Basic Info |
Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
OsZS97_11G0087900 | OGI:11015440 | 16/16 | Zhenshan 97 | ZS97RS3 | HZAU | Chr11:5450294-5453978 | ||||||||
Gene Symbol | OsFbox584, Os_F0231, OsFbox585, Os_F0294, Fbox-14, OsFbox586, Os_F0088, Fbox-13 | ||||||||||
DNA seq | TCAAAACAGTGGTGCATCAAACATTTTCCTCTTCCTATTCGTCTTCGTCTTCCTCTTCATCTTCTTCTTCGTAAGGGTCTCCAAAAGAGTCTTCATCTTCGTCTTCGTGAGAGTTCTCATCTTCATCTTCCTCCACTTCGTCCTGGTCATTGTCATATCCTTCCAAAATCTCGATTTCCTTACAACTAAAAACTGCACAAAGAAACAAATAAGAAGAGCACAGTAAATTTCAAGAGGTCCAACCTGAAAATTCACTCCAAAATAAAAACTTCAAATCCATTGACAAACTTAGTGTATTGGACCAACCCTTCAAAATACAAATTGACATAAATACTTCATTACTTCTCCAGATCCAAAATCAGATTATGTCCACTACTTCATTCAAAGAAAGGGAAACATAATAAAATGCCGTCACTTGGAGAAGCATTGGTCCTTTATAATATGGTTGCATCCTATGCGGCATAATTGCTGGATTCTCTATAGTCTAGCACACAACAAGAAGAAAATTGTATGGTCTAGGGACTATATGGGTACTTATGGCAATTCATAAACAAGATTTTTGGACACAATGGCCAGGAGCTGTGAGCCCAACATAACAAATATAATTTAGTGTCACCGGAGAACATTACCTTAGGCAAACAAAACTACTAAGCAATCTTGCCCAATTATTGGTTACTAGCTGCTATGATATAACCAGGATGGCTAGTGCAGCAAGCTGGCACACTCAGCACCTCTAGTACGGTAAACTGATGGTTACAGAATAACAAAGTTTTCTCACAATAATAGAGTTCAACAACGAGATAAAAAGTATGTGAGGTACTTGCGTACATGGAAAATGGCATGCGAGCTATAAGATGGCAATATCGACTCTCACAAATATACAACTAATGGGAAAGAAAATCAAATCAAATGATTGAAAGATATAATTACATACTACACACATGTTGACATACTTGTTATGTTATGCAAGAAAATTTTAGAAATCTTAATATGCTTTTTTGAATACAACCAGCCAAAAGAGTAGTCTAGATAATGTCTTCCCAACCATACCAAATGCAGTGCATATGCTTTCAATTCCCAATTAATCCATGATCCTAACATCCATTTCCCAATAACTTAGAGTTTCGATACTGCTTACTACATTTCACGCATATGAAGGCAAAGGAAAATTTCAGAATTGTACAAAGAATGAAGAATGTTTAAGTATGTTGAATGTAGACAGATTTCAAAACTTTGAGTACTCTCTTATCAACCGCTTCGCATTTGATTTCAACTATCTCAAGGTGTGTTGATATTACAAGTGATCTATCCATTGAATGGCAGTTTCCTTTGATTTTCATTCTATGTTTAGGTCCCTGTCAGAAATTAAACATTTTAAAGTCAATAGAAAAATGCCCCAAAACTTCAACAAGTAATCAATTGGCCAATTAGATAAGGTATACCTTGGAATAGATCTGAAGAATGAGATTCTCTAGAACCAGTGCATGTTCAAGAATGCAAGATAGTGCACTAAAATCATCAGGCACACACCAGTATTCATTGAGTAACAAAGTCTTTAACTTGGTAAATGTTGGGCACCATTCCAAATCCCTTTTGAAAATAAACTGGGTAAAATGCAAACAAGAAGATAAACAAATCCTCAGAGTTCAACTGGATATAAACATAGTATAATAGAATAATAAGACAACATAAACTACTTAAAGATGGAAATGCAAGCATACCAATCTACGTTCATTTATCAGCACCAACGTCTTAGCTTCTGATAAACCTTCCAAACGCATGCATTTGTGGTCCTTGATATCATAACAAGGTTCAAAGCCCTCACAACAACAATCCCCAAAGTCATAATGACTACACGATTCTTTATAACAGTAGAGGACTCTAACAAATGCGTCAACTAACGATGGCATCCACTCAAGCACTGGAGTCCTGCCATGGAAATCATCCAGCTTCAGAGAAACAAGACTCGGCATAGCGATACGTATCCGAGACGTCTCACTGAAATAGGAATTGGTTATGCTCAAACGTTTTGCAGAGCTAGATGAGATCTTGGCACAGTCAAATTTGCATGACTCAAACACTAGATGCTCCAATGCTGGACAGCTCGAGAAGTTAAGAAAGCTGTCGTTTAGGCCTATGTTCTTAAGCTGTAGCCTCGTCAAGTGTCGGGAGACAAGTGGCATCTCATCTATCAGAAACGGGAAGCGATACCATATATCGACATCGAGCAAGAGGAACCGAACCTTGTGGAGCAAAGCATGCCTGAACCAGTGGTTCACCCGTACTGTATCATCGAGGCCCTCGTCTCTGTACCAATCGAGCCAACGGAACCTTAGCACGCACGTGTCGAGAGGTGCGCCATCACGGAGTAGCAGCAGACGGTCGAGAAACTCCTTATTGTCCTTCACGCAGCGCAGATAGATATCGTCTTCGCCAATGCGCAGCCCGGTGGCAGACTTCCAGAGGTGGAGCCATCGCCGGGCTAGCAGGCACGTCCGGACAGCCTCCTGCGCCGGTAGGAAGGAGAGCACGTGGTGGAGCACCTCGTCCGGGAGGGTCCCCTATGCGGTCTCCCCCGGTCGAGGGAGGCGATTCCTTGGCCATCTTCTGCGGAGACATTCCGTCGAACAGGTTGCGGGCGTCGCCGCGGCGCCCCCACTGGCGTAGCAAGAACCGCTCGGGCGACACGAGGAGCGCCAAATCCTAGCGTGAACGAGCAGGAGAGAGGGCTGTGCTGTTCGGGTAAGCAGCTCACATCGCCGCTGGAAGCTTTCCCCCGGCCACCGGAGACCAAAGAGAAGAGAGTGGAACGCGCGGCAGCAAGGATACGCACGCCGACGGCGCGACACTCGCTAGCCCGACGAACGGTCAGGTCGCGCGGGGGGTGGGGGAGAGAATTCCGGCGGGGCGAGGCGGATGGAGAAGCAGCGCTGCGATGAGCGGAGGAATCGCCGGATCGGAGTGGAGATGGAGAAGACGACGGGGTCACAGACTCAGAGTCTCACGGAGGAGATGAAAGTTTTTTTTTTTCTTCTGTTTTTTTTTTTTTTTGACGGGAAGGAGATGAAGGGATATGGCTGGGTTTCCAGATTTTTTACTTATTTTTTAAAAAAGATTTAACAAATAAATTTTCAATTTTAAAGTTTTACAGAACTATACTCTTTCCACCCTATCACACGGCGGGACATAAATCGTCATACAGTAGGGCAATCCATGTGACGTGGCACCCCGTAGGAGAGGCGCACCAACGGAGAGCTTGGCAGCGGCGCAAGGTGGGCGGCGAGCTCGGTGGCTTCCTGCGGTCTGTGGCGACGAGGGTGGCAATGGACGGCGGCAGCGGCCTCTTCCTAGCGACGACAGCGTCTTCGAGTCCCTTCCACAGGTGAGGTTCTTCGTTCAACCACCCCCCCTCCTCCCCTCCCCTTCTCTCTCCATAGACCACCTTCTTTCTCCCTTTTTTTCCCAAACCACCCGTGCTTCCGCAAATCACACTAATATGTTTGAACCGCTGCCTTTTGTATTTCCTTTTATTTTAAATCTAACGTGGAGCTTGAGACCGCTGTCCATGATGGTACATTGAACATAATCTTAGTAGTAGTACCCGTTGCAGTGGTCAATGTACCTTTATAAGAAATCCTCCTGAGCAAAAGATAGCATAGCGGTAAAAGCCATCACCTTTTTTCAT
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CDS seq | ATGAAAAAAGGTGATGGCTTTTACCGCTATGCTATCTTTTGCTCAGGAGGATTTCTTATAAAGGAGGCTGTCCGGACGTGCCTGCTAGCCCGGCGATGGCTCCACCTCTGGAAGTCTGCCACCGGGCTGCGCATTGGCGAAGACGATATCTATCTGCGCTGCGTGAAGGACAATAAGGAGTTTCTCGACCGTCTGCTGCTACTCCGTGATGGCGCACCTCTCGACACGTGCGTGCTAAGGTTCCGTTGGCTCGATTGGTACAGAGACGAGGGCCTCGATGATACAGTACGGGTGAACCACTGGTTCAGGCATGCTTTGCTCCACAAGGTTCGGTTCCTCTTGCTCGATGTCGATATATGGTATCGCTTCCCGTTTCTGATAGATGAGATGCCACTTGTCTCCCGACACTTGACGAGGCTACAGCTTAAGAACATAGGCCTAAACGACAGCTTTCTTAACTTCTCGAGCTGTCCAGCATTGGAGCATCTAGTGTTTGAGTCATGCAAATTTGACTGTGCCAAGATCTCATCTAGCTCTGCAAAACGTTTGAGCATAACCAATTCCTATTTCAGTGAGACGTCTCGGATACGTATCGCTATGCCGAGTCTTGTTTCTCTGAAGCTGGATGATTTCCATGGCAGGACTCCAGTGCTTGAGTGGATGCCATCGTTAGTTGACGCATTTGTTAGAGTCCTCTACTGTTATAAAGAATCGTGTAGTCATTATGACTTTGGGGATTGTTGTTGTGAGGGCTTTGAACCTTGTTATGATATCAAGGACCACAAATGCATGCGTTTGGAAGGTTTATCAGAAGCTAAGACGTTGGTGCTGATAAATGAACGTAGATTGTTTATTTTCAAAAGGGATTTGGAATGGTGCCCAACATTTACCAAGTTAAAGACTTTGTTACTCAATGAATACTGGTGTGTGCCTGATGATTTTAGTGCACTATCTTGCATTCTTGAACATGCACTGGTTCTAGAGAATCTCATTCTTCAGATCTATTCCAAGTTTTTAGTTGTAAGGAAATCGAGATTTTGGAAGGATATGACAATGACCAGGACGAAGTGGAGGAAGATGAAGATGAGAACTCTCACGAAGACGAAGATGAAGACTCTTTTGGAGACCCTTACGAAGAAGAAGATGAAGAGGAAGACGAAGACGAATAGGAAGAGGAAAATGTTTGATGCACCACTGTTTTGA
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Protein seq | MKKGDGFYRYAIFCSGGFLIKEAVRTCLLARRWLHLWKSATGLRIGEDDIYLRCVKDNKEFLDRLLLLRDGAPLDTCVLRFRWLDWYRDEGLDDTVRVNHWFRHALLHKVRFLLLDVDIWYRFPFLIDEMPLVSRHLTRLQLKNIGLNDSFLNFSSCPALEHLVFESCKFDCAKISSSSAKRLSITNSYFSETSRIRIAMPSLVSLKLDDFHGRTPVLEWMPSLVDAFVRVLYCYKESCSHYDFGDCCCEGFEPCYDIKDHKCMRLEGLSEAKTLVLINERRLFIFKRDLEWCPTFTKLKTLLLNEYWCVPDDFSALSCILEHALVLENLILQIYSKFLVVRKSRFWKDMTMTRTKWRKMKMRTLTKTKMKTLLETLTKKKMKRKTKTNRKRKMFDAPLF |
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Function | - |
Transcripts
Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsZS97_11G0087900 | OsZS97_11T0087900.1 | Chr11 | 5450294 | 5453978 | - | makerRMon | ||
CDS seq | ATGAAAAAAGGTGATGGCTTTTACCGCTATGCTATCTTTTGCTCAGGAGGATTTCTTATAAAGGAGGCTGTCCGGACGTGCCTGCTAGCCCGGCGATGGCTCCACCTCTGGAAGTCTGCCACCGGGCTGCGCATTGGCGAAGACGATATCTATCTGCGCTGCGTGAAGGACAATAAGGAGTTTCTCGACCGTCTGCTGCTACTCCGTGATGGCGCACCTCTCGACACGTGCGTGCTAAGGTTCCGTTGGCTCGATTGGTACAGAGACGAGGGCCTCGATGATACAGTACGGGTGAACCACTGGTTCAGGCATGCTTTGCTCCACAAGGTTCGGTTCCTCTTGCTCGATGTCGATATATGGTATCGCTTCCCGTTTCTGATAGATGAGATGCCACTTGTCTCCCGACACTTGACGAGGCTACAGCTTAAGAACATAGGCCTAAACGACAGCTTTCTTAACTTCTCGAGCTGTCCAGCATTGGAGCATCTAGTGTTTGAGTCATGCAAATTTGACTGTGCCAAGATCTCATCTAGCTCTGCAAAACGTTTGAGCATAACCAATTCCTATTTCAGTGAGACGTCTCGGATACGTATCGCTATGCCGAGTCTTGTTTCTCTGAAGCTGGATGATTTCCATGGCAGGACTCCAGTGCTTGAGTGGATGCCATCGTTAGTTGACGCATTTGTTAGAGTCCTCTACTGTTATAAAGAATCGTGTAGTCATTATGACTTTGGGGATTGTTGTTGTGAGGGCTTTGAACCTTGTTATGATATCAAGGACCACAAATGCATGCGTTTGGAAGGTTTATCAGAAGCTAAGACGTTGGTGCTGATAAATGAACGTAGATTGTTTATTTTCAAAAGGGATTTGGAATGGTGCCCAACATTTACCAAGTTAAAGACTTTGTTACTCAATGAATACTGGTGTGTGCCTGATGATTTTAGTGCACTATCTTGCATTCTTGAACATGCACTGGTTCTAGAGAATCTCATTCTTCAGATCTATTCCAAGTTTTTAGTTGTAAGGAAATCGAGATTTTGGAAGGATATGACAATGACCAGGACGAAGTGGAGGAAGATGAAGATGAGAACTCTCACGAAGACGAAGATGAAGACTCTTTTGGAGACCCTTACGAAGAAGAAGATGAAGAGGAAGACGAAGACGAATAGGAAGAGGAAAATGTTTGATGCACCACTGTTTTGA
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Protein seq | MKKGDGFYRYAIFCSGGFLIKEAVRTCLLARRWLHLWKSATGLRIGEDDIYLRCVKDNKEFLDRLLLLRDGAPLDTCVLRFRWLDWYRDEGLDDTVRVNHWFRHALLHKVRFLLLDVDIWYRFPFLIDEMPLVSRHLTRLQLKNIGLNDSFLNFSSCPALEHLVFESCKFDCAKISSSSAKRLSITNSYFSETSRIRIAMPSLVSLKLDDFHGRTPVLEWMPSLVDAFVRVLYCYKESCSHYDFGDCCCEGFEPCYDIKDHKCMRLEGLSEAKTLVLINERRLFIFKRDLEWCPTFTKLKTLLLNEYWCVPDDFSALSCILEHALVLENLILQIYSKFLVVRKSRFWKDMTMTRTKWRKMKMRTLTKTKMKTLLETLTKKKMKRKTKTNRKRKMFDAPLF
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Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
Leaf | Root | Panicle | |
FPKM | 1.645992 | 3.97096 | 7.203659 |
Homologues
Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
---|---|---|---|---|---|
Leaf | Root | Panicle | |||
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0202400 | SBH | 0.287599 | 0.0 | 0.888899 |
Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g09960 | RBH | 0.312777 | 0.359230 | 0.187554 |
Nipponbare | IRGSP 1.0 | RAP-db | Os11g0202400 | SBH | None | None | None |
Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0006690 | SBH | 0.419972 | 2.097456 | 3.382823 |
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0006550 | SBH | 0.142942 | 0.162571 | 0.531425 |
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0006600 | RBH | 0.000000 | 2.558610 | 1.576523 |
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0006430 | RBH | 0.026985 | 0.037452 | None |
PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0006500 | RBH | 3.054646 | 0.000000 | 3.525641 |
Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0086500 | SBH | 1.630338 | 3.605297 | 3.6334705 |
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0006520 | RBH | 0.112591 | 0.000000 | 0.288314 |
Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0085700 | SBH | 5.4372965 | 2.440776 | 7.4983255 |
LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0006430 | SBH | 0.084143 | 0.015012 | None |
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0006580 | RBH | 0.079067 | 0.0 | None |
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0006510 | SBH | 5.264083 | 0.390062 | None |
LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0006620 | SBH | 0.040105 | 0.0 | 0.065152 |
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0006620 | SBH | 0.0 | 1.136861 | None |
N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G006600 | SBH | 0.107812 | 1.806731 | 0.886747 |
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0006370 | SBH | 0.242504 | 2.849076 | 0.510408 |