Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_09g0005360 | OGI:09026230 | 6/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr09:8915049-8919262 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | tcaatcatggccacacctaggaggggaagcaaggagttgaattgaagatgggggaagagaagctgtgaagtgttttacaaggatgtcgagcttgccaccgtagaggctggcgacctcgcggagcatgcgttccggctggtcccggacggagacgtcgcggactgagccggtgacgcggaaccccctgccctcccactccctgaggcgctcgcccggctcggcctcgttcctggagcaggtatgcacggccgcccccagcgccgccaactcgtccaccaccacacgcctgcgcatgaattccccgcgttgatcgtagaagcaacagaaggctccgcggcggaggtctccctagccagcgagaaggggataagtgtgttggggtgagtatccgatgccgccggcagggttttaaatttcgaaattgctatttctgtcgaggacactgaaattttagaaatttcgaatttttttgaccgaaattatttaaaagtttaactgattttgaatgaatttgaatacaatttgacaaattcacaaaaaaattgtaaaaaaacgaaaatttcgggcgagatatgagcttgccggtgggagggcaaaattaacgaaatttcagaaattttgcaacgaaatttcaaaccctagccgcaggtgtcgccggtaatgagggtcctcttgctggccgaggggccatcttcccgcatcgccgctggccatggccttagtactgtggttcctctttgctctagctatggcaatcctgtcccatctgtttgcaggaaggatgggggtattttgcgaagaagtcctatatcggatctgttcttcagaaaaaactcttcgaaaatatatactgtaaagtttatatagtgtacaaacctagaaactaacattggataaaaattggacatataagatttattcacatcactcttagtaaatttttcactatttttaaTttttttattaagagtataaattttactcacgataatgtggagaaatttcatacgtctattttttcatataacgattgttttatatttacactacttatcggtagttattcggttgttttgtgaaaagatcagaacacggtaagcctgtaatgatcagaaattttcacataaggtctccagactcgggagtccggccgctatgatcgatagcggtccggtctctactactctctccgtttcacaatgtaagtcattttagcattttccacattcatattaatgttaaagaatctagacATatatatatatatatatatatatctatttagattcattaacatcaatatgaatgtgaaaaatgttagaatgacttacattgtgaaacggagaaagtatcaagcttcctccggatgaaccgtgggatgctggtcagagagagttagcctggagcgttggccagttcggacttcggaggatacaaaaaagtatctaaattcacaacacaaccattctattcatgtcttcttcaccagcaacatctgttcaatctccaaataataataataataaagAaaaaaacctaattaaacaacatcttcagttcacctgcctttagcgaggcttcggttggctttgtctgtaagagcttggtcgatcgctgctgtaatcgctgctagtgtttccctgactccccggcgctcttcttgatcgtggcccgatggactcacccgattccatgatggaactgtaggtatcttctgcgtacgtagtcctaaatatagagtttagatcttctccatgcgtttgtccttgcaagtgcttcaggatctgaaaggagaaaaggaacttcttgtcacatataggagtatcaaatatcagttatttggttatgtagttattgttctattttattctggaacaaggcactaccactacttgtacagttgtactgaaggtttagcagtttcggtgtttcaaactcaaaacttttcagggaaggaaacgaacctgaaccatggatggacgcagatgtgctgattggcgcacggcagcggcggcacactccatcattcgcatcattttgttttcatcataatcatctccaatatccggatcaacaaggatatcaaagttgccttcctccatagcttctgaaatcaagggttttgcctgaagaagcaaattcagaaatgttctatcaggctagacatcaaagttcctcttagaactacatttattggagtgaaggaaatgtattagatgtcaaggaatgaattttgtcaagattcaagaacttctttttgttagaaactgacccaaccaactaacgtgctgtccatgtaagactcggatgactgaaccggcagccttccagttatcagttccaagaggacgacaccaaaagcaaagacatcggctttgtcagtaagtttcccgctagacaggaactctggagcaatgtacctgcagaaaagaggatttgctatgaatacaatgagggataatatatacttgtgctatagatattcatgttcagaaattagaatgaacaaactcggaatacatagggaatgctgaagagaagtactgacccaaatgtgcccattattcttgtggaaacatgggtgtggtttcctggttgctactttgctagaccaaaatctgcaacctgcaaaggatcaagacatactgagtataggactgtgcaatataatggcatattgtttgcaattcaaacttgtcctgggattgcttcAaaaaaaaaaaacttgtcctgggaaaaccagatcttcttgaaacgttgaataatatgtgcagagagagtaccttgggctcaaaaccatgatccagaagaatattggatgccttgacatcacgatgtataattttaggagaacctgaatagtataaacggactttttcgtattaaatcacagttcaacactagatacgaaactgaatataagtgtataacgcgaaatggatgggtggagtagaactaacagtcatcgtgtagataggccaaaccccttgcagatcccacagcaattttccatctttgctgccaatccagaggtggccacttgtcccctgaattaagttcaacagtaacatgatcagatcagagtaaaaaaccaagactaaaaatacattgactaaacagtcaacggatgcatttgacagaagaaaaaacaaatatgtaaaccattattttttttattcattttagatgtagacataggttttataccgtgtaaatgcgtgtcgagcgtcttgttggggacgaactcgtaaaccagcagcctgtcgttgccggagatgcagtatccgacgagggagacgaggttcctgtggtgcacgcgtgtgatgatgtccgcctcggcgcggaactccgtcttgagcttcttgatcgccacctcggtgccgtcctgcagcctccccctgtacacgcacccgaatccgccctgcccgatgacgttgtcgggggagaacccgcccgtcgcggcggccagctggtcgtacgagagcgagccgccgtcgatggagatggagtgcgggcgctcggagccggcgtcggagaacgtgccgccgctggtctgcggcgccgtcgggtggtgctgctgctgctgcatgaagacgaatggcagcggcggctggtcacctgcaagcaccaaagtgtggtggatatctccgacgacgacgacgacatggacgtacgtacgtacacgacgtcgaacgtgacaagaatcacaagatgcgcgcacctttgtagtaggggttggggttgtataacattggcggtggtagcggaagcggctgggcctgttgccgccgccgccgccgcctccatcgccggatccagagcgcgagcacgcacaagcccaaaaccagaccgacaaccccagcggccactttgacggccacggaattcaagaacgagggcgagcccgtctggggtgccgcgggtgccgggtcggacgccggggccgtcgtgatgatctcggtcacggcacggcgtgctctctgcccgtggccggaggagatgacgacgacaccatgcaccgtcgtcggtccaccggtgatggtcaccagggcggccttggcgcgatccaccacgtcatagagcctcgcgaaagctgaaggctcttcaGggggggtacatactaaggcggtgggggtacgaacgttgccggccgtgccatctcggccggttgggaataccggaaacgcgcccacatcaccccgtctgcggttgtg
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| CDS seq | atgttatacaaccccaacccctactacaaaggtgaccagccgccgctgccattcgtcttcatgcagcagcagcagcaccacccgacggcgccgcagaccagcggcggcacgttctccgacgccggctccgagcgcccgcactccatctccatcgacggcggctcgctctcgtacgaccagctggccgccgcgacgggcgggttctcccccgacaacgtcatcgggcagggcggattcgggtgcgtgtacagggggaggctgcaggacggcaccgaggtggcgatcaagaagctcaagacggagttccgcgccgaggcggacatcatcacacgcgtgcaccacaggaacctcgtctccctcgtcggatactgcatctccggcaacgacaggctgctggtttacgagttcgtccccaacaagacgctcgacacgcatttacacggggacaagtggccacctctggattggcagcaaagatggaaaattgctgtgggatctgcaaggggtttggcctatctacacgatgactgttctcctaaaattatacatcgtgatgtcaaggcatccaatattcttctggatcatggttttgagcccaaggtactctctctgcacatattattcaacgtttcaagaagatctggttttcccaggacaagttgcagattttggtctagcaaagtagcaaccaggaaaccacacccatgtttccacaagaataatgggcacatttggcacaagtatatattatccctcattgtattcatagcaaatcctcttttctgcaggtacattgctccagagttcctgtctagcgggaaacttactgacaaagccgatgtctttgcttttggtgtcgtcctcttggaactgataactggaaggctgccggttcagtcatccgagtcttacatggacagcacgttagttggttgggcaaaacccttgatttcagaagctatggaggaaggcaactttgatatccttgttgatccggatattggagatgattatgatgaaaacaaaatgatgcgaatgatggagtgtgccgccgctgccgtgcgccaatcagcacatctgcgtccatccatggttcagaagatacctacagttccatcatggaatcgggtgagtccatcgggccacgatcaagaagagcgccggggagtcagggaaacactagcagcgattacagcagcgatcgaccaagctcttacagacaaagccaaccgaagcctcgctaaaggcaggcgtgtggtggtggacgagttggcggcgctgggggcggccgtgcatacctgctccaggaacgaggccgagccgggcgagcgcctcagggagtgggagggcagggggttccgcgtcaccggctcagtccgcgacgtctccgtccgggaccagccggaacgcatgctccgcgaggtcgccagcctctacggtggcaagctcgacatccttgtaaaacacttcacagcttctcttcccccatcttcaattcaactccttgcttcccctcctaggtgtggccatgattga
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| Protein seq | MLYNPNPYYKGDQPPLPFVFMQQQQHHPTAPQTSGGTFSDAGSERPHSISIDGGSLSYDQLAAATGGFSPDNVIGQGGFGCVYRGRLQDGTEVAIKKLKTEFRAEADIITRVHHRNLVSLVGYCISGNDRLLVYEFVPNKTLDTHLHGDKWPPLDWQQRWKIAVGSARGLAYLHDDCSPKIIHRDVKASNILLDHGFEPKVLSLHILFNVSRRSGFPRTSCRFWSSKVATRKPHPCFHKNNGHIWHKYILSLIVFIANPLFCRYIAPEFLSSGKLTDKADVFAFGVVLLELITGRLPVQSSESYMDSTLVGWAKPLISEAMEEGNFDILVDPDIGDDYDENKMMRMMECAAAAVRQSAHLRPSMVQKIPTVPSWNRVSPSGHDQEERRGVRETLAAITAAIDQALTDKANRSLAKGRRVVVDELAALGAAVHTCSRNEAEPGERLREWEGRGFRVTGSVRDVSVRDQPERMLREVASLYGGKLDILVKHFTASLPPSSIQLLASPPRCGHD |
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| Function | Proline-rich receptor-like protein kinase PERK1 [UniProtKB/Swiss-Prot:Q9LV48] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_09g0005360 | OsNaBo_09g0005360.02 | Chr09 | 8915049 | 8919262 | - | NAM | ||
| CDS seq | atgttatacaaccccaacccctactacaaaggtgaccagccgccgctgccattcgtcttcatgcagcagcagcagcaccacccgacggcgccgcagaccagcggcggcacgttctccgacgccggctccgagcgcccgcactccatctccatcgacggcggctcgctctcgtacgaccagctggccgccgcgacgggcgggttctcccccgacaacgtcatcgggcagggcggattcgggtgcgtgtacagggggaggctgcaggacggcaccgaggtggcgatcaagaagctcaagacggagttccgcgccgaggcggacatcatcacacgcgtgcaccacaggaacctcgtctccctcgtcggatactgcatctccggcaacgacaggctgctggtttacgagttcgtccccaacaagacgctcgacacgcatttacacggggacaagtggccacctctggattggcagcaaagatggaaaattgctgtgggatctgcaaggggtttggcctatctacacgatgactgttctcctaaaattatacatcgtgatgtcaaggcatccaatattcttctggatcatggttttgagcccaaggtactctctctgcacatattattcaacgtttcaagaagatctggttttcccaggacaagttgcagattttggtctagcaaagtagcaaccaggaaaccacacccatgtttccacaagaataatgggcacatttggcacaagtatatattatccctcattgtattcatagcaaatcctcttttctgcaggtacattgctccagagttcctgtctagcgggaaacttactgacaaagccgatgtctttgcttttggtgtcgtcctcttggaactgataactggaaggctgccggttcagtcatccgagtcttacatggacagcacgttagttggttgggcaaaacccttgatttcagaagctatggaggaaggcaactttgatatccttgttgatccggatattggagatgattatgatgaaaacaaaatgatgcgaatgatggagtgtgccgccgctgccgtgcgccaatcagcacatctgcgtccatccatggttcagaagatacctacagttccatcatggaatcgggtgagtccatcgggccacgatcaagaagagcgccggggagtcagggaaacactagcagcgattacagcagcgatcgaccaagctcttacagacaaagccaaccgaagcctcgctaaaggcaggcgtgtggtggtggacgagttggcggcgctgggggcggccgtgcatacctgctccaggaacgaggccgagccgggcgagcgcctcagggagtgggagggcagggggttccgcgtcaccggctcagtccgcgacgtctccgtccgggaccagccggaacgcatgctccgcgaggtcgccagcctctacggtggcaagctcgacatccttgtaaaacacttcacagcttctcttcccccatcttcaattcaactccttgcttcccctcctaggtgtggccatgattga
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| Protein seq | MLYNPNPYYKGDQPPLPFVFMQQQQHHPTAPQTSGGTFSDAGSERPHSISIDGGSLSYDQLAAATGGFSPDNVIGQGGFGCVYRGRLQDGTEVAIKKLKTEFRAEADIITRVHHRNLVSLVGYCISGNDRLLVYEFVPNKTLDTHLHGDKWPPLDWQQRWKIAVGSARGLAYLHDDCSPKIIHRDVKASNILLDHGFEPKVLSLHILFNVSRRSGFPRTSCRFWSSKVATRKPHPCFHKNNGHIWHKYILSLIVFIANPLFCRYIAPEFLSSGKLTDKADVFAFGVVLLELITGRLPVQSSESYMDSTLVGWAKPLISEAMEEGNFDILVDPDIGDDYDENKMMRMMECAAAAVRQSAHLRPSMVQKIPTVPSWNRVSPSGHDQEERRGVRETLAAITAAIDQALTDKANRSLAKGRRVVVDELAALGAAVHTCSRNEAEPGERLREWEGRGFRVTGSVRDVSVRDQPERMLREVASLYGGKLDILVKHFTASLPPSSIQLLASPPRCGHD
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_09g0005360 | OsNaBo_09g0005360.01 | Chr09 | 8915049 | 8919262 | - | NAM | ||
| CDS seq | atgttatacaaccccaacccctactacaaaggtgaccagccgccgctgccattcgtcttcatgcagcagcagcagcaccacccgacggcgccgcagaccagcggcggcacgttctccgacgccggctccgagcgcccgcactccatctccatcgacggcggctcgctctcgtacgaccagctggccgccgcgacgggcgggttctcccccgacaacgtcatcgggcagggcggattcgggtgcgtgtacagggggaggctgcaggacggcaccgaggtggcgatcaagaagctcaagacggagttccgcgccgaggcggacatcatcacacgcgtgcaccacaggaacctcgtctccctcgtcggatactgcatctccggcaacgacaggctgctggtttacgagttcgtccccaacaagacgctcgacacgcatttacacggggacaagtggccacctctggattggcagcaaagatggaaaattgctgtgggatctgcaaggggtttggcctatctacacgatgactgttctcctaaaattatacatcgtgatgtcaaggcatccaatattcttctggatcatggttttgagcccaaggttgcagattttggtctagcaaagtacattgctccagagttcctgtctagcgggaaacttactgacaaagccgatgtctttgcttttggtgtcgtcctcttggaactgataactggaaggctgccggttcagtcatccgagtcttacatggacagcacgttagttggttgggcaaaacccttgatttcagaagctatggaggaaggcaactttgatatccttgttgatccggatattggagatgattatgatgaaaacaaaatgatgcgaatgatggagtgtgccgccgctgccgtgcgccaatcagcacatctgcgtccatccatggttcagaagatacctacagttccatcatggaatcgggtgagtccatcgggccacgatcaagaagagcgccggggagtcagggaaacactagcagcgattacagcagcgatcgaccaagctcttacagacaaagccaaccgaagcctcgctaaaggcaggcgtgtggtggtggacgagttggcggcgctgggggcggccgtgcatacctgctccaggaacgaggccgagccgggcgagcgcctcagggagtgggagggcagggggttccgcgtcaccggctcagtccgcgacgtctccgtccgggaccagccggaacgcatgctccgcgaggtcgccagcctctacggtggcaagctcgacatccttgtaaaacacttcacagcttctcttcccccatcttcaattcaactccttgcttcccctcctaggtgtggccatgattga
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| Protein seq | MLYNPNPYYKGDQPPLPFVFMQQQQHHPTAPQTSGGTFSDAGSERPHSISIDGGSLSYDQLAAATGGFSPDNVIGQGGFGCVYRGRLQDGTEVAIKKLKTEFRAEADIITRVHHRNLVSLVGYCISGNDRLLVYEFVPNKTLDTHLHGDKWPPLDWQQRWKIAVGSARGLAYLHDDCSPKIIHRDVKASNILLDHGFEPKVADFGLAKYIAPEFLSSGKLTDKADVFAFGVVLLELITGRLPVQSSESYMDSTLVGWAKPLISEAMEEGNFDILVDPDIGDDYDENKMMRMMECAAAAVRQSAHLRPSMVQKIPTVPSWNRVSPSGHDQEERRGVRETLAAITAAIDQALTDKANRSLAKGRRVVVDELAALGAAVHTCSRNEAEPGERLREWEGRGFRVTGSVRDVSVRDQPERMLREVASLYGGKLDILVKHFTASLPPSSIQLLASPPRCGHD
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| A5 | Chr09 | 8917673 | 8917832 | - | OsNaBo_09g0005360.02 | OsNaBo_09g0005360.02,OsNaBo_09g0005360.01 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_09g0314800 | RBH | 0.0 | 0.0 | 0.228829 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os09g14570 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os09g0314800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0024620 | SBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0024420 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_09g0016630 | SBH | 0.480213 | 30.749866 | 15.681616 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_09g0005210 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_09g0005420 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_09G0153000 | RBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_09g0005580 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_09G0116700 | SBH | 0.575834 | 17.004757 | 2.1546675 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0024290 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0024330 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0024400 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0024170 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_09g0016260 | SBH | 0.406488 | 19.943939 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_09G016470 | SBH | 0.187914 | 1.138397 | 2.094473 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_08g0013350 | SBH | 0.0 | 0.0 | 0.361986 |
