Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsPr106_09g0005430 | OGI:09026240 | 5/16 | PR 106 | Os127742RS1 | Gramene(+IsoSeq) | Chr09:9590473-9593239 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ctaaattcacaacacaaccattctattcatgtcttcttcaccagcaacatctgttcaatctccaaataataataataataaagaaaaaaacctaattaaacaacatcttcagttcacctgcctttagcgaggcttcggttggctttgtctgtaagagcttggtcgatcgctgctgtaatcgctgctagtgtttccctgactccccggcgctcttcttgatcgtggcccgatggactcacccgattccatgatggaactgtaggtatcttctgcgtacgtagtcctaaatatagagtttagatcttctccatgcgtttgtccttgcaagtgcttcaggatctgaaaggagaaaaggaacttcttgtcacatataggagtatcaaatatcagttatttggttatgtagttattgttctattttattctggaacaaggcactaccactacttgtacagttgtactgaaggtttagcagtttcggtgtttcaaactcaaaacttttcagggaaggaaacgaacctgaaccatggatggacgcagatgtgctgattggcgcacggcagcggcggcacactccatcattcgcatcattttgttttcatcataatcatctccaatatccggatcaacaaggatatcaaagttgccttcctccatagcttctgaaatcaagggttttgcctgaagaagcaaattcagaaatgttctatcaggctagacatcaaagttcctcttagaactacatttattggagtgaaggaaatgtattagatgtcaaggaatgaattttgtcaagattcaagaacttctttttgttagaaactgacccaaccaactaacgtgctgtccatgtaagactcagatgactgaaccggcagccttccagttatcagttccaagaggacgacaccaaaagcaaagacatcggctttgtcagtaagcttcccgctagacaggaactctggagcaatgtacctgcagaaaagaggatttgctatgaatacaatgagggataatatatacttgtgctatagatattcatgttcagaaattagaatgaacaaactcggaatacatagggaatgctgaagagaagtactgacccaaatgtgcccattattcttgtggaaacatgggtgtggtttcctggttgctactttgctagaccaaaatctgcaacctgcaaaggatcaagacatactgagtataggactgtgcaatataatggcatattgtttgcaattcaaacttgtcctgggattgcttcaaaaaaaaaacttgtcctgggaaaaccagatcttcttgaaacgttgaataatatgtgcagagagagtaccttgggctcaaaaccatgatccagaagaatattggatgccttgacatcacgatgtataattttaggagaacctgaatagtataaacggactttttcgtattaaatcacagttcaacactagatacgaaactgaatataagtgtataacgcgaaatggatgggtggagtagaactaacagtcatcgtgtagataggccaaaccccttgcagatcccacagcaattttccatctttgctgccaatccagaggtggccacttgtcccctgaattaagttcaacagtaacatgatcagatcagagtaaaaaaccaagactaaaaaaacattgactaaacagtcaacggatgcatttgacagaagaaaaaacaaatatgtaaaccattattttttttattcattttagatgtagacataggttttataccgtgtaaatgcgtgtcgagcgtcttgttggggacgaactcgtaaaccagcagcctgtcgttgccggagatgcagtatccgacgagggagacgaggttcctgtggtgcacgcgtgtgatgatgtccgcctcggcgcggaactcgcggtcgccctgcttgctctccgtcttgagcttcttgatcgccacctcggtgccgtcctgcagcctccccctgtacacgcacccgaatccgccctgcccgatgacgttgtcgggggagaacccgcccgtcgcggcggccagctggtcgtacgagagcgagccgccgtcgatggagatggagtgcgggcgctcggagccggcgtcggagaacgtgccgccgctggtctgcggcgccgtcgggtggtggtgctgctgctgcatgaagacgaatggcagcggcggctggtcacctgcaagcaccaaagtgtggtggatatctccgacgacgacgacgacatggacgtacgtacgtacacgacgtcgaacgtgacaagaatcacaagatgcgcgcacctttgtagtaggggttggggttgtataacattggcggtggtagcggaagcggctgggcctgttgccgccgccgccgccgcctccatcgccggatccagagcgcgagcacgtacaagcccaaaaccagaccgacaaccccagcggccactttgacggccacggaattcaagaacgagggcgagcccgtctggggtgccgcgggtgccgggtcggacgccggggccgtcgtgatgatctcggtcacggcacggcgtgctctctgcccgtggccggaggagatgacgacgacaccatgcaccgtcgtcggtccaccggtgatggtcaccagggcggccttggcgcgatccaccacgtcatagagcctcgcgaaagctgaaggctcttcagggggtacatactgaggcggtgggggtacgaacgctgccggccgtgccatctcggccggttgggaataccggaaacgcgcccacat
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| CDS seq | atgtgggcgcgtttccggtattcccaaccggccgagatggcacggccggcagcgttcgtacccccaccgcctcagtatgtaccccctgaagagccttcagctttcgcgaggctctatgacgtggtggatcgcgccaaggccgccctggtgaccatcaccggtggaccgacgacggtgcatggtgtcgtcgtcatctcctccggccacgggcagagagcacgccgtgccgtgaccgagatcatcacgacggccccggcgtccgacccggcacccgcggcaccccagacgggctcgccctcgttcttgaattccgtggccgtcaaagtggccgctggggttgtcggtctggttttgggcttgtacgtgctcgcgctctggatccggcgatggaggcggcggcggcggcggcaacaggcccagccgcttccgctaccaccgccaatgttatacaaccccaacccctactacaaaggtgaccagccgccgctgccattcgtcttcatgcagcagcagcaccaccacccgacggcgccgcagaccagcggcggcacgttctccgacgccggctccgagcgcccgcactccatctccatcgacggcggctcgctctcgtacgaccagctggccgccgcgacgggcgggttctcccccgacaacgtcatcgggcagggcggattcgggtgcgtgtacagggggaggctgcaggacggcaccgaggtggcgatcaagaagctcaagacggagagcaagcagggcgaccgcgagttccgcgccgaggcggacatcatcacacgcgtgcaccacaggaacctcgtctccctcgtcggatactgcatctccggcaacgacaggctgctggtttacgagttcgtccccaacaagacgctcgacacgcatttacacggggacaagtggccacctctggattggcagcaaagatggaaaattgctgtgggatctgcaaggggtttggcctatctacacgatgactgttctcctaaaattatacatcgtgatgtcaaggcatccaatattcttctggatcatggttttgagcccaaggtactctctctgcacatattattcaacgtttcaagaagatctggttttcccaggacaagttgcagattttggtctagcaaagtagcaaccaggaaaccacacccatgtttccacaagaataatgggcacatttggcacaagtatatattatccctcattgtattcatagcaaatcctcttttctgcaggtacattgctccagagttcctgtctagcgggaagcttactgacaaagccgatgtctttgcttttggtgtcgtcctcttggaactgataactggaaggctgccggttcagtcatctgagtcttacatggacagcacgttagttggttgggcaaaacccttgatttcagaagctatggaggaaggcaactttgatatccttgttgatccggatattggagatgattatgatgaaaacaaaatgatgcgaatgatggagtgtgccgccgctgccgtgcgccaatcagcacatctgcgtccatccatggttcagatcctgaagcacttgcaaggacaaacgcatggagaagatctaaactctatatttaggactacgtacgcagaagatacctacagttccatcatggaatcgggtgagtccatcgggccacgatcaagaagagcgccggggagtcagggaaacactagcagcgattacagcagcgatcgaccaagctcttacagacaaagccaaccgaagcctcgctaa
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| Protein seq | MWARFRYSQPAEMARPAAFVPPPPQYVPPEEPSAFARLYDVVDRAKAALVTITGGPTTVHGVVVISSGHGQRARRAVTEIITTAPASDPAPAAPQTGSPSFLNSVAVKVAAGVVGLVLGLYVLALWIRRWRRRRRRQQAQPLPLPPPMLYNPNPYYKGDQPPLPFVFMQQQHHHPTAPQTSGGTFSDAGSERPHSISIDGGSLSYDQLAAATGGFSPDNVIGQGGFGCVYRGRLQDGTEVAIKKLKTESKQGDREFRAEADIITRVHHRNLVSLVGYCISGNDRLLVYEFVPNKTLDTHLHGDKWPPLDWQQRWKIAVGSARGLAYLHDDCSPKIIHRDVKASNILLDHGFEPKVLSLHILFNVSRRSGFPRTSCRFWSSKVATRKPHPCFHKNNGHIWHKYILSLIVFIANPLFCRYIAPEFLSSGKLTDKADVFAFGVVLLELITGRLPVQSSESYMDSTLVGWAKPLISEAMEEGNFDILVDPDIGDDYDENKMMRMMECAAAAVRQSAHLRPSMVQILKHLQGQTHGEDLNSIFRTTYAEDTYSSIMESGESIGPRSRRAPGSQGNTSSDYSSDRPSSYRQSQPKPR |
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| Function | Proline-rich receptor-like protein kinase PERK1 [UniProtKB/Swiss-Prot:Q9LV48] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsPr106_09g0005430 | OsPr106_09g0005430.01 | Chr09 | 9590473 | 9593239 | - | NAM | ||
| CDS seq | atgtgggcgcgtttccggtattcccaaccggccgagatggcacggccggcagcgttcgtacccccaccgcctcagtatgtaccccctgaagagccttcagctttcgcgaggctctatgacgtggtggatcgcgccaaggccgccctggtgaccatcaccggtggaccgacgacggtgcatggtgtcgtcgtcatctcctccggccacgggcagagagcacgccgtgccgtgaccgagatcatcacgacggccccggcgtccgacccggcacccgcggcaccccagacgggctcgccctcgttcttgaattccgtggccgtcaaagtggccgctggggttgtcggtctggttttgggcttgtacgtgctcgcgctctggatccggcgatggaggcggcggcggcggcggcaacaggcccagccgcttccgctaccaccgccaatgttatacaaccccaacccctactacaaaggtgaccagccgccgctgccattcgtcttcatgcagcagcagcaccaccacccgacggcgccgcagaccagcggcggcacgttctccgacgccggctccgagcgcccgcactccatctccatcgacggcggctcgctctcgtacgaccagctggccgccgcgacgggcgggttctcccccgacaacgtcatcgggcagggcggattcgggtgcgtgtacagggggaggctgcaggacggcaccgaggtggcgatcaagaagctcaagacggagagcaagcagggcgaccgcgagttccgcgccgaggcggacatcatcacacgcgtgcaccacaggaacctcgtctccctcgtcggatactgcatctccggcaacgacaggctgctggtttacgagttcgtccccaacaagacgctcgacacgcatttacacggggacaagtggccacctctggattggcagcaaagatggaaaattgctgtgggatctgcaaggggtttggcctatctacacgatgactgttctcctaaaattatacatcgtgatgtcaaggcatccaatattcttctggatcatggttttgagcccaaggttgcagattttggtctagcaaagtacattgctccagagttcctgtctagcgggaagcttactgacaaagccgatgtctttgcttttggtgtcgtcctcttggaactgataactggaaggctgccggttcagtcatctgagtcttacatggacagcacgttagttggttgggcaaaacccttgatttcagaagctatggaggaaggcaactttgatatccttgttgatccggatattggagatgattatgatgaaaacaaaatgatgcgaatgatggagtgtgccgccgctgccgtgcgccaatcagcacatctgcgtccatccatggttcagatcctgaagcacttgcaaggacaaacgcatggagaagatctaaactctatatttaggactacgtacgcagaagatacctacagttccatcatggaatcgggtgagtccatcgggccacgatcaagaagagcgccggggagtcagggaaacactagcagcgattacagcagcgatcgaccaagctcttacagacaaagccaaccgaagcctcgctaa
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| Protein seq | MWARFRYSQPAEMARPAAFVPPPPQYVPPEEPSAFARLYDVVDRAKAALVTITGGPTTVHGVVVISSGHGQRARRAVTEIITTAPASDPAPAAPQTGSPSFLNSVAVKVAAGVVGLVLGLYVLALWIRRWRRRRRRQQAQPLPLPPPMLYNPNPYYKGDQPPLPFVFMQQQHHHPTAPQTSGGTFSDAGSERPHSISIDGGSLSYDQLAAATGGFSPDNVIGQGGFGCVYRGRLQDGTEVAIKKLKTESKQGDREFRAEADIITRVHHRNLVSLVGYCISGNDRLLVYEFVPNKTLDTHLHGDKWPPLDWQQRWKIAVGSARGLAYLHDDCSPKIIHRDVKASNILLDHGFEPKVADFGLAKYIAPEFLSSGKLTDKADVFAFGVVLLELITGRLPVQSSESYMDSTLVGWAKPLISEAMEEGNFDILVDPDIGDDYDENKMMRMMECAAAAVRQSAHLRPSMVQILKHLQGQTHGEDLNSIFRTTYAEDTYSSIMESGESIGPRSRRAPGSQGNTSSDYSSDRPSSYRQSQPKPR
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsPr106_09g0005430 | OsPr106_09g0005430.02 | Chr09 | 9590473 | 9593239 | - | NAM | ||
| CDS seq | atgtgggcgcgtttccggtattcccaaccggccgagatggcacggccggcagcgttcgtacccccaccgcctcagtatgtaccccctgaagagccttcagctttcgcgaggctctatgacgtggtggatcgcgccaaggccgccctggtgaccatcaccggtggaccgacgacggtgcatggtgtcgtcgtcatctcctccggccacgggcagagagcacgccgtgccgtgaccgagatcatcacgacggccccggcgtccgacccggcacccgcggcaccccagacgggctcgccctcgttcttgaattccgtggccgtcaaagtggccgctggggttgtcggtctggttttgggcttgtacgtgctcgcgctctggatccggcgatggaggcggcggcggcggcggcaacaggcccagccgcttccgctaccaccgccaatgttatacaaccccaacccctactacaaaggtgaccagccgccgctgccattcgtcttcatgcagcagcagcaccaccacccgacggcgccgcagaccagcggcggcacgttctccgacgccggctccgagcgcccgcactccatctccatcgacggcggctcgctctcgtacgaccagctggccgccgcgacgggcgggttctcccccgacaacgtcatcgggcagggcggattcgggtgcgtgtacagggggaggctgcaggacggcaccgaggtggcgatcaagaagctcaagacggagagcaagcagggcgaccgcgagttccgcgccgaggcggacatcatcacacgcgtgcaccacaggaacctcgtctccctcgtcggatactgcatctccggcaacgacaggctgctggtttacgagttcgtccccaacaagacgctcgacacgcatttacacggggacaagtggccacctctggattggcagcaaagatggaaaattgctgtgggatctgcaaggggtttggcctatctacacgatgactgttctcctaaaattatacatcgtgatgtcaaggcatccaatattcttctggatcatggttttgagcccaaggtactctctctgcacatattattcaacgtttcaagaagatctggttttcccaggacaagttgcagattttggtctagcaaagtagcaaccaggaaaccacacccatgtttccacaagaataatgggcacatttggcacaagtatatattatccctcattgtattcatagcaaatcctcttttctgcaggtacattgctccagagttcctgtctagcgggaagcttactgacaaagccgatgtctttgcttttggtgtcgtcctcttggaactgataactggaaggctgccggttcagtcatctgagtcttacatggacagcacgttagttggttgggcaaaacccttgatttcagaagctatggaggaaggcaactttgatatccttgttgatccggatattggagatgattatgatgaaaacaaaatgatgcgaatgatggagtgtgccgccgctgccgtgcgccaatcagcacatctgcgtccatccatggttcagatcctgaagcacttgcaaggacaaacgcatggagaagatctaaactctatatttaggactacgtacgcagaagatacctacagttccatcatggaatcgggtgagtccatcgggccacgatcaagaagagcgccggggagtcagggaaacactagcagcgattacagcagcgatcgaccaagctcttacagacaaagccaaccgaagcctcgctaa
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| Protein seq | MWARFRYSQPAEMARPAAFVPPPPQYVPPEEPSAFARLYDVVDRAKAALVTITGGPTTVHGVVVISSGHGQRARRAVTEIITTAPASDPAPAAPQTGSPSFLNSVAVKVAAGVVGLVLGLYVLALWIRRWRRRRRRQQAQPLPLPPPMLYNPNPYYKGDQPPLPFVFMQQQHHHPTAPQTSGGTFSDAGSERPHSISIDGGSLSYDQLAAATGGFSPDNVIGQGGFGCVYRGRLQDGTEVAIKKLKTESKQGDREFRAEADIITRVHHRNLVSLVGYCISGNDRLLVYEFVPNKTLDTHLHGDKWPPLDWQQRWKIAVGSARGLAYLHDDCSPKIIHRDVKASNILLDHGFEPKVLSLHILFNVSRRSGFPRTSCRFWSSKVATRKPHPCFHKNNGHIWHKYILSLIVFIANPLFCRYIAPEFLSSGKLTDKADVFAFGVVLLELITGRLPVQSSESYMDSTLVGWAKPLISEAMEEGNFDILVDPDIGDDYDENKMMRMMECAAAAVRQSAHLRPSMVQILKHLQGQTHGEDLNSIFRTTYAEDTYSSIMESGESIGPRSRRAPGSQGNTSSDYSSDRPSSYRQSQPKPR
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| A5 | Chr09 | 9591652 | 9591809 | - | OsPr106_09g0005430.02 | OsPr106_09g0005430.01,OsPr106_09g0005430.02 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_09g0314800 | RBH | 0.0 | 0.0 | 0.228829 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os09g14580 | RBH | 0.0 | 0.0 | 0.060303 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os09g0314800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0024630 | SBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0024430 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_09g0016630 | SBH | 0.480213 | 30.749866 | 15.681616 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_09g0005220 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0013520 | RBH | 0.000000 | 0.000000 | 4.472725 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_09G0153100 | RBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_09g0005590 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_09G0168600 | SBH | 0 | 0 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0024300 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_09g0016180 | SBH | 0.620801 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_09g0016280 | SBH | 0.000000 | 5.935748 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0024180 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_09g0016260 | SBH | 0.406488 | 19.943939 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_09G016470 | SBH | 0.187914 | 1.138397 | 2.094473 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_09g0005360 | SBH | 0.0 | 0.0 | 0.0 |
