Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_07g0538400 | OGI:07058990 | 16/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr07:21167242-21170678 | ||||||||
| Gene Symbol | RLCK235, OsRLCK235 | ||||||||||
| DNA seq | GTTCCACCGTGCAGTCACGATGGCGGCTAGCCGTGTCGCCCTGTCCGTGCCAGTCGCCGCCGCCGTCGCGCTGCTGCTGCTCGCGCTCCCCCGCGCCGCGGTGTCGTACCCGTGGGGGTTGTGCAACGACACGGCCGGCGAATTCCCGGCGAGGAGGAGCAGCTACCTTGCCAGTATCAACCTCATCGCCGCCACCCTCCCCGGCAACGCCTCGGCCTCGCCGGACCTGTTCGCCACCGCCGAGGGCGTCGGCGCGCCGCCGGACCAGGTCTCCGCCCTCGCGCTCTGCCGCGGCGACGCCAACGCCTCCACCTGCCTCGCCTGCCTCACCCAGGCCTTCCTCGACCTCCCCAACGCCTGCGCCTACCACAAGGTCGCCGCCATCTTCTACGACTCCTGCCTGCTCGCCTACTCCAACGCCACCATCGCCGCCGGCGACTTCTCCTCCGAGAAGATCCCGATTTACGGGTTCTACAGCAACGCGAACGCCACGACGGAGCAGGCACGGTTCAACCGCCTCGTGGCAGCGCTGGTGAACGCCACCGCCGACTACGCGGCGCGCAACTCCACGCGGCGGCGGTACGCGTCCGGGGAGGCCGACTTCAACGCGGAGTTCCCCAAGGTGTACAGCTGGGCGCAGTGCACTCCGGACCTGACGCCGGCGAGCTGCCGGAGTTGCCTCGCGCAGATCATAGGGACATATATTGGGTTTTTTGAGAACAGGGTCGGAGGATTCGTCCGCGCGGTCTGGTGCAGCTTCCAGTACAGTACCACGCCCTTTCTCGACGGACCGATGCTTGTAAGGTTACAAGGAACGTCAGGTGCCTCGCCGGCGCCGTCGCCGGCGGCCGTGGTGCCCGCAGTTAACCAGACGCCGCCGGCGGCGACGCCGACGCTTGAAGGAGGTGAGTCAAAGCGCCTTGGCCTTAAATGGTACTTACTCCATTTTATATTACAAGTTGCTTTCACTTTTTTTCTAGAAAAACTTAGTAATGTCTACAACTCTAAATTAGTTTGATTAAATCTAACATGAATATATTTTGATGATATGTTTGTTTTGTGTTAAAAATATTATTATTTTTTCCGTATAAACTTAATCAAACTTTAAAAATTTCAATAGAAAAAATCAAAATAACTTATAAAATTAAACGGAGAGAGTAGATTATAATTGAGTTACTTTTCTTGAAAAATTTAGATTAAGGCCCTGTTTGTTTCAGTTTAAGATTATTGTAATCTAAATTATTGAGTCAGATATTATAAGCTGGATTATAATAAGCAGACATAGAATAAGTTGATAGCTGTTTATTTCTCTGGATTATTAGCTGGTTGTTAGGTGGTAGCCATCTAATAATCTAAAAAAAGCACCTTTAAAGTAGATTACTAGATTATAGATTGTAATAATCTATCATAATAAGTTATCTGTTTAATAATTCAAATTATAATAATCTTAAGCTGAAACAAACATTGCCTAAATATAATTTTGTGACACTACTTAGCCTGACATTTTACTTCTAAAAAAAAATAATCCAGGGAGGAAGTACAGCGTCCCTGGATTGGTTCTTATAATTCTGCTGCCTACAATAGCAGCAATAAACGTTGTGGTTGGCCTCTGTTTCTGGAGGAGGAGGAGGCGACCAGTAACAGAAGCAAAGCGAACATGTATGTTCTGCAAAATTCTCCAGTTTACTATACACTTCAAGCGACCTTAGATGAACAATAGCTTATCCATTTTTTTTTTTGTCTTTGGTAGATGCCAATTACTCCACTGAAGCAGAGGACATTGAGAATTTAGATTCGATGCTCATCGACATCTCCATTTTGCGATCTGCAACTGGTGATTTTGCAGAGAGTAACAAGCTCGGTGAGGGCGGATTTGGTGCTGTGTACAAGGTATGAAAAAAAATGCATATATGTCAGTGAATCACTATCAAATTCTCTCATTATTAAGCTTACTGTTTTGTTTCATGTTCATAGGGTGTGCTCCCGGACGGCTACGAGATAGCAGTGAAGAGACTGTCGAAGAGCTCAACGCAAGGGGTGGAAGAACTGAAGAACGAGCTGGCTCTGGTTGCGAAGCTGAAGCACAAGAACCTTGTCAGCCTCGTCGGCGTCTGCTTGGAGCAACAGGAGCGGCTGCTCGTATACGAGTTTGTTCCAAACCGGAGCCTCGACCTGATCCTTTTCGGTACAAACTAAGCCATGTTTAACCTCAGTTTTCCTCTGTTTCTTATGCAAAGATTGGTACCATCCATTAACCTGATCTTTTCTGTGTGATCAATGTCAGATACTGAGAAAAGTGAGCAGCTGGACTGGGAGAAGAGGTACAAGATCATAAACGGGATCGCTAGAGGTCTGCAATACCTCCACGAAGATTCTCAGCTCAAGGTAGTCCACCGCGATCTCAAGGCGAGCAACATCTTGCTAGACGTGAATATGAACCCCAAGATTTCAGACTTTGGCCTCGCGAGAATTTTCGGTCGAGATCAGACCCAGGCTGTCACCAAGAATGTCATCGGCACATAGTAAGTCTATCTAAACTAGCACATATAATATAATTCATATTTCTAGCTATCATCTAGTAGCAATTTGCTGACTGTAAAATTACCGTGCTGTTCCAGTGGATACATGGCTCCTGAGTACCTGACACGTGGGAACTACTCTGTCAAGTCAGACGTATTCAGCTTCGGCGTCATGGTCCTTGAAATCGTGACAGGTAGGAAGAACAACCACAGCTACAACTCCCAACAATCTGAAGATCTCTTGACCATGGTGAGTTATCTGAATATCTTATCACCATCATCCTTGATCCTTCTCGAGAGAAGCACATCGAGTTGCATTTTGACTCATGGGTTTTACTGCAAAAATGGTGCAGATCTGGGAGCAATGGGTGGCCGGGACGGTGCTGGAGATGGTCGATCCGAGCATGAACAGCTTCTTCTCGGAGAGCGACGTGATGAGATGCATCCACATTGGGCTCCTCTGCGTGCAGGGTGACCCGGCGAACCGGCCGGTGATGTCGTCGGTGGTGCTGATGCTCGGCACGGACACCGTCGAACTCCATGCCCCCGCGAAGCCGACGCTCTTCGCCAGGAAAGGCGGCGGCGACGAATCCGGCGTCGCGTCCGGCGGCATGTCAATCGTGTCATTGGAGGAGCAGTCGTAGAGACGGTAGTCCAGTGTTGCTTATTATCAGAGCGGTAGAGCCAGAGGCCTGAAGAGGCCAGTGCAGAATCCTACGAGAGAAGATTGTGCTACACTGTGCTACCGTACCCATGTGTAGCGGCAATTTAGAAATGGCTGCCAGATCTTCATCGGAGTGATCATGAAAAGATCAAGCGATAATGAAATTGTGTCAAATTACGATCAATATGAGAGTAAACTTTAGATCTTTTTCAACTGATGGCGAAATGATAAACGAAATTGTGTCTTTTCGCTTT
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| CDS seq | GCCAATTACTCCACTGAAGCAGAGGACATTGAGAATTTAGATTCGATGCTCATCGACATCTCCATTTTGCGATCTGCAACTGGTGATTTTGCAGAGAGTAACAAGCTCGGTGAGGGCGGATTTGGTGCTGTGTACAAGGGTGTGCTCCCGGACGGCTACGAGATAGCAGTGAAGAGACTGTCGAAGAGCTCAACGCAAGGGGTGGAAGAACTGAAGAACGAGCTGGCTCTGGTTGCGAAGCTGAAGCACAAGAACCTTGTCAGCCTCGTCGGCGTCTGCTTGGAGCAACAGGAGCGGCTGCTCGTATACGAGTTTGTTCCAAACCGGAGCCTCGACCTGATCCTTTTCGATACTGAGAAAAGTGAGCAGCTGGACTGGGAGAAGAGGTACAAGATCATAAACGGGATCGCTAGAGGTCTGCAATACCTCCACGAAGATTCTCAGCTCAAGGTAGTCCACCGCGATCTCAAGGCGAGCAACATCTTGCTAGACGTGAATATGAACCCCAAGATTTCAGACTTTGGCCTCGCGAGAATTTTCGGTCGAGATCAGACCCAGGCTGTCACCAAGAATGTCATCGGCACATATGGATACATGGCTCCTGAGTACCTGACACGTGGGAACTACTCTGTCAAGTCAGACGTATTCAGCTTCGGCGTCATGGTCCTTGAAATCGTGACAGGTAGGAAGAACAACCACAGCTACAACTCCCAACAATCTGAAGATCTCTTGACCATGATCTGGGAGCAATGGGTGGCCGGGACGGTGCTGGAGATGGTCGATCCGAGCATGAACAGCTTCTTCTCGGAGAGCGACGTGATGAGATGCATCCACATTGGGCTCCTCTGCGTGCAGGGTGACCCGGCGAACCGGCCGGTGATGTCGTCGGTGGTGCTGATGCTCGGCACGGACACCGTCGAACTCCATGCCCCCGCGAAGCCGACGCTCTTCGCCAGGAAAGGCGGCGGCGACGAATCCGGCGTCGCGTCCGGCGGCATGTCAATCGTGTCATTGGAGGAGCAGTCGTAG
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| Protein seq | ANYSTEAEDIENLDSMLIDISILRSATGDFAESNKLGEGGFGAVYKGVLPDGYEIAVKRLSKSSTQGVEELKNELALVAKLKHKNLVSLVGVCLEQQERLLVYEFVPNRSLDLILFDTEKSEQLDWEKRYKIINGIARGLQYLHEDSQLKVVHRDLKASNILLDVNMNPKISDFGLARIFGRDQTQAVTKNVIGTYGYMAPEYLTRGNYSVKSDVFSFGVMVLEIVTGRKNNHSYNSQQSEDLLTMIWEQWVAGTVLEMVDPSMNSFFSESDVMRCIHIGLLCVQGDPANRPVMSSVVLMLGTDTVELHAPAKPTLFARKGGGDESGVASGGMSIVSLEEQS |
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| Function | Cysteine-rich receptor-like protein kinase 6 [UniProtKB/Swiss-Prot:Q0D5R3] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_07g0538400 | OsNip_07t0538400-01 | Chr07 | 21168993 | 21170678 | + | RAP2018-11-26 | ||
| CDS seq | GCCAATTACTCCACTGAAGCAGAGGACATTGAGAATTTAGATTCGATGCTCATCGACATCTCCATTTTGCGATCTGCAACTGGTGATTTTGCAGAGAGTAACAAGCTCGGTGAGGGCGGATTTGGTGCTGTGTACAAGGGTGTGCTCCCGGACGGCTACGAGATAGCAGTGAAGAGACTGTCGAAGAGCTCAACGCAAGGGGTGGAAGAACTGAAGAACGAGCTGGCTCTGGTTGCGAAGCTGAAGCACAAGAACCTTGTCAGCCTCGTCGGCGTCTGCTTGGAGCAACAGGAGCGGCTGCTCGTATACGAGTTTGTTCCAAACCGGAGCCTCGACCTGATCCTTTTCGATACTGAGAAAAGTGAGCAGCTGGACTGGGAGAAGAGGTACAAGATCATAAACGGGATCGCTAGAGGTCTGCAATACCTCCACGAAGATTCTCAGCTCAAGGTAGTCCACCGCGATCTCAAGGCGAGCAACATCTTGCTAGACGTGAATATGAACCCCAAGATTTCAGACTTTGGCCTCGCGAGAATTTTCGGTCGAGATCAGACCCAGGCTGTCACCAAGAATGTCATCGGCACATATGGATACATGGCTCCTGAGTACCTGACACGTGGGAACTACTCTGTCAAGTCAGACGTATTCAGCTTCGGCGTCATGGTCCTTGAAATCGTGACAGGTAGGAAGAACAACCACAGCTACAACTCCCAACAATCTGAAGATCTCTTGACCATGATCTGGGAGCAATGGGTGGCCGGGACGGTGCTGGAGATGGTCGATCCGAGCATGAACAGCTTCTTCTCGGAGAGCGACGTGATGAGATGCATCCACATTGGGCTCCTCTGCGTGCAGGGTGACCCGGCGAACCGGCCGGTGATGTCGTCGGTGGTGCTGATGCTCGGCACGGACACCGTCGAACTCCATGCCCCCGCGAAGCCGACGCTCTTCGCCAGGAAAGGCGGCGGCGACGAATCCGGCGTCGCGTCCGGCGGCATGTCAATCGTGTCATTGGAGGAGCAGTCGTAG
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| Protein seq | ANYSTEAEDIENLDSMLIDISILRSATGDFAESNKLGEGGFGAVYKGVLPDGYEIAVKRLSKSSTQGVEELKNELALVAKLKHKNLVSLVGVCLEQQERLLVYEFVPNRSLDLILFDTEKSEQLDWEKRYKIINGIARGLQYLHEDSQLKVVHRDLKASNILLDVNMNPKISDFGLARIFGRDQTQAVTKNVIGTYGYMAPEYLTRGNYSVKSDVFSFGVMVLEIVTGRKNNHSYNSQQSEDLLTMIWEQWVAGTVLEMVDPSMNSFFSESDVMRCIHIGLLCVQGDPANRPVMSSVVLMLGTDTVELHAPAKPTLFARKGGGDESGVASGGMSIVSLEEQS
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_07g0538400 | OsNip_07t0538400-02 | Chr07 | 21167242 | 21170635 | + | IsoSeq | ||
| CDS seq | TCCACCGTGCAGTCACGATGGCGGCTAGCCGTGTCGCCCTGTCCGTGCCAGTCGCCGCCGCCGTCGCGCTGCTGCTGCTCGCGCTCCCCCGCGCCGCGGTGTCGTACCCGTGGGGGTTGTGCAACGACACGGCCGGCGAATTCCCGGCGAGGAGGAGCAGCTACCTTGCCAGTATCAACCTCATCGCCGCCACCCTCCCCGGCAACGCCTCGGCCTCGCCGGACCTGTTCGCCACCGCCGAGGGCGTCGGCGCGCCGCCGGACCAGGTCTCCGCCCTCGCGCTCTGCCGCGGCGACGCCAACGCCTCCACCTGCCTCGCCTGCCTCACCCAGGCCTTCCTCGACCTCCCCAACGCCTGCGCCTACCACAAGGTCGCCGCCATCTTCTACGACTCCTGCCTGCTCGCCTACTCCAACGCCACCATCGCCGCCGGCGACTTCTCCTCCGAGAAGATCCCGATTTACGGGTTCTACAGCAACGCGAACGCCACGACGGAGCAGGCACGGTTCAACCGCCTCGTGGCAGCGC
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| Protein seq | STVQSRWRLAVSPCPCQSPPPSRCCCSRSPAPRCRTRGGCATTRPANSRRGGAATLPVSTSSPPPSPATPRPRRTCSPPPRASARRRTRSPPSRSAAATPTPPPASPASPRPSSTSPTPAPTTRSPPSSTTPACSPTPTPPSPPATSPPRRSRFTGSTATRTPRRSRHGSTASWQR |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 1.055166 | 0.958122 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0538200 | RBH | 0.102156 | 0.105111 | 0.231902 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g35390 | RBH | 0.410155 | 0.375310 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0538400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0018050 | SBH | 0.000000 | 10.752849 | 0.092407 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0017960 | RBH | 0.0 | 3.322375 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0017930 | RBH | 0.000000 | 3.047947 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0018060 | SBH | 0.0 | 0.679471 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0017760 | SBH | 0.412422 | 3.766631 | 2.356876 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0345600 | RBH | 0.0981545 | 4.6204455 | 0.277224 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0018260 | SBH | 0.217382 | 0.298519 | 0.167195 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0358400 | RBH | 1.1841445 | 13.820534 | 1.580925 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0017940 | SBH | 0.026354 | 0.135489 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0017680 | SBH | 0.099510 | 2.096761 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0017620 | SBH | 0.283242 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0017880 | SBH | 0.418212 | 0.293664 | 1.245275 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0017660 | SBH | 0.048012 | 0.490348 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G017820 | RBH | 0.000000 | 0.778417 | 0.085370 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0018080 | SBH | 0.086080 | 8.247792 | 0.0 |
