Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_09G0153100 | OGI:09026240 | 5/16 | Minghui 63 | MH63RS3 | HZAU | Chr09:9765618-9768225 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | TTAGCGAGGCTTCGGTTGGCTTTGTCTGTAAGAGCTTGGTCGATCGCTGCTGTAATCGCTGCTAGTGTTTCCCTGACTCCCCGGCGCTCTTCTTGATCGTGGCCCGATGGACTCACCCGATTCCATGATGGAACTGTAGGTATCTTCTGCGTACGTAGTCCTAAATATAGAGTTTAGATCTTCTCCATGCGTTTGTCCTTGCAAGTGCTTCAGGATCTGAAAGGAGAAAAGGAACTTCTTGTCACATATAGGAGTATCAAATATCAGTTATTTGGTTATGTAGTTATTGTTCTATTTTATTCTGGAACAAGGCACTACCACTACTTGTACAGTTGTACTGAAGGTTTAGCAGTTTCGGTGTTTCAAACTCAAAACTTTTCAGGGAAGGAAACGAACCTGAACCATGGATGGACGCAGATGTGCTGATTGGCGCACGGCAGCGGCGGCACACTCCATCATTCGCATCATTTTGTTTTCATCATAATCATCTCCAATATCCGGATCAACAAGGATATCAAAGTTGCCTTCCTCCATAGCTTCTGAAATCAAGGGTTTTGCCTGAAGAAGCAAATTCAGAAATGTTCTATCAGGCTAGACATCAAAGTTCCTCTTAGAACTACATTTATTGGAGTGAAGGAAATGTATTAGATGTCAAGGAATGAATTTTGTCAAGATTCAAGAACTTCTTTTTGTTAGAAACTGACCCAACCAACTAACGTGCTGTCCATGTAAGACTCAGATGACTGAACCGGCAGCCTTCCAGTTATCAGTTCCAAGAGGACGACACCAAAAGCAAAGACATCGGCTTTGTCAGTAAGCTTCCCGCTAGACAGGAACTCTGGAGCAATGTACCTGCAGAAAAGAGGATTTGCTATGAATACAATGAGGGATAATATATACTTGTGCTATAGATATTCATGTTCAGAAATTAGAATGAACAAACTCGGAATACATAGGGAATGCTGAAGAGAAGTACTGACCCAAATGTGCCCATTATTCTTGTGGAAACATGGGTGTGGTTTCCTGGTTGCTACTTTGCTAGACCAAAATCTGCAACCTGCAAAGGATCAAGACATACTGAGTATAGGACTGTGCAATATAATGGCATATTGTTTGCAATTCAAACTTGTCCTGGGATTGCTTCAAAAAAAAAACTTGTCCTGGGAAAACCAGATCTTCTTGAAACGTTGAATAATATGTGCAGAGAGAGTACCTTGGGCTCAAAACCATGATCCAGAAGAATATTGGATGCCTTGACATCACGATGTATAATTTTAGGAGAACCTGAATAGTATAAACGGACTTTTTCGTATTAAATCACAGTTCAACACTAGATACGAAACTGAATATAAGTGTATAACGCGAAATGGATGGGTGGAGTAGAACTAACAGTCATCGTGTAGATAGGCCAAACCCCTTGCAGATCCCACAGCAATTTTCCATCTTTGCTGCCAATCCAGAGGTGGCCACTTGTCCCCTGAATTAAGTTCAACAGTAACATGATCAGATCAGAGTAAAAAACCAAGACTAAAAAAACATTGACTAAACAGTCAACGGATGCATTTGACAGAAGAAAAAACAAATATGTAAACCATTATTTTTTTTATTCATTTTAGATGTAGACATAGGTTTTATACCGTGTAAATGCGTGTCGAGCGTCTTGTTGGGGACGAACTCGTAAACCAGCAGCCTGTCGTTGCCGGAGATGCAGTATCCGACGAGGGAGACGAGGTTCCTGTGGTGCACGCGTGTGATGATGTCCGCCTCGGCGCGGAACTCGCGGTCGCCCTGCTTGCTCTCCGTCTTGAGCTTCTTGATCGCCACCTCGGTGCCGTCCTGCAGCCTCCCCCTGTACACGCACCCGAATCCGCCCTGCCCGATGACGTTGTCGGGGGAGAACCCGCCCGTCGCGGCGGCCAGCTGGTCGTACGAGAGCGAGCCGCCGTCGATGGAGATGGAGTGCGGGCGCTCGGAGCCGGCGTCGGAGAACGTGCCGCCGCTGGTCTGCGGCGCCGTCGGGTGGTGGTGCTGCTGCTGCATGAAGACGAATGGCAGCGGCGGCTGGTCACCTGCAAGCACCAAAGTGTGGTGGATATCTCCGACGACGACGACGACATGGACGTACGTACGTACACGACGTCGAACGTGACAAGAATCACAAGATGCGCGCACCTTTGTAGTAGGGGTTGGGGTTGTATAACATTGGCGGTGGTAGCGGAAGCGGCTGGGCCTGTTGCCGCCGCCGCCGCCGCCTCCATCGCCGGATCCAGAGCGCGAGCACGTACAAGCCCAAAACCAGACCGACAACCCCAGCGGCCACTTTGACGGCCACGGAATTCAAGAACGAGGGCGAGCCCGTCTGGGGTGCCGCGGGTGCCGGGTCGGACGCCGGGGCCGTCGTGATGATCTCGGTCACGGCACGGCGTGCTCTCTGCCCGTGGCCGGAGGAGATGACGACGACACCATGCACCGTCGTCGGTCCACCGGTGATGGTCACCAGGGCGGCCTTGGCGCGATCCACCACGTCATAGAGCCTCGCGAAAGCTGAAGGCTCTTCAGGGGGTACATACTGAGGCGGTGGGGGTACGAACGCTGCCGGCCGTGCCAT
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| CDS seq | ATGGCACGGCCGGCAGCGTTCGTACCCCCACCGCCTCAGTATGTACCCCCTGAAGAGCCTTCAGCTTTCGCGAGGCTCTATGACGTGGTGGATCGCGCCAAGGCCGCCCTGGTGACCATCACCGGTGGACCGACGACGGTGCATGGTGTCGTCGTCATCTCCTCCGGCCACGGGCAGAGAGCACGCCGTGCCGTGACCGAGATCATCACGACGGCCCCGGCGTCCGACCCGGCACCCGCGGCACCCCAGACGGGCTCGCCCTCGTTCTTGAATTCCGTGGCCGTCAAAGTGGCCGCTGGGGTTGTCGGTCTGGTTTTGGGCTTGTACGTGCTCGCGCTCTGGATCCGGCGATGGAGGCGGCGGCGGCGGCGGCAACAGGCCCAGCCGCTTCCGCTACCACCGCCAATGTTATACAACCCCAACCCCTACTACAAAGGTGACCAGCCGCCGCTGCCATTCGTCTTCATGCAGCAGCAGCACCACCACCCGACGGCGCCGCAGACCAGCGGCGGCACGTTCTCCGACGCCGGCTCCGAGCGCCCGCACTCCATCTCCATCGACGGCGGCTCGCTCTCGTACGACCAGCTGGCCGCCGCGACGGGCGGGTTCTCCCCCGACAACGTCATCGGGCAGGGCGGATTCGGGTGCGTGTACAGGGGGAGGCTGCAGGACGGCACCGAGGTGGCGATCAAGAAGCTCAAGACGGAGAGCAAGCAGGGCGACCGCGAGTTCCGCGCCGAGGCGGACATCATCACACGCGTGCACCACAGGAACCTCGTCTCCCTCGTCGGATACTGCATCTCCGGCAACGACAGGCTGCTGGTTTACGAGTTCGTCCCCAACAAGACGCTCGACACGCATTTACACGGGGACAAGTGGCCACCTCTGGATTGGCAGCAAAGATGGAAAATTGCTGTGGGATCTGCAAGGGGTTTGGCCTATCTACACGATGACTGTTCTCCTAAAATTATACATCGTGATGTCAAGGCATCCAATATTCTTCTGGATCATGGTTTTGAGCCCAAGGTTGCAGATTTTGGTCTAGCAAAAATAATGGGCACATTTGGGTCATTCCTGTCTAGCGGGAAGCTTACTGACAAAGCCGATGTCTTTGCTTTTGGTGTCGTCCTCTTGGAACTGATAACTGGAAGGCTGCCGGTTCAGTCATCTGAGTCTTACATGGACAGCACGTTAGTTGGTTGGGCAAAACCCTTGATTTCAGAAGCTATGGAGGAAGGCAACTTTGATATCCTTGTTGATCCGGATATTGGAGATGATTATGATGAAAACAAAATGATGCGAATGATGGAGTGTGCCGCCGCTGCCGTGCGCCAATCAGCACATCTGCGTCCATCCATGGTTCAGATCCTGAAGCACTTGCAAGGACAAACGCATGGAGAAGATCTAAACTCTATATTTAGGACTACGTACGCAGAAGATACCTACAGTTCCATCATGGAATCGGGTGAGTCCATCGGGCCACGATCAAGAAGAGCGCCGGGGAGTCAGGGAAACACTAGCAGCGATTACAGCAGCGATCGACCAAGCTCTTACAGACAAAGCCAACCGAAGCCTCGCTAA
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| Protein seq | MARPAAFVPPPPQYVPPEEPSAFARLYDVVDRAKAALVTITGGPTTVHGVVVISSGHGQRARRAVTEIITTAPASDPAPAAPQTGSPSFLNSVAVKVAAGVVGLVLGLYVLALWIRRWRRRRRRQQAQPLPLPPPMLYNPNPYYKGDQPPLPFVFMQQQHHHPTAPQTSGGTFSDAGSERPHSISIDGGSLSYDQLAAATGGFSPDNVIGQGGFGCVYRGRLQDGTEVAIKKLKTESKQGDREFRAEADIITRVHHRNLVSLVGYCISGNDRLLVYEFVPNKTLDTHLHGDKWPPLDWQQRWKIAVGSARGLAYLHDDCSPKIIHRDVKASNILLDHGFEPKVADFGLAKIMGTFGSFLSSGKLTDKADVFAFGVVLLELITGRLPVQSSESYMDSTLVGWAKPLISEAMEEGNFDILVDPDIGDDYDENKMMRMMECAAAAVRQSAHLRPSMVQILKHLQGQTHGEDLNSIFRTTYAEDTYSSIMESGESIGPRSRRAPGSQGNTSSDYSSDRPSSYRQSQPKPR |
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| Function | Proline-rich receptor-like protein kinase PERK13 [UniProtKB/Swiss-Prot:Q9CAL8] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_09G0153100 | OsMH63_09T0153100.1 | Chr09 | 9765618 | 9768225 | - | maker | ||
| CDS seq | ATGGCACGGCCGGCAGCGTTCGTACCCCCACCGCCTCAGTATGTACCCCCTGAAGAGCCTTCAGCTTTCGCGAGGCTCTATGACGTGGTGGATCGCGCCAAGGCCGCCCTGGTGACCATCACCGGTGGACCGACGACGGTGCATGGTGTCGTCGTCATCTCCTCCGGCCACGGGCAGAGAGCACGCCGTGCCGTGACCGAGATCATCACGACGGCCCCGGCGTCCGACCCGGCACCCGCGGCACCCCAGACGGGCTCGCCCTCGTTCTTGAATTCCGTGGCCGTCAAAGTGGCCGCTGGGGTTGTCGGTCTGGTTTTGGGCTTGTACGTGCTCGCGCTCTGGATCCGGCGATGGAGGCGGCGGCGGCGGCGGCAACAGGCCCAGCCGCTTCCGCTACCACCGCCAATGTTATACAACCCCAACCCCTACTACAAAGGTGACCAGCCGCCGCTGCCATTCGTCTTCATGCAGCAGCAGCACCACCACCCGACGGCGCCGCAGACCAGCGGCGGCACGTTCTCCGACGCCGGCTCCGAGCGCCCGCACTCCATCTCCATCGACGGCGGCTCGCTCTCGTACGACCAGCTGGCCGCCGCGACGGGCGGGTTCTCCCCCGACAACGTCATCGGGCAGGGCGGATTCGGGTGCGTGTACAGGGGGAGGCTGCAGGACGGCACCGAGGTGGCGATCAAGAAGCTCAAGACGGAGAGCAAGCAGGGCGACCGCGAGTTCCGCGCCGAGGCGGACATCATCACACGCGTGCACCACAGGAACCTCGTCTCCCTCGTCGGATACTGCATCTCCGGCAACGACAGGCTGCTGGTTTACGAGTTCGTCCCCAACAAGACGCTCGACACGCATTTACACGGGGACAAGTGGCCACCTCTGGATTGGCAGCAAAGATGGAAAATTGCTGTGGGATCTGCAAGGGGTTTGGCCTATCTACACGATGACTGTTCTCCTAAAATTATACATCGTGATGTCAAGGCATCCAATATTCTTCTGGATCATGGTTTTGAGCCCAAGGTTGCAGATTTTGGTCTAGCAAAAATAATGGGCACATTTGGGTCATTCCTGTCTAGCGGGAAGCTTACTGACAAAGCCGATGTCTTTGCTTTTGGTGTCGTCCTCTTGGAACTGATAACTGGAAGGCTGCCGGTTCAGTCATCTGAGTCTTACATGGACAGCACGTTAGTTGGTTGGGCAAAACCCTTGATTTCAGAAGCTATGGAGGAAGGCAACTTTGATATCCTTGTTGATCCGGATATTGGAGATGATTATGATGAAAACAAAATGATGCGAATGATGGAGTGTGCCGCCGCTGCCGTGCGCCAATCAGCACATCTGCGTCCATCCATGGTTCAGATCCTGAAGCACTTGCAAGGACAAACGCATGGAGAAGATCTAAACTCTATATTTAGGACTACGTACGCAGAAGATACCTACAGTTCCATCATGGAATCGGGTGAGTCCATCGGGCCACGATCAAGAAGAGCGCCGGGGAGTCAGGGAAACACTAGCAGCGATTACAGCAGCGATCGACCAAGCTCTTACAGACAAAGCCAACCGAAGCCTCGCTAA
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| Protein seq | MARPAAFVPPPPQYVPPEEPSAFARLYDVVDRAKAALVTITGGPTTVHGVVVISSGHGQRARRAVTEIITTAPASDPAPAAPQTGSPSFLNSVAVKVAAGVVGLVLGLYVLALWIRRWRRRRRRQQAQPLPLPPPMLYNPNPYYKGDQPPLPFVFMQQQHHHPTAPQTSGGTFSDAGSERPHSISIDGGSLSYDQLAAATGGFSPDNVIGQGGFGCVYRGRLQDGTEVAIKKLKTESKQGDREFRAEADIITRVHHRNLVSLVGYCISGNDRLLVYEFVPNKTLDTHLHGDKWPPLDWQQRWKIAVGSARGLAYLHDDCSPKIIHRDVKASNILLDHGFEPKVADFGLAKIMGTFGSFLSSGKLTDKADVFAFGVVLLELITGRLPVQSSESYMDSTLVGWAKPLISEAMEEGNFDILVDPDIGDDYDENKMMRMMECAAAAVRQSAHLRPSMVQILKHLQGQTHGEDLNSIFRTTYAEDTYSSIMESGESIGPRSRRAPGSQGNTSSDYSSDRPSSYRQSQPKPR
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0 | 0 | 0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_09g0314800 | RBH | 0.0 | 0.0 | 0.228829 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os09g14580 | RBH | 0.0 | 0.0 | 0.060303 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os09g0314800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_09g0008210 | SBH | 0.0 | 21.368435 | 2.673128 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_09g0008190 | SBH | 0.000000 | 4.195437 | 0.149855 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_09g0005880 | SBH | 0.0 | 0.0 | 0.758418 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_09g0005220 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_09g0005430 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_03G0370700 | SBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_09g0005590 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0373400 | SBH | 0.0220525 | 0.01408 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0024300 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0024340 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0024410 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0024180 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0024080 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G024140 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_09g0005360 | SBH | 0.0 | 0.0 | 0.0 |
