Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_09g0314800 | OGI:09026240 | 5/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr09:8630970-8632927 | ||||||||
| Gene Symbol | RLCK270, OsRLCK270 | ||||||||||
| DNA seq | CAGGGAAGGAAACGAACCTGAACCATGGATGGACGCAGATGTGCTGATTGGCGCACGGCAGCGGCGGCACACTCCATCATTCGCATCATTTTGTTTTCATCATAATCATCTCCAATATCCGGATCAACAAGGATATCAAAGTTGCCTTCCTCCATAGCTTCTGAAATCAAGGGTTTTGCCTGAAGAAGCAAATTCAGAAATGTTCTATCAGGCTAGACATCAAAGTTCCTCTTAGAACTACATTTATTGGAGTGAAGGAAATGTATTAGATGTCAAGGAATGAATTTTGTCAAGATTCAAGAACTTCTTTTTGTTAGAAACTGACCCAACCAACTAACGTGCTGTCCATGTAAGACTCAGATGACTGAACCGGCAGCCTTCCAGTTATCAGTTCCAAGAGGACGACACCAAAAGCAAAGACATCGGCTTTGTCAGTAAGCTTCCCGCTAGACAGGAACTCTGGAGCAATGTACCTGCAGAAAAGAGGATTTGCTATGAATACAATGAGGGATAATATATACTTGTGCTATAGATATTCATGTTCAGAAATTAGAATGAACAAACTCGGAATACATAGGGAATGCTGAAGAGAAGTACTGACCCAAATGTGCCCATTATTCTTGTGGAAACATGGGTGTGGTTTCCTGGTTGCTACTTTGCTAGACCAAAATCTGCAACCTGCAAAGGATCAAGACATACTGAGTATAGGACTGTGCAATATAATGGCATATTGTTTGCAATTCAAACTTGTCCTGGGATTGCTTCAAAAAAAAAACTTGTCCTGGGAAAACCAGATCTTCTTGAAACGTTGAATAATATGTGCAGAGAGAGTACCTTGGGCTCAAAACCATGATCCAGAAGAATATTGGATGCCTTGACATCACGATGTATAATTTTAGGAGAACCTGAATAGTATAAACGGACTTTTTCGTATTAAATCACAGTTCAACACTAGATACGAAACTGAATATAAGTGTATAACGCGAAATGGATGGGTGGAGTAGAACTAACAGTCATCGTGTAGATAGGCCAAACCCCTTGCAGATCCCACAGCAATTTTCCATCTTTGCTGCCAATCCAGAGGTGGCCACTTGTCCCCTGAATTAAGTTCAACAGTAACATGATCAGATCAGAGTAAAAAACCAAGACTAAAAAAACATTGACTAAACAGTCAACGGATGCATTTGACAGAAGAAAAAACAAATATGTAAACCATTATTTTTTTTATTCATTTTAGATGTAGACATAGGTTTTATACCGTGTAAATGCGTGTCGAGCGTCTTGTTGGGGACGAACTCGTAAACCAGCAGCCTGTCGTTGCCGGAGATGCAGTATCCGACGAGGGAGACGAGGTTCCTGTGGTGCACGCGTGTGATGATGTCCGCCTCGGCGCGGAACTCGCGGTCGCCCTGCTTGCTCTCCGTCTTGAGCTTCTTGATCGCCACCTCGGTGCCGTCCTGCAGCCTCCCCCTGTACACGCACCCGAATCCGCCCTGCCCGATGACGTTGTCGGGGGAGAACCCGCCCGTCGCGGCGGCCAGCTGGTCGTACGAGAGCGAGCCGCCGTCGATGGAGATGGAGTGCGGGCGCTCGGAGCCGGCGTCGGAGAACGTGCCGCCGCTGGTCTGCGGCGCCGTCGGGTGGTGGTGCTGCTGCTGCATGAAGACGAATGGCAGCGGCGGCTGGTCACCTGCAAGCACCAAAGTGTGGTGGATATCTCCGACGACGACGACGACATGGACGTACGTACGTACACGACGTCGAACGTGACAAGAATCACAAGATGCGCGCACCTTTGTAGTAGGGGTTGGGGTTGTATAACATTGGCGGTGGTAGCGGAAGCGGCTGGGCCTGTTGCCGCCGCCGCCGCCGCCTCCATCGCCGGATCCAGAGCGCGAGCACGTACAAGCCCAAAACCAGACCGACAACCCCAGCGGCCACTTTGACGGCCACGGAAT
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| CDS seq | ATTCCGTGGCCGTCAAAGTGGCCGCTGGGGTTGTCGGTCTGGTTTTGGGCTTGTACGTGCTCGCGCTCTGGATCCGGCGATGGAGGCGGCGGCGGCGGCGGCAACAGGCCCAGCCGCTTCCGCTACCACCGCCAATGTTATACAACCCCAACCCCTACTACAAAGGTGCGCGCATCTTGTGATTCTTGTCACGTTCGACGTCGTGTACGTACGTACGTCCATGTCGTCGTCGTCGTCGGAGATATCCACCACACTTTGGTGCTTGCAGGTGACCAGCCGCCGCTGCCATTCGTCTTCATGCAGCAGCAGCACCACCACCCGACGGCGCCGCAGACCAGCGGCGGCACGTTCTCCGACGCCGGCTCCGAGCGCCCGCACTCCATCTCCATCGACGGCGGCTCGCTCTCGTACGACCAGCTGGCCGCCGCGACGGGCGGGTTCTCCCCCGACAACGTCATCGGGCAGGGCGGATTCGGGTGCGTGTACAGGGGGAGGCTGCAGGACGGCACCGAGGTGGCGATCAAGAAGCTCAAGACGGAGAGCAAGCAGGGCGACCGCGAGTTCCGCGCCGAGGCGGACATCATCACACGCGTGCACCACAGGAACCTCGTCTCCCTCGTCGGATACTGCATCTCCGGCAACGACAGGCTGCTGGTTTACGAGTTCGTCCCCAACAAGACGCTCGACACGCATTTACACGGGGACAAGTGGCCACCTCTGGATTGGCAGCAAAGATGGAAAATTGCTGTGGGATCTGCAAGGGGTTTGGCCTATCTACACGATGACTGTTCTCCTAAAATTATACATCGTGATGTCAAGGCATCCAATATTCTTCTGGATCATGGTTTTGAGCCCAAGGTTGCAGATTTTGGTCTAGCAAAGTAG
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| Protein seq | IPWPSKWPLGLSVWFWACTCSRSGSGDGGGGGGGNRPSRFRYHRQCYTTPTPTTKVRASCDSCHVRRRVRTYVHVVVVVGDIHHTLVLAGDQPPLPFVFMQQQHHHPTAPQTSGGTFSDAGSERPHSISIDGGSLSYDQLAAATGGFSPDNVIGQGGFGCVYRGRLQDGTEVAIKKLKTESKQGDREFRAEADIITRVHHRNLVSLVGYCISGNDRLLVYEFVPNKTLDTHLHGDKWPPLDWQQRWKIAVGSARGLAYLHDDCSPKIIHRDVKASNILLDHGFEPKVADFGLAK |
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| Function | Proline-rich receptor-like protein kinase PERK14 [UniProtKB/Swiss-Prot:O65530] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_09g0314800 | OsNip_09t0314800-00 | Chr09 | 8630970 | 8632927 | - | RAP2018-11-26 | ||
| CDS seq | ATTCCGTGGCCGTCAAAGTGGCCGCTGGGGTTGTCGGTCTGGTTTTGGGCTTGTACGTGCTCGCGCTCTGGATCCGGCGATGGAGGCGGCGGCGGCGGCGGCAACAGGCCCAGCCGCTTCCGCTACCACCGCCAATGTTATACAACCCCAACCCCTACTACAAAGGTGCGCGCATCTTGTGATTCTTGTCACGTTCGACGTCGTGTACGTACGTACGTCCATGTCGTCGTCGTCGTCGGAGATATCCACCACACTTTGGTGCTTGCAGGTGACCAGCCGCCGCTGCCATTCGTCTTCATGCAGCAGCAGCACCACCACCCGACGGCGCCGCAGACCAGCGGCGGCACGTTCTCCGACGCCGGCTCCGAGCGCCCGCACTCCATCTCCATCGACGGCGGCTCGCTCTCGTACGACCAGCTGGCCGCCGCGACGGGCGGGTTCTCCCCCGACAACGTCATCGGGCAGGGCGGATTCGGGTGCGTGTACAGGGGGAGGCTGCAGGACGGCACCGAGGTGGCGATCAAGAAGCTCAAGACGGAGAGCAAGCAGGGCGACCGCGAGTTCCGCGCCGAGGCGGACATCATCACACGCGTGCACCACAGGAACCTCGTCTCCCTCGTCGGATACTGCATCTCCGGCAACGACAGGCTGCTGGTTTACGAGTTCGTCCCCAACAAGACGCTCGACACGCATTTACACGGGGACAAGTGGCCACCTCTGGATTGGCAGCAAAGATGGAAAATTGCTGTGGGATCTGCAAGGGGTTTGGCCTATCTACACGATGACTGTTCTCCTAAAATTATACATCGTGATGTCAAGGCATCCAATATTCTTCTGGATCATGGTTTTGAGCCCAAGGTTGCAGATTTTGGTCTAGCAAAGTAG
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| Protein seq | IPWPSKWPLGLSVWFWACTCSRSGSGDGGGGGGGNRPSRFRYHRQCYTTPTPTTKVRASCDSCHVRRRVRTYVHVVVVVGDIHHTLVLAGDQPPLPFVFMQQQHHHPTAPQTSGGTFSDAGSERPHSISIDGGSLSYDQLAAATGGFSPDNVIGQGGFGCVYRGRLQDGTEVAIKKLKTESKQGDREFRAEADIITRVHHRNLVSLVGYCISGNDRLLVYEFVPNKTLDTHLHGDKWPPLDWQQRWKIAVGSARGLAYLHDDCSPKIIHRDVKASNILLDHGFEPKVADFGLAK
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.228829 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_08g0374600 | RBH | 0.313809 | 0.361681 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os09g14580 | RBH | 0.0 | 0.0 | 0.060303 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os09g0314800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_09g0004410 | SBH | 0.000000 | 16.838720 | 1.860261 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_09g0004440 | SBH | 0.0 | 3.649077 | 0.492325 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_09g0019200 | SBH | 0.0 | 0.227198 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_09g0005220 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_09g0005430 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_09G0153100 | RBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_09g0005590 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_09g0006480 | SBH | 0.0 | 0.111050 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_09g0008100 | SBH | 0.079551 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_09g0004420 | SBH | 0.000000 | 22.573561 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_09g0008040 | SBH | 0.000000 | 0.0 | 0.204835 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_09g0008060 | SBH | 0.042798 | 13.423765 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_09G004550 | SBH | 0.000000 | 1.554734 | 0.621094 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_09g0005360 | RBH | 0.0 | 0.0 | 0.0 |
