgttgcggacgaacgccagcgtgttcccggacaggatgccgctgagcggcgtggagccgagctggcggccgaggcggcgagggatctcgccggtgaggcggttgctgttgaggtccagccacatgaggctgctgcagttgccgagctccctggggatctcgccggcgaggctgttgttcgccagctgcagcacggcgaggcgggacagccgcccgaactccggccggatggtgccggtgatctggttgctcgtcagcgacacccactcgaggccggtgcagttgaagagctcgacggggatgtcgccgccgatgaagttgttgttcaggatcagcgtccggagattccggcattgcccgagatccgccggaatccggccgtcgaggccattgaaccacatcaccagcttctccagggcgcggagccggccgagctccggcgggatcgggccgcgcaggtagttgatgctgaagtcgatcacccgcagccgcgagcagttggacaagcccggcgggatcgtgccggcgacgaggttgtccggcagccggagctcctccagcgccgcgccgggcgagcagagctcggccgggagcgcgccggagatcttgttgctgctcaggtcggcgacgcggaggttcttgcagtgggcgatggtgtccgggagagagccggagatgaagttgttgctgaggaggaggctctcgaccgccgtgaggttgccgagcacggcggccgggatcccgccggagacgttgttgttggcgacgtcgagcagccggagcgcgtggcacgacgacagcgactccgggatggagccggagatgttgttactcgagacgcggaggacacgcagcgacgcgcacgcgttcctcccgaggccgggcgggatggcgccggtgaggtggttccacgacacgtcgagcacttcgagcccggcgatggcgccgattccctccggtatcgcgccggcgaggccgttgtacgacaggttgagcgtcgtgaggcccgcgcagccggacagcgacggcgggatggcgccggtgaagcggttgccggacaggtcgaggacggccagcgtcgcggggagcgacacgccggagatgtcgccggacatgttgttgccggacacgtcgaacgaccggatattgctcgccaggagcatcccgggaagctcgccggtgaggttgttcctcgcgaggctgacatcggtgaggttggggtaacacgccagaaagccgtcgggaagccggccggcgaggccgccatcggagaggtcgagctgcagcagcgcgcgcgggagcttaaccaggtcaccggcatcaacgtgcagctcgccattgccggagaggttcaacctgcacaacgtgtcgagaccagagagggcggcaagctcggcgcgcccggcgaggccgccggcggcgaggtcgagctccgtcaccctgccgtcgccgttgcacgtcacgccacgccagcgacatggaccaggatccacccacgacgagaggactcctctaggatccttgtggacgaacgccttgaagcggaggagcgccgccgcatcggtttccgccgccgccgaggacgacgacacgtagatcgaggagaggagaagtgggatgagaatgtccatttggcatgtggatgcaatgttgggacaatgaggatggatggatgaagaaaagagtgacagagggtgagtgagagcaagtgttgtgttggtcactcttgatgatgatcagtggtttacaaagaaagattatggcttatggtgtgtaatcctctgcttttgagagataaagatggctttttctcttctttttttttttgaagtggtgtttataaaacatcaccagttaagggtgctttggtacacttttgtgt
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| CDS seq | atggacattctcatcccacttctcctctcctcgatctacgtgtcgtcgtcctcggcggcggcggaaaccgatgcggcggcgctcctccgcttcaaggcgttcgtccacaaggatcctagaggagtcctctcgtcgtgggtggatcctggtccatgtcgctggcgtggcgtgacgtgcaacggcgacggcagggtgacggagctcgacctcgccgccggcggcctcgccgggcgcgccgagcttgccgccctctctggtctcgacacgttgtgcaggttgaacctctccggcaatggcgagctgcacgttgatgccggtgacctggttaagctcccgcgcgcgctgctgcagctcgacctctccgatggcggcctcgccggccggcttcccgacggctttctggcgtgttaccccaacctcaccgatgtcagcctcgcgaggaacaacctcaccggcgagcttcccgggatgctcctggcgagcaatatccggtcgttcgacgtgtccggcaacaacatgtccggcgacatctccggcgtgtcgctccccgcgacgctggccgtcctcgacctgtccggcaaccgcttcaccggcgccatcccgccgtcgctgtccggctgcgcgggcctcacgacgctcaacctgtcgtacaacggcctcgccggcgcgataccggagggaatcggcgccatcgccgggctcgaagtgctcgacgtgtcgtggaaccacctcaccggcgccatcccgcccggcctcgggaggaacgcgtgcgcgtcgctgcgtgtcctccgcgtctcgagtaacaacatctccggctccatcccggagtcgctgtcgtcgtgccacgcgctccggctgctcgacgtcgccaacaacaacgtctccggcgggatcccggccgccgtgctcggcaacctcacggcggtcgagagcctcctcctcagcaacaacttcatctccggctctctcccggacaccatcgcccactgcaagaacctccgcgtcgccgacctgagcagcaacaagatctccggcgcgctcccggccgagctctgctcgcccggcgcggcgctggaggagctccggctgccggacaacctcgtcgccggcacgatcccgccgggcttgtccaactgctcgcggctgcgggtgatcgacttcagcatcaactacctgcgcggcccgatcccgccggagctcggccggctccgcgccctggagaagctggtgatgtggttcaatggcctcgacggccggattccggcggatctcgggcaatgccggaatctccggacgctgatcctgaacaacaacttcatcggcggcgacatccccgtcgagctcttcaactgcaccggcctcgagtgggtgtcgctgacgagcaaccagatcaccggcaccatccggccggagttcgggcggctgtcccgcctcgccgtgctgcagctggcgaacaacagcctcgccggcgagatccccagggagctcggcaactgcagcagcctcatgtggctggacctcaacagcaaccgcctcaccggcgagatccctcgccgcctcggccgccagctcggctccacgccgctcagcggcatcctgtccgggaacacgctggcgttcgtccgcaacgtcggcaactcgtgcaagggagttgggggattgctggagttcgccggaatccggccggagcggctgctgcaggtgcccaccctcaagagctgcgacttcacgcggctctactccggcgccgccgtgagcgggtggacgcggtaccagacgctggagtacctcgacctctcgtacaacagcctcgacggcgagatccccgaggagttgggcgacatggtcgtgctccaggtgctcgacctggcgcggaacaacctcaccggcgagatcccggcgtcgctcggccgcctccgcaacctcggcgtgttcgacgtgtcgcgcaaccggctgcagggcggcatcccggactccttctccaacctctccttcctcgtccagatcgacgtctccgacaacaacctctccggcgagatcccgcagcggggccagctcagcacgctgccggcgagccagtacgccggcaacccggggctgtgcggcatgccgctggagccctgcggcgaccgcctcccgacggcgaccatgtccgggctcgccgccgcggcgtcgacggatccgcccccacggcgcgccgtggcgacgtgggccaacggcgtgatcctcgccgtgctggtgtcggccgggctggcgtgcgcggcggcgatatgggcggtggcggcgcgggcgcggcggcgtgaggtgcgctcggcgatgatgctgagcagcctccaggacgggacgcggacggcgacgacatggaagctcgggaaggcggagaaggaggcgctgagcatcaacgtggcgacgttccagcggcagctccggaagctgaccttcacgcagctgatcgaggccaccaatggcttctccgccgccagcctgatcggctccggcgggttcggcgaggtgttcaaggcgacgctcaaggacgggtcgtgcgtggcgatcaagaagctgatccacctgagctaccagggcgaccgcgagttcatggcggagatggagacgctgggcaagatcaagcacaagaacctcgtccccctcctcggctactgcaagatcggcgaggagcggctgctggtgtacgagttcatgagccacggcagcctggaggacacgctgcacggcgacggcggcagatcggcatcaccggcgatgtcgtgggagcagcggaagaagggggacgtctactccttcggcgtcgtcctcctcgagctgctcaccggccgccgccccaccgacaaggacgacttcggggacaccaacctcgtgggctgggtcaagatgaaggtcggggacggcgccgggaaggaggtgctcgacccggagctcgtcgtcgagggcgccaacgccgacgagatggccaggttcatggacatggcgctgcagtgcgtcgacgacttcccctcaaagcgcccaaacatgctgcaggtggtcgccatgctcagggagctcgacgcgccgccgccggcaactgccatataa
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| Protein seq | MDILIPLLLSSIYVSSSSAAAETDAAALLRFKAFVHKDPRGVLSSWVDPGPCRWRGVTCNGDGRVTELDLAAGGLAGRAELAALSGLDTLCRLNLSGNGELHVDAGDLVKLPRALLQLDLSDGGLAGRLPDGFLACYPNLTDVSLARNNLTGELPGMLLASNIRSFDVSGNNMSGDISGVSLPATLAVLDLSGNRFTGAIPPSLSGCAGLTTLNLSYNGLAGAIPEGIGAIAGLEVLDVSWNHLTGAIPPGLGRNACASLRVLRVSSNNISGSIPESLSSCHALRLLDVANNNVSGGIPAAVLGNLTAVESLLLSNNFISGSLPDTIAHCKNLRVADLSSNKISGALPAELCSPGAALEELRLPDNLVAGTIPPGLSNCSRLRVIDFSINYLRGPIPPELGRLRALEKLVMWFNGLDGRIPADLGQCRNLRTLILNNNFIGGDIPVELFNCTGLEWVSLTSNQITGTIRPEFGRLSRLAVLQLANNSLAGEIPRELGNCSSLMWLDLNSNRLTGEIPRRLGRQLGSTPLSGILSGNTLAFVRNVGNSCKGVGGLLEFAGIRPERLLQVPTLKSCDFTRLYSGAAVSGWTRYQTLEYLDLSYNSLDGEIPEELGDMVVLQVLDLARNNLTGEIPASLGRLRNLGVFDVSRNRLQGGIPDSFSNLSFLVQIDVSDNNLSGEIPQRGQLSTLPASQYAGNPGLCGMPLEPCGDRLPTATMSGLAAAASTDPPPRRAVATWANGVILAVLVSAGLACAAAIWAVAARARRREVRSAMMLSSLQDGTRTATTWKLGKAEKEALSINVATFQRQLRKLTFTQLIEATNGFSAASLIGSGGFGEVFKATLKDGSCVAIKKLIHLSYQGDREFMAEMETLGKIKHKNLVPLLGYCKIGEERLLVYEFMSHGSLEDTLHGDGGRSASPAMSWEQRKKGDVYSFGVVLLELLTGRRPTDKDDFGDTNLVGWVKMKVGDGAGKEVLDPELVVEGANADEMARFMDMALQCVDDFPSKRPNMLQVVAMLRELDAPPPATAI |
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| Function | Brassinosteroid LRR receptor kinase BRL2 [UniProtKB/Swiss-Prot:Q7G768] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_10g0000650 | OsLima_10g0000650.01 | Chr10 | 1237063 | 1240646 | - | NAM | ||
| CDS seq | atggacattctcatcccacttctcctctcctcgatctacgtgtcgtcgtcctcggcggcggcggaaaccgatgcggcggcgctcctccgcttcaaggcgttcgtccacaaggatcctagaggagtcctctcgtcgtgggtggatcctggtccatgtcgctggcgtggcgtgacgtgcaacggcgacggcagggtgacggagctcgacctcgccgccggcggcctcgccgggcgcgccgagcttgccgccctctctggtctcgacacgttgtgcaggttgaacctctccggcaatggcgagctgcacgttgatgccggtgacctggttaagctcccgcgcgcgctgctgcagctcgacctctccgatggcggcctcgccggccggcttcccgacggctttctggcgtgttaccccaacctcaccgatgtcagcctcgcgaggaacaacctcaccggcgagcttcccgggatgctcctggcgagcaatatccggtcgttcgacgtgtccggcaacaacatgtccggcgacatctccggcgtgtcgctccccgcgacgctggccgtcctcgacctgtccggcaaccgcttcaccggcgccatcccgccgtcgctgtccggctgcgcgggcctcacgacgctcaacctgtcgtacaacggcctcgccggcgcgataccggagggaatcggcgccatcgccgggctcgaagtgctcgacgtgtcgtggaaccacctcaccggcgccatcccgcccggcctcgggaggaacgcgtgcgcgtcgctgcgtgtcctccgcgtctcgagtaacaacatctccggctccatcccggagtcgctgtcgtcgtgccacgcgctccggctgctcgacgtcgccaacaacaacgtctccggcgggatcccggccgccgtgctcggcaacctcacggcggtcgagagcctcctcctcagcaacaacttcatctccggctctctcccggacaccatcgcccactgcaagaacctccgcgtcgccgacctgagcagcaacaagatctccggcgcgctcccggccgagctctgctcgcccggcgcggcgctggaggagctccggctgccggacaacctcgtcgccggcacgatcccgccgggcttgtccaactgctcgcggctgcgggtgatcgacttcagcatcaactacctgcgcggcccgatcccgccggagctcggccggctccgcgccctggagaagctggtgatgtggttcaatggcctcgacggccggattccggcggatctcgggcaatgccggaatctccggacgctgatcctgaacaacaacttcatcggcggcgacatccccgtcgagctcttcaactgcaccggcctcgagtgggtgtcgctgacgagcaaccagatcaccggcaccatccggccggagttcgggcggctgtcccgcctcgccgtgctgcagctggcgaacaacagcctcgccggcgagatccccagggagctcggcaactgcagcagcctcatgtggctggacctcaacagcaaccgcctcaccggcgagatccctcgccgcctcggccgccagctcggctccacgccgctcagcggcatcctgtccgggaacacgctggcgttcgtccgcaacgtcggcaactcgtgcaagggagttgggggattgctggagttcgccggaatccggccggagcggctgctgcaggtgcccaccctcaagagctgcgacttcacgcggctctactccggcgccgccgtgagcgggtggacgcggtaccagacgctggagtacctcgacctctcgtacaacagcctcgacggcgagatccccgaggagttgggcgacatggtcgtgctccaggtgctcgacctggcgcggaacaacctcaccggcgagatcccggcgtcgctcggccgcctccgcaacctcggcgtgttcgacgtgtcgcgcaaccggctgcagggcggcatcccggactccttctccaacctctccttcctcgtccagatcgacgtctccgacaacaacctctccggcgagatcccgcagcggggccagctcagcacgctgccggcgagccagtacgccggcaacccggggctgtgcggcatgccgctggagccctgcggcgaccgcctcccgacggcgaccatgtccgggctcgccgccgcggcgtcgacggatccgcccccacggcgcgccgtggcgacgtgggccaacggcgtgatcctcgccgtgctggtgtcggccgggctggcgtgcgcggcggcgatatgggcggtggcggcgcgggcgcggcggcgtgaggtgcgctcggcgatgatgctgagcagcctccaggacgggacgcggacggcgacgacatggaagctcgggaaggcggagaaggaggcgctgagcatcaacgtggcgacgttccagcggcagctccggaagctgaccttcacgcagctgatcgaggccaccaatggcttctccgccgccagcctgatcggctccggcgggttcggcgaggtgttcaaggcgacgctcaaggacgggtcgtgcgtggcgatcaagaagctgatccacctgagctaccagggcgaccgcgagttcatggcggagatggagacgctgggcaagatcaagcacaagaacctcgtccccctcctcggctactgcaagatcggcgaggagcggctgctggtgtacgagttcatgagccacggcagcctggaggacacgctgcacggcgacggcggcagatcggcatcaccggcgatgtcgtgggagcagcggaagaagggggacgtctactccttcggcgtcgtcctcctcgagctgctcaccggccgccgccccaccgacaaggacgacttcggggacaccaacctcgtgggctgggtcaagatgaaggtcggggacggcgccgggaaggaggtgctcgacccggagctcgtcgtcgagggcgccaacgccgacgagatggccaggttcatggacatggcgctgcagtgcgtcgacgacttcccctcaaagcgcccaaacatgctgcaggtggtcgccatgctcagggagctcgacgcgccgccgccggcaactgccatataa
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| Protein seq | MDILIPLLLSSIYVSSSSAAAETDAAALLRFKAFVHKDPRGVLSSWVDPGPCRWRGVTCNGDGRVTELDLAAGGLAGRAELAALSGLDTLCRLNLSGNGELHVDAGDLVKLPRALLQLDLSDGGLAGRLPDGFLACYPNLTDVSLARNNLTGELPGMLLASNIRSFDVSGNNMSGDISGVSLPATLAVLDLSGNRFTGAIPPSLSGCAGLTTLNLSYNGLAGAIPEGIGAIAGLEVLDVSWNHLTGAIPPGLGRNACASLRVLRVSSNNISGSIPESLSSCHALRLLDVANNNVSGGIPAAVLGNLTAVESLLLSNNFISGSLPDTIAHCKNLRVADLSSNKISGALPAELCSPGAALEELRLPDNLVAGTIPPGLSNCSRLRVIDFSINYLRGPIPPELGRLRALEKLVMWFNGLDGRIPADLGQCRNLRTLILNNNFIGGDIPVELFNCTGLEWVSLTSNQITGTIRPEFGRLSRLAVLQLANNSLAGEIPRELGNCSSLMWLDLNSNRLTGEIPRRLGRQLGSTPLSGILSGNTLAFVRNVGNSCKGVGGLLEFAGIRPERLLQVPTLKSCDFTRLYSGAAVSGWTRYQTLEYLDLSYNSLDGEIPEELGDMVVLQVLDLARNNLTGEIPASLGRLRNLGVFDVSRNRLQGGIPDSFSNLSFLVQIDVSDNNLSGEIPQRGQLSTLPASQYAGNPGLCGMPLEPCGDRLPTATMSGLAAAASTDPPPRRAVATWANGVILAVLVSAGLACAAAIWAVAARARRREVRSAMMLSSLQDGTRTATTWKLGKAEKEALSINVATFQRQLRKLTFTQLIEATNGFSAASLIGSGGFGEVFKATLKDGSCVAIKKLIHLSYQGDREFMAEMETLGKIKHKNLVPLLGYCKIGEERLLVYEFMSHGSLEDTLHGDGGRSASPAMSWEQRKKGDVYSFGVVLLELLTGRRPTDKDDFGDTNLVGWVKMKVGDGAGKEVLDPELVVEGANADEMARFMDMALQCVDDFPSKRPNMLQVVAMLRELDAPPPATAI
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.000000 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0114400 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g02500 | RBH | 0.000000 | 0.000000 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os10g0114400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0000690 | RBH | 0.0 | 7.051491 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0000680 | RBH | 0.0 | 6.464419 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0000680 | RBH | 0.0 | 13.021489 | 0.280552 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0000630 | RBH | 0.021345 | 0.250575 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0000610 | RBH | 0.0 | 2.067719 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0019100 | RBH | 0.2463655 | 6.8540815 | 0.019198 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0000660 | RBH | 0.0 | 0.397836 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0020900 | RBH | 0.232743 | 2.247673 | 0.032077 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0000950 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0000690 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0000650 | RBH | 0.0 | 5.871894 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0000640 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0000630 | RBH | 0.000000 | 4.420125 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G000650 | RBH | 0.000000 | 1.474400 | 0.106240 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0000570 | RBH | 0.0 | 0.000000 | 0.000000 |
