Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_07g0537400 | OGI:07058990 | 16/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr07:21131097-21132528 | ||||||||
| Gene Symbol | RLCK239, OsRLCK239 | ||||||||||
| DNA seq | GTGCCAATGCAATCATATATATCATTCACTTTATATAGTGCATAACTATGTACAGCTTCAATAAGCGAGTGCTTGCACTTATGCAGGGCGTCCTTCCTAGTGGTGAAGAGATAGCTGTAAAGAGGCTCTCTATGAGTTCAGGACAAGGAATAGAAGAGCTAAAAAATGAGCTTGTTTTGGTTGCTAAACTTCAGCAGAAGAATCTTGTTAGGCTTGTTGGTGTCTGCTTGCAAGAACATGAGAAATTGCTTGTGTATGAATACATGCCCAATAGAAGTATCGACACCATTCTATTTGGTACTATTCTCAGAATTCAACAATTGCACAAGCACTACTAGATCTGAACTGTACATTTCCTTTCCAAAATGTGTTTCTTTACACCCCCCCCCCCCAACCTTCTTGAATCAGGTCTTCAACCCAAGCCAAACACTTGGAATTCACATGCCCTTGTCATCATGAATATATATTAGTGGTAAAACTGTAGTTTACTAAGACATTTCTTGTTCAATTGACAGATCTTGAGAAAAGGAAGGAGTTAGACTGGGGAAAAAGATTTAGGATAATAAATGGAATTGCTCGCGCATTACAGTATCTTCATGAAGATTCTCAACTGAGAATAATTCACCGAGACCTCAAAGCAAGCAATGTTTTATTAGACTCCGATTATAACCCTAAGATTTCAGACTTTGGCTTGGCAAGACTATTTGAGGGTGATCAAACAAGGGAAGTCACAAGCCGTGTGGTAGGAACATAGTAAGTATTGTCTAAACTAACCCAATCAGATACAAATAGTATGCTGGCATGAGTAACTTTATTCTCTTACTGCAGTGGATATATGGCACCAGAGTACGCGATGCGTGGCCACTATTCTGTAAAATCAGACGTCTTTAGCTTTGGCATATTGATGATAGAAATTGTGACAGGAAGAAGAAGCAGTGGTTCATATAGCTTTGATCAATCATATGATCTCCTAAGCCGTGTAAGTCCTTTTTCCTGGACTATTCTACAAAGCTAATCAGAATGATCTCCTAACTTGTTACAAAAATTCTGAATCATCTTTGCCAATATGATGCAGGTATGGGAGCACTGGACCATGGGAACAATTTTGGAGATGATGGATCCCTCTCTTACAAGCCATGCTCCTCGAGACCAGATGCTCAAGTGTATTCACATTGGGCTACTGTGTGTTCAAGATAACCCAGCAGATCGACCTATGATGTCAACAGTGAATATCATGCTTAGCAGCAACACAGTGTCTCTTCAATCCCCATCCAAGCCATCATTTTTCATTCCCAAGAGTGGTACAGACTCAAATATATACTCGGAATCATACCCACAAACTTCCCAACCGACCCATAGGTCTGGGATGATGTCAGTTAATGATGTGTCTGTTACAGAGCTTGAACCAAGATAAATAAATCAATTTTCTGAA
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| CDS seq | ATGTACAGCTTCAATAAGCGAGTGCTTGCACTTATGCAGGGCGTCCTTCCTAGTGGTGAAGAGATAGCTGTAAAGAGGCTCTCTATGAGTTCAGGACAAGGAATAGAAGAGCTAAAAAATGAGCTTGTTTTGGTTGCTAAACTTCAGCAGAAGAATCTTGTTAGGCTTGTTGGTGTCTGCTTGCAAGAACATGAGAAATTGCTTGTGTATGAATACATGCCCAATAGAAGTATCGACACCATTCTATTTGGTACTATTCTCAGAATTCAACAATTGCACAAGCACTACTAG |
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| Protein seq | MYSFNKRVLALMQGVLPSGEEIAVKRLSMSSGQGIEELKNELVLVAKLQQKNLVRLVGVCLQEHEKLLVYEYMPNRSIDTILFGTILRIQQLHKHY |
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| Function | Cysteine-rich receptor-like protein kinase 10 [UniProtKB/Swiss-Prot:Q0D5R2] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_07g0537400 | OsNip_07t0537400-01 | Chr07 | 21131097 | 21132528 | + | RAP2018-11-26 | ||
| CDS seq | ATGTACAGCTTCAATAAGCGAGTGCTTGCACTTATGCAGGGCGTCCTTCCTAGTGGTGAAGAGATAGCTGTAAAGAGGCTCTCTATGAGTTCAGGACAAGGAATAGAAGAGCTAAAAAATGAGCTTGTTTTGGTTGCTAAACTTCAGCAGAAGAATCTTGTTAGGCTTGTTGGTGTCTGCTTGCAAGAACATGAGAAATTGCTTGTGTATGAATACATGCCCAATAGAAGTATCGACACCATTCTATTTGGTACTATTCTCAGAATTCAACAATTGCACAAGCACTACTAG
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| Protein seq | MYSFNKRVLALMQGVLPSGEEIAVKRLSMSSGQGIEELKNELVLVAKLQQKNLVRLVGVCLQEHEKLLVYEYMPNRSIDTILFGTILRIQQLHKHY |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.000000 | 0.0 | 0.473961 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0538400 | SBH | 1.055166 | 0.958122 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g35260 | SBH | 1.072291 | 1.263995 | 0.368483 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0537400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0024210 | SBH | 2.625039 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0024260 | SBH | 1.981334 | 0.0 | 0.572380 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0017840 | SBH | 2.699874 | 0.0 | 2.725205 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0017760 | SBH | 0.380633 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0017880 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0344900 | SBH | 0.1110465 | 3.7430005 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0018370 | RBH | 0.0 | 0.0 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0369600 | SBH | 11.7263315 | 38.9149895 | 22.671424 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0023950 | SBH | 5.610744 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0017780 | RBH | 0.0 | 0.000000 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0017760 | RBH | 0.0 | 10.376482 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0018000 | RBH | 0.0 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0017830 | SBH | 0.000000 | 2.189205 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G017990 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0017750 | SBH | 0.0 | 6.403131 | 0.0 |
