Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsPr106_11g0006280 | OGI:11015440 | 16/16 | PR 106 | Os127742RS1 | Gramene(+IsoSeq) | Chr11:5149244-5149468 | ||||||||
| Gene Symbol | OsFbox572, Os_F0135, OsFbox577, Os_F0135, OsFbox591, Os_F0435, Fbox-5 | ||||||||||
| DNA seq | atgcggcaagagggagcagatgtgcgcggcagccacaagatcaagaagacgactgctgatgtggaaggcgggggtgaatggatcaacgccctcccggaagaggtcctgcagcacgtgatgtcgttcctgccggcgaagcaggccgtccggacctgcgtcctcgcccggcgctggcgccacctgtggaaatccatgcctgctctgcgttccatccatgatatctga |
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| CDS seq | atgcggcaagagggagcagatgtgcgcggcagccacaagatcaagaagacgactgctgatgtggaaggcgggggtgaatggatcaacgccctcccggaagaggtcctgcagcacgtgatgtcgttcctgccggcgaagcaggccgtccggacctgcgtcctcgcccggcgctggcgccacctgtggaaatccatgcctgctctgcgttccatccatgatatctga |
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| Protein seq | MRQEGADVRGSHKIKKTTADVEGGGEWINALPEEVLQHVMSFLPAKQAVRTCVLARRWRHLWKSMPALRSIHDI |
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| Function | Putative F-box/LRR-repeat protein At3g28410 [UniProtKB/Swiss-Prot:Q9LSJ3] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsPr106_11g0006280 | OsPr106_11g0006280.01 | Chr11 | 5149244 | 5149468 | + | NAM | ||
| CDS seq | atgcggcaagagggagcagatgtgcgcggcagccacaagatcaagaagacgactgctgatgtggaaggcgggggtgaatggatcaacgccctcccggaagaggtcctgcagcacgtgatgtcgttcctgccggcgaagcaggccgtccggacctgcgtcctcgcccggcgctggcgccacctgtggaaatccatgcctgctctgcgttccatccatgatatctga
More
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| Protein seq | MRQEGADVRGSHKIKKTTADVEGGGEWINALPEEVLQHVMSFLPAKQAVRTCVLARRWRHLWKSMPALRSIHDI |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 1.941152 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0199900 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g09360 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0199900 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0006940 | RBH | 0.072042 | 0.389919 | 0.259181 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0006930 | RBH | 0.000000 | 0.000000 | 0.269492 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0006530 | RBH | 0.629927 | 3.859250 | 2.320578 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0006840 | RBH | 0.007779 | 0.047929 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0006790 | RBH | 0.307655 | 0.691442 | 0.774625 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0082900 | RBH | 0.0438385 | 0.077304 | 0.0781035 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0006440 | RBH | 0.080080 | 0.0 | 0.486420 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0084800 | SBH | 2.744465 | 3.074941 | 5.580937 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0006760 | SBH | 0.000000 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0006830 | RBH | 0.021393 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0006510 | RBH | 5.264083 | 0.390062 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0006500 | RBH | 0.873359 | 0.0 | 0.723187 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0006540 | RBH | 0.147365 | 0.486698 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G006890 | RBH | 0.039427 | 0.142880 | 0.072140 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0006220 | RBH | 0.0 | 0.0 | 0.0 |
