Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsZS97_09G0116700 | OGI:09021590 | 16/16 | Zhenshan 97 | ZS97RS3 | HZAU | Chr09:6989703-6993347 | ||||||||
| Gene Symbol | BRL1, OsBRL1 | ||||||||||
| DNA seq | TTACATTGATTTCTCTCCTGACTCATCTATAGTTGACGAATTGATCGAAAAGCCATCGAGGATATCACTGTCCGAGTCAAGCTGCAGCTCTTTGAACATTGCCATGACCTGAATCATGGTTGGCCTTCGGTTGGGTCGATCATCCAAGCACTCGCATGCAATCTTCAGGTACTGATAGAGCTCTGCTTCCCCTGATTTTCTATCAGTCAATGTAGGATCAAAGATCTCACTGCTTCTGTTCTCTTTAACCATCTGCTTCACCCAACCAACAAGGTTGTTGTCTCCAAACTCAGTCGGATCAATTGGCTTCTTACCTGAGAGGAGCTCCAAGAGCACAACACCATAGCTGTAGACGTCGCCTTTGGTCGTGCACCTGAAGCTTTGGTAGTACTCAGGTGGCACATACCCAGGTGTACCTGCAAGTGTGCTCACACTCAGATGCGTATCAAGCGCATTCATCAGCCTTGCCATCCCGAAATCCGATACACGGGCATCGAGGTTGTTGTCAAGAAGCACATTGCTCGACTTCATGTCCCGGTGTATGATGTGTGGGATGCAGCTGTGGTGGAGGAATGCGAGGCCCCTGGCTGAACCAATTGCAATTTTCTTTCTTGCTGACCAGTCAAGCTTCACACTAGCCTTGGCCTTGTCATGGAGCACAACATCCAGGCTGCCGTGTTTCATGTACTCGTAGACAAGGAGCCTCTCATCACCAATCTTGCAATATCCAAGCAATGGGACAAGGTTGCGGTGCTTGATCTTTCCAATGGTCTCCATCTCTGCAGTGAATTCCCGGTCACCTTGGCCAGTGAAGTGAATCAGTTTCTTGATGGCCACAACACTGCCATCCTTGAGCTTGGCCTTGTATACCTCACCAAATCCCCCTGATCCAATGAGAGTCTCAGCACTGAATCCATTGGTGGCCTCAAGGAGGTGTGCAAATGTGAGCTTCCTCAGCGGCTTCTCGAATGTCGCCACATTGATGCTTAGCGGCTCACGGACACCCGACAGCTTCCAACTCGATGTTCCAGATGTTGGAAGGCTCTCAACATACCCAGTTCTCACCTCTTCAGTCTTCTGGTTCATCCTGAGCTTGCAGAGAGTGACCAGCAGCAGGAGCAGTATGAGCACGGAGAGTGCCACCCCGACAAGAATGCTCGCCCCAATCACCTTCCTCTTCCCATCAGGCGAACCGCGTGGCCTACCTCCCCATGGGGGATTGTGGCCACAAGGAGGCAAAGGGATGCCACAGAGACCATTGTTGTTGTCGTACCGGGATGGCGGGAACGTGGTGAGCTGCCCGGATGAAGGGATTGGACCAGTCAGGTTGTTGTTGGAGACATCAAAATCTGCAAGGAAATTCAAACCACCAAGGCCTGGAGGAATGCCACCACTGAGCTGATTGTTTGAGAGATCGAGTGCGCCGATCGACTTGAGGTTCTGAAATGCATCCGGTATTGTGCCATTGAGCTCATTGTGCCCCAAGTTAAGGACCTGAAGATACATCATGTTTCCAAGACTTCCTGGGATTGTGCCGGTGAGGCCATTGTATGAGAGATCAAGGAAGATCATACTCCCATTGTTGGTGAATGTATAAACCGTCGTGCCCGTGTAAATCCTTGTGGATGGGCACAGATGCACTGCAGGGAACTCAGCCAACCGCTCTGGCCTGATGCCAAAGAACTCAAAGAGAACACCGGCACCAGGGCATATGTTGCCAGCCTCATTCCGGAGAAATGCAAACTGCTTTCCTGACACAATACCTCCCGGAACAAGCCCTGCCTGGCCTGCCAACTGCGGCGGTATCGTCCCGGTGAAGCTGTTGCTGTTGAGATCAAGCCAGATGAGGTTGTTGCAGCTGCCAAGCTCTGCTGGAACATGTCCAGATAGCAGATTCTTGTTGAGTTGCAGAATGGCAAGCTTCTGAAGCTTGCCGAATCCACCGGGCACGCTCCCGGTAAGACGGTTACCGGAAAGCGACACCCAGATGAGATTCACACACTTTGTAATGGATCTTGGAATGCTTCCGGTGAAGTTGTTGTAGCTTATCACCAATGTCTCCAATGTGGTGCCATTGGAGCAGAGAACATCCGGTATCTCACCGGATAGGCCATTCGCCCACATGACCAGATCAACGATCTTTGGAAGCCTGATTATCTCTGTTGGGATCTTGCCAACCAGCAGATTGAAGCTGAGATCAATGGACTCCAGATTGGCGCAATCGCCAAGCGAAGGCGGCACGGTGCCATTGAGGTAATTGTTCGGAAGGAGCAGCTTCCGCAACGATGGCAACGACGAGCAAAGATCCGGCATTATCTCCCCATCGAGCTCATTGGACCCAAGATCAATCACCTCCAGCAATGGACACCCCGCTGCGAGCACCGGCAGCGGGTTTACACCGGTGATGTTGTTGAACGACAGCCGCAGCTCACGCAGCGAGGCGATGGTGCTGACGACACTGGCCACAAAGTCGCCGGCGAGCTGGTTGCCACCGAGGTCGAGCACCTCAAGAGACTTGCACTTTGCAAAGCTCGCCGGCAAGGCACCAACCAGCCGGTTGCTGGATAAGTCCAGCTCAACAATTCTGCCACACAATTGCCCCAGCTCCACCGGAATCGCTCCGGTGAACTCGTTGCCGGCCAATGCCAGCCGCCTCAGCGACGAGAAGCCGACCAAGAATGTCGGCAGCGCGCCAGAGAGGAGCTTGTTCCCGGACATCTCCAGCGTCTCGAGGCGGCGGCAGTTGATGAGCCCCGGTGGCAACCTGGTGCTACTTAGGCCATTGTAGGACCAGTCGAGCACCGTGAGGTTGGCGCACCCGCCGAAGTCGTAGCCGGAGACATCGCCGGTGAAGTTGTTGCCGGCGATGTTGAGGTACGTCAGGTTGGCCGGCGCGGTGGCCACGAGCCCCGGCGGGAGCCCGCCGGACATGTGGTTCCACGACACGTCGAGCGTGGTCACCGCGCTGCACGCGGCGAGCTCCGGCAGCCGCCCGGCGAAGAGGTTGGCGGAGAGGTTGAGGTAGCCGACGCCGTGGCAGCCGGCGAAGGAGTAGTTGAGCAGGCCGGCGTCGGCGAGGCGGTTGCGCGACAGGTCCAGCGACCGCAGCGACGGCGCGAACGGGAACCCGCCGCCGGCGAGGCCGTTCCTCGACAGGTTCACGGACCGCAGCACGCCGCACGGCGCCAGGAACGACGGCGGCAGCGTCCCGTTCAAGGCGTTCGACGAGATGTCCACCTCCACGAGCGCGCACGGCGGCGACGGCGCGGCGTGCGAGAGGTTGCCGTAGAAGGCATTGCCGCGGAGATTGAGGCGCTGCAGCGCCGGGAGCGCGAGGAGCGCGTCGAGCCGCAGCTCGCCGGCGAGGCTCATGCCGCTGAGGTCGACGGCGGCGACGCGGCCGTCGGGCGGCGGCGCGCACGACACGCCGTCCCACGAGCACGGCGCGGTGGAGTTGGCGCCGCCGGCGCCCAGCACCCAGCTCGCCAGCGCGCCGTCCGGGTCGTCCGCCACGGACGCGCGCCTGAAGGCCAGCAGCGCCGCCGCCTCCTCGCCGACGGCAATGGCGGGAGCCGGCGCCCGAAACAGCACCACCACAAGCGTAAGGAACGCCGCGGCCGCCATGAACGGCGGCGAGGCGGCCAT
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| CDS seq | ATGGCCGCCTCGCCGCCGTTCATGGCGGCCGCGGCGTTCCTTACGCTTGTGGTGGTGCTGTTTCGGGCGCCGGCTCCCGCCATTGCCGTCGGCGAGGAGGCGGCGGCGCTGCTGGCCTTCAGGCGCGCGTCCGTGGCGGACGACCCGGACGGCGCGCTGGCGAGCTGGGTGCTGGGCGCCGGCGGCGCCAACTCCACCGCGCCGTGCTCGTGGGACGGCGTGTCGTGCGCGCCGCCGCCCGACGGCCGCGTCGCCGCCGTCGACCTCAGCGGCATGAGCCTCGCCGGCGAGCTGCGGCTCGACGCGCTCCTCGCGCTCCCGGCGCTGCAGCGCCTCAATCTCCGCGGCAATGCCTTCTACGGCAACCTCTCGCACGCCGCGCCGTCGCCGCCGTGCGCGCTCGTGGAGGTGGACATCTCGTCGAACGCCTTGAACGGGACGCTGCCGCCGTCGTTCCTGGCGCCGTGCGGCGTGCTGCGGTCCGTGAACCTGTCGAGGAACGGCCTCGCCGGCGGCGGGTTCCCGTTCGCGCCGTCGCTGCGGTCGCTGGACCTGTCGCGCAACCGCCTCGCCGACGCCGGCCTGCTCAACTACTCCTTCGCCGGCTGCCACGGCGTCGGCTACCTCAACCTCTCCGCCAACCTCTTCGCCGGGCGGCTGCCGGAGCTCGCCGCGTGCAGCGCGGTGACCACGCTCGACGTGTCGTGGAACCACATGTCCGGCGGGCTCCCGCCGGGGCTCGTGGCCACCGCGCCGGCCAACCTGACGTACCTCAACATCGCCGGCAACAACTTCACCGGCGATGTCTCCGGCTACGACTTCGGCGGGTGCGCCAACCTCACGGTGCTCGACTGGTCCTACAATGGCCTAAGTAGCACCAGGTTGCCACCGGGGCTCATCAACTGCCGCCGCCTCGAGACGCTGGAGATGTCCGGGAACAAGCTCCTCTCTGGCGCGCTGCCGACATTCTTGGTCGGCTTCTCGTCGCTGAGGCGGCTGGCATTGGCCGGCAACGAGTTCACCGGAGCGATTCCGGTGGAGCTGGGGCAATTGTGTGGCAGAATTGTTGAGCTGGACTTATCCAGCAACCGGCTGGTTGGTGCCTTGCCGGCGAGCTTTGCAAAGTGCAAGTCTCTTGAGGTGCTCGACCTCGGTGGCAACCAGCTCGCCGGCGACTTTGTGGCCAGTGTCGTCAGCACCATCGCCTCGCTGCGTGAGCTGCGGCTGTCGTTCAACAACATCACCGGTGTAAACCCGCTGCCGGTGCTCGCAGCGGGGTGTCCATTGCTGGAGGTGATTGATCTTGGGTCCAATGAGCTCGATGGGGAGATAATGCCGGATCTTTGCTCGTCGTTGCCATCGTTGCGGAAGCTGCTCCTTCCGAACAATTACCTCAATGGCACCGTGCCGCCTTCGCTTGGCGATTGCGCCAATCTGGAGTCCATTGATCTCAGCTTCAATCTGCTGGTTGGCAAGATCCCAACAGAGATAATCAGGCTTCCAAAGATCGTTGATCTGGTCATGTGGGCGAATGGCCTATCCGGTGAGATACCGGATGTTCTCTGCTCCAATGGCACCACATTGGAGACATTGGTGATAAGCTACAACAACTTCACCGGAAGCATTCCAAGATCCATTACAAAGTGTGTGAATCTCATCTGGGTGTCGCTTTCCGGTAACCGTCTTACCGGGAGCGTGCCCGGTGGATTCGGCAAGCTTCAGAAGCTTGCCATTCTGCAACTCAACAAGAATCTGCTATCTGGACATGTTCCAGCAGAGCTTGGCAGCTGCAACAACCTCATCTGGCTTGATCTCAACAGCAACAGCTTCACCGGGACGATACCGCCGCAGTTGGCAGGCCAGGCAGGGCTTGTTCCGGGAGGTATTGTGTCAGGAAAGCAGTTTGCATTTCTCCGGAATGAGGCTGGCAACATATGCCCTGGTGCCGGTGTTCTCTTTGAGTTCTTTGGCATCAGGCCAGAGCGGTTGGCTGAGTTCCCTGCAGTGCATCTGTGCCCATCCACAAGGATTTACACGGGCACGACGGTTTATACATTCACCAACAATGGGAGTATGATCTTCCTTGATCTCTCATACAATGGCCTCACCGGCACAATCCCAGGAAGTCTTGGAAACATGATGTATCTTCAGGTCCTTAACTTGGGGCACAATGAGCTCAATGGCACAATACCGGATGCATTTCAGAACCTCAAGTCGATCGGCGCACTCGATCTCTCAAACAATCAGCTCAGTGGTGGCATTCCTCCAGGCCTTGGTGGTTTGAATTTCCTTGCAGATTTTGATGTCTCCAACAACAACCTGACTGGTCCAATCCCTTCATCCGGGCAGCTCACCACGTTCCCGCCATCCCGGTACGACAACAACAATGGTCTCTGTGGCATCCCTTTGCCTCCTTGTGGCCACAATCCCCCATGGGGAGGTAGGCCACGCGGTTCGCCTGATGGGAAGAGGAAGGTGATTGGGGCGAGCATTCTTGTCGGGGTGGCACTCTCCGTGCTCATACTGCTCCTGCTGCTGGTCACTCTCTGCAAGCTCAGGATGAACCAGAAGACTGAAGAGGTGAGAACTGGGTATGTTGAGAGCCTTCCAACATCTGGAACATCGAGTTGGAAGCTGTCGGGTGTCCGTGAGCCGCTAAGCATCAATGTGGCGACATTCGAGAAGCCGCTGAGGAAGCTCACATTTGCACACCTCCTTGAGGCCACCAATGGATTCAGTGCTGAGACTCTCATTGGATCAGGGGGATTTGGTGAGGTATACAAGGCCAAGCTCAAGGATGGCAGTGTTGTGGCCATCAAGAAACTGATTCACTTCACTGGCCAAGGTGACCGGGAATTCACTGCAGAGATGGAGACCATTGGAAAGATCAAGCACCGCAACCTTGTCCCATTGCTTGGATATTGCAAGATTGGTGATGAGAGGCTCCTTGTCTACGAGTACATGAAACACGGCAGCCTGGATGTTGTGCTCCATGACAAGGCCAAGGCTAGTGTGAAGCTTGACTGGTCAGCAAGAAAGAAAATTGCAATTGGTTCAGCCAGGGGCCTCGCATTCCTCCACCACAGCTGCATCCCACACATCATACACCGGGACATGAAGTCGAGCAATGTGCTTCTTGACAACAACCTCGATGCCCGTGTATCGGATTTCGGGATGGCAAGGCTGATGAATGCGCTTGATACGCATCTGAGTGTGAGCACACTTGCAGGTACACCTGGGTATGTGCCACCTGAGTACTACCAAAGCTTCAGGTGCACGACCAAAGGCGACGTCTACAGCTATGGTGTTGTGCTCTTGGAGCTCCTCTCAGGTAAGAAGCCAATTGATCCGACTGAGTTTGGAGACAACAACCTTGTTGGTTGGGTGAAGCAGATGGTTAAAGAGAACAGAAGCAGTGAGATCTTTGATCCTACATTGACTGATAGAAAATCAGGGGAAGCAGAGCTCTATCAGTACCTGAAGATTGCATGCGAGTGCTTGGATGATCGACCCAACCGAAGGCCAACCATGATTCAGGTCATGGCAATGTTCAAAGAGCTGCAGCTTGACTCGGACAGTGATATCCTCGATGGCTTTTCGATCAATTCGTCAACTATAGATGAGTCAGGAGAGAAATCAATGTAA
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| Protein seq | MAASPPFMAAAAFLTLVVVLFRAPAPAIAVGEEAAALLAFRRASVADDPDGALASWVLGAGGANSTAPCSWDGVSCAPPPDGRVAAVDLSGMSLAGELRLDALLALPALQRLNLRGNAFYGNLSHAAPSPPCALVEVDISSNALNGTLPPSFLAPCGVLRSVNLSRNGLAGGGFPFAPSLRSLDLSRNRLADAGLLNYSFAGCHGVGYLNLSANLFAGRLPELAACSAVTTLDVSWNHMSGGLPPGLVATAPANLTYLNIAGNNFTGDVSGYDFGGCANLTVLDWSYNGLSSTRLPPGLINCRRLETLEMSGNKLLSGALPTFLVGFSSLRRLALAGNEFTGAIPVELGQLCGRIVELDLSSNRLVGALPASFAKCKSLEVLDLGGNQLAGDFVASVVSTIASLRELRLSFNNITGVNPLPVLAAGCPLLEVIDLGSNELDGEIMPDLCSSLPSLRKLLLPNNYLNGTVPPSLGDCANLESIDLSFNLLVGKIPTEIIRLPKIVDLVMWANGLSGEIPDVLCSNGTTLETLVISYNNFTGSIPRSITKCVNLIWVSLSGNRLTGSVPGGFGKLQKLAILQLNKNLLSGHVPAELGSCNNLIWLDLNSNSFTGTIPPQLAGQAGLVPGGIVSGKQFAFLRNEAGNICPGAGVLFEFFGIRPERLAEFPAVHLCPSTRIYTGTTVYTFTNNGSMIFLDLSYNGLTGTIPGSLGNMMYLQVLNLGHNELNGTIPDAFQNLKSIGALDLSNNQLSGGIPPGLGGLNFLADFDVSNNNLTGPIPSSGQLTTFPPSRYDNNNGLCGIPLPPCGHNPPWGGRPRGSPDGKRKVIGASILVGVALSVLILLLLLVTLCKLRMNQKTEEVRTGYVESLPTSGTSSWKLSGVREPLSINVATFEKPLRKLTFAHLLEATNGFSAETLIGSGGFGEVYKAKLKDGSVVAIKKLIHFTGQGDREFTAEMETIGKIKHRNLVPLLGYCKIGDERLLVYEYMKHGSLDVVLHDKAKASVKLDWSARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDNNLDARVSDFGMARLMNALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVVLLELLSGKKPIDPTEFGDNNLVGWVKQMVKENRSSEIFDPTLTDRKSGEAELYQYLKIACECLDDRPNRRPTMIQVMAMFKELQLDSDSDILDGFSINSSTIDESGEKSM |
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| Function | Brassinosteroid LRR receptor kinase BRL1 [UniProtKB/Swiss-Prot:Q69JN6] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_09G0116700 | OsZS97_09T0116700.1 | Chr09 | 6989703 | 6993347 | - | makerRMon | ||
| CDS seq | ATGGCCGCCTCGCCGCCGTTCATGGCGGCCGCGGCGTTCCTTACGCTTGTGGTGGTGCTGTTTCGGGCGCCGGCTCCCGCCATTGCCGTCGGCGAGGAGGCGGCGGCGCTGCTGGCCTTCAGGCGCGCGTCCGTGGCGGACGACCCGGACGGCGCGCTGGCGAGCTGGGTGCTGGGCGCCGGCGGCGCCAACTCCACCGCGCCGTGCTCGTGGGACGGCGTGTCGTGCGCGCCGCCGCCCGACGGCCGCGTCGCCGCCGTCGACCTCAGCGGCATGAGCCTCGCCGGCGAGCTGCGGCTCGACGCGCTCCTCGCGCTCCCGGCGCTGCAGCGCCTCAATCTCCGCGGCAATGCCTTCTACGGCAACCTCTCGCACGCCGCGCCGTCGCCGCCGTGCGCGCTCGTGGAGGTGGACATCTCGTCGAACGCCTTGAACGGGACGCTGCCGCCGTCGTTCCTGGCGCCGTGCGGCGTGCTGCGGTCCGTGAACCTGTCGAGGAACGGCCTCGCCGGCGGCGGGTTCCCGTTCGCGCCGTCGCTGCGGTCGCTGGACCTGTCGCGCAACCGCCTCGCCGACGCCGGCCTGCTCAACTACTCCTTCGCCGGCTGCCACGGCGTCGGCTACCTCAACCTCTCCGCCAACCTCTTCGCCGGGCGGCTGCCGGAGCTCGCCGCGTGCAGCGCGGTGACCACGCTCGACGTGTCGTGGAACCACATGTCCGGCGGGCTCCCGCCGGGGCTCGTGGCCACCGCGCCGGCCAACCTGACGTACCTCAACATCGCCGGCAACAACTTCACCGGCGATGTCTCCGGCTACGACTTCGGCGGGTGCGCCAACCTCACGGTGCTCGACTGGTCCTACAATGGCCTAAGTAGCACCAGGTTGCCACCGGGGCTCATCAACTGCCGCCGCCTCGAGACGCTGGAGATGTCCGGGAACAAGCTCCTCTCTGGCGCGCTGCCGACATTCTTGGTCGGCTTCTCGTCGCTGAGGCGGCTGGCATTGGCCGGCAACGAGTTCACCGGAGCGATTCCGGTGGAGCTGGGGCAATTGTGTGGCAGAATTGTTGAGCTGGACTTATCCAGCAACCGGCTGGTTGGTGCCTTGCCGGCGAGCTTTGCAAAGTGCAAGTCTCTTGAGGTGCTCGACCTCGGTGGCAACCAGCTCGCCGGCGACTTTGTGGCCAGTGTCGTCAGCACCATCGCCTCGCTGCGTGAGCTGCGGCTGTCGTTCAACAACATCACCGGTGTAAACCCGCTGCCGGTGCTCGCAGCGGGGTGTCCATTGCTGGAGGTGATTGATCTTGGGTCCAATGAGCTCGATGGGGAGATAATGCCGGATCTTTGCTCGTCGTTGCCATCGTTGCGGAAGCTGCTCCTTCCGAACAATTACCTCAATGGCACCGTGCCGCCTTCGCTTGGCGATTGCGCCAATCTGGAGTCCATTGATCTCAGCTTCAATCTGCTGGTTGGCAAGATCCCAACAGAGATAATCAGGCTTCCAAAGATCGTTGATCTGGTCATGTGGGCGAATGGCCTATCCGGTGAGATACCGGATGTTCTCTGCTCCAATGGCACCACATTGGAGACATTGGTGATAAGCTACAACAACTTCACCGGAAGCATTCCAAGATCCATTACAAAGTGTGTGAATCTCATCTGGGTGTCGCTTTCCGGTAACCGTCTTACCGGGAGCGTGCCCGGTGGATTCGGCAAGCTTCAGAAGCTTGCCATTCTGCAACTCAACAAGAATCTGCTATCTGGACATGTTCCAGCAGAGCTTGGCAGCTGCAACAACCTCATCTGGCTTGATCTCAACAGCAACAGCTTCACCGGGACGATACCGCCGCAGTTGGCAGGCCAGGCAGGGCTTGTTCCGGGAGGTATTGTGTCAGGAAAGCAGTTTGCATTTCTCCGGAATGAGGCTGGCAACATATGCCCTGGTGCCGGTGTTCTCTTTGAGTTCTTTGGCATCAGGCCAGAGCGGTTGGCTGAGTTCCCTGCAGTGCATCTGTGCCCATCCACAAGGATTTACACGGGCACGACGGTTTATACATTCACCAACAATGGGAGTATGATCTTCCTTGATCTCTCATACAATGGCCTCACCGGCACAATCCCAGGAAGTCTTGGAAACATGATGTATCTTCAGGTCCTTAACTTGGGGCACAATGAGCTCAATGGCACAATACCGGATGCATTTCAGAACCTCAAGTCGATCGGCGCACTCGATCTCTCAAACAATCAGCTCAGTGGTGGCATTCCTCCAGGCCTTGGTGGTTTGAATTTCCTTGCAGATTTTGATGTCTCCAACAACAACCTGACTGGTCCAATCCCTTCATCCGGGCAGCTCACCACGTTCCCGCCATCCCGGTACGACAACAACAATGGTCTCTGTGGCATCCCTTTGCCTCCTTGTGGCCACAATCCCCCATGGGGAGGTAGGCCACGCGGTTCGCCTGATGGGAAGAGGAAGGTGATTGGGGCGAGCATTCTTGTCGGGGTGGCACTCTCCGTGCTCATACTGCTCCTGCTGCTGGTCACTCTCTGCAAGCTCAGGATGAACCAGAAGACTGAAGAGGTGAGAACTGGGTATGTTGAGAGCCTTCCAACATCTGGAACATCGAGTTGGAAGCTGTCGGGTGTCCGTGAGCCGCTAAGCATCAATGTGGCGACATTCGAGAAGCCGCTGAGGAAGCTCACATTTGCACACCTCCTTGAGGCCACCAATGGATTCAGTGCTGAGACTCTCATTGGATCAGGGGGATTTGGTGAGGTATACAAGGCCAAGCTCAAGGATGGCAGTGTTGTGGCCATCAAGAAACTGATTCACTTCACTGGCCAAGGTGACCGGGAATTCACTGCAGAGATGGAGACCATTGGAAAGATCAAGCACCGCAACCTTGTCCCATTGCTTGGATATTGCAAGATTGGTGATGAGAGGCTCCTTGTCTACGAGTACATGAAACACGGCAGCCTGGATGTTGTGCTCCATGACAAGGCCAAGGCTAGTGTGAAGCTTGACTGGTCAGCAAGAAAGAAAATTGCAATTGGTTCAGCCAGGGGCCTCGCATTCCTCCACCACAGCTGCATCCCACACATCATACACCGGGACATGAAGTCGAGCAATGTGCTTCTTGACAACAACCTCGATGCCCGTGTATCGGATTTCGGGATGGCAAGGCTGATGAATGCGCTTGATACGCATCTGAGTGTGAGCACACTTGCAGGTACACCTGGGTATGTGCCACCTGAGTACTACCAAAGCTTCAGGTGCACGACCAAAGGCGACGTCTACAGCTATGGTGTTGTGCTCTTGGAGCTCCTCTCAGGTAAGAAGCCAATTGATCCGACTGAGTTTGGAGACAACAACCTTGTTGGTTGGGTGAAGCAGATGGTTAAAGAGAACAGAAGCAGTGAGATCTTTGATCCTACATTGACTGATAGAAAATCAGGGGAAGCAGAGCTCTATCAGTACCTGAAGATTGCATGCGAGTGCTTGGATGATCGACCCAACCGAAGGCCAACCATGATTCAGGTCATGGCAATGTTCAAAGAGCTGCAGCTTGACTCGGACAGTGATATCCTCGATGGCTTTTCGATCAATTCGTCAACTATAGATGAGTCAGGAGAGAAATCAATGTAA
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| Protein seq | MAASPPFMAAAAFLTLVVVLFRAPAPAIAVGEEAAALLAFRRASVADDPDGALASWVLGAGGANSTAPCSWDGVSCAPPPDGRVAAVDLSGMSLAGELRLDALLALPALQRLNLRGNAFYGNLSHAAPSPPCALVEVDISSNALNGTLPPSFLAPCGVLRSVNLSRNGLAGGGFPFAPSLRSLDLSRNRLADAGLLNYSFAGCHGVGYLNLSANLFAGRLPELAACSAVTTLDVSWNHMSGGLPPGLVATAPANLTYLNIAGNNFTGDVSGYDFGGCANLTVLDWSYNGLSSTRLPPGLINCRRLETLEMSGNKLLSGALPTFLVGFSSLRRLALAGNEFTGAIPVELGQLCGRIVELDLSSNRLVGALPASFAKCKSLEVLDLGGNQLAGDFVASVVSTIASLRELRLSFNNITGVNPLPVLAAGCPLLEVIDLGSNELDGEIMPDLCSSLPSLRKLLLPNNYLNGTVPPSLGDCANLESIDLSFNLLVGKIPTEIIRLPKIVDLVMWANGLSGEIPDVLCSNGTTLETLVISYNNFTGSIPRSITKCVNLIWVSLSGNRLTGSVPGGFGKLQKLAILQLNKNLLSGHVPAELGSCNNLIWLDLNSNSFTGTIPPQLAGQAGLVPGGIVSGKQFAFLRNEAGNICPGAGVLFEFFGIRPERLAEFPAVHLCPSTRIYTGTTVYTFTNNGSMIFLDLSYNGLTGTIPGSLGNMMYLQVLNLGHNELNGTIPDAFQNLKSIGALDLSNNQLSGGIPPGLGGLNFLADFDVSNNNLTGPIPSSGQLTTFPPSRYDNNNGLCGIPLPPCGHNPPWGGRPRGSPDGKRKVIGASILVGVALSVLILLLLLVTLCKLRMNQKTEEVRTGYVESLPTSGTSSWKLSGVREPLSINVATFEKPLRKLTFAHLLEATNGFSAETLIGSGGFGEVYKAKLKDGSVVAIKKLIHFTGQGDREFTAEMETIGKIKHRNLVPLLGYCKIGDERLLVYEYMKHGSLDVVLHDKAKASVKLDWSARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDNNLDARVSDFGMARLMNALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVVLLELLSGKKPIDPTEFGDNNLVGWVKQMVKENRSSEIFDPTLTDRKSGEAELYQYLKIACECLDDRPNRRPTMIQVMAMFKELQLDSDSDILDGFSINSSTIDESGEKSM
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.575834 | 17.004757 | 2.1546675 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_09g0293500 | RBH | 0.0 | 0.087279 | 1.141069 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os09g12240 | RBH | 0.0 | 0.058348 | 0.291961 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os09g0293500 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_09g0004410 | RBH | 0.000000 | 16.838720 | 1.860261 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_09g0004440 | RBH | 0.0 | 3.649077 | 0.492325 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_09g0004460 | RBH | 0.000000 | 17.581905 | 0.849870 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_09g0004310 | RBH | 0.0 | 0.233855 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_09g0004370 | RBH | 0.488023 | 15.660146 | 4.357047 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_09G0123500 | RBH | 0.412926 | 28.566753 | 1.1889575 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_09g0004510 | RBH | 0.022590 | 1.693178 | 0.170080 |
| Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_09g0004470 | RBH | 0.0 | 0.310098 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_09g0004360 | RBH | 0.042426 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_09g0004420 | RBH | 0.000000 | 22.573561 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_09g0004240 | RBH | 0.0 | 0.0 | 0.160537 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_09g0004290 | RBH | 0.0 | 10.242428 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_09G004550 | RBH | 0.000000 | 1.554734 | 0.621094 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_09g0004400 | RBH | 0.000000 | 22.528725 | 0.725430 |
