Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_07g0017750 | OGI:07058990 | 16/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr07:20533178-20536416 | ||||||||
| Gene Symbol | RLCK235, OsRLCK235 | ||||||||||
| DNA seq | gtgcagtcacgatggcggctagccatgtcgccctgtccgtgccagtcgccgcagccgtcgcgctgctgctgctcgtgctcccccgcgccgcggagtcgtacccgtgggcgaagtgcaacgacacggccggcgacttcccggcgaggaggagcagcagctaccttgccagcatcaacctcatcgccgccaccctccccggcaacgcctccgcctcgccggacctgttcgccaccgccgagggcgtcggcgcggcgccggaccaggtgtccgccctcgcgctctgccgcggcgacgccaacgcctccacctgcctcgcctgcctcacccaggccttcctcgacctccccaacgcctgcgcctaccacaaggtcgccgccatcttctacgactcctgcctgctcgcctactccaacgccaccatcgccgccggcgacttctccaccgagaatatcccgatttacgggttcgtcagctacgcgaacgtcacgacggagcaggcccggtacaaccgcctcgtggcggcgctggtgaacgccaccgccgactacgcggcgcgcaactccacgcggcggtacgcgtccggggaggccgacttcaacagggagttccccaaggtgtacagctgggcgcagtgcacgccggacctggcgccggcgagctgccggagttgcctcgccaatatcatagggacatatattgggcatttcgagaacagcgtcgggggatttgtccgcgcggtcaggtgcagcttccagtacagtaccacgccctttctcgacggaccgatgcttgtaaggttacaaggaacgtcaggtgcctcgccggcgcaggcgccatcgccggcggccgtggtgcccgcagttaaccagacgccgccggcggcgactccgacgcttgaaggaggtgagtcaaagcgccttgtgcttaaaatggtactcattccaattcatattagctttgacttttttctagctaatttcttttaggtttgattaagtttataaaaaaattagcaacggttctgtaactctaaattagttttattatatctaacattgagttattaaatatattttgataatatatttgttttgtattaaaaatattattattttttctggtaaacttgatcaatcttaaaaaaaatAaaaaaatcaaagcggcttataaaataaaaacagaaggagtagattataaatgaattacatttcttgaaaaaaatagattaaatataattttgtgacacttacttaattacttagcctgacatgttacttctcaaaaaagttaattcagggaggaagtacagcgtccctggattggttcttataattctgctgcctacaatagcagcaataaacgttgtggttggcctctgtttctggaggaggaggcgaccagtaaaagaagcaaagcgaacatgtaagttctgcaaaactctccagtttactatacacttcaagcaaccttagatgaacaatagcttatccttttctttttcTttttttttttgtctttgatagatgccaattactccactgaagcagaggacattgagaatttagattcgatgctcatcgacatctccattttgcgatctgcaactggtgattttgcagagagtaacaagctcggtgagggcggatttggtgctgtgtacaaggtatgagAaaaaaaatgcatatatgtcagttaatcattatagaattctctcatgcttattagtgttttgtttcatgttcatagggtgtgctcccagacggctacgagatagcagtgaagagactgtcgaagagttcaacgcaaggggtggaagaactgaagaacgagctggctctggttgcgaagctgaagcacaagaaccttgtcagcctcgtcggcgtctgcttggagcaacaggagaggctgctcgtgtacgaatttgttccaaaccggagcctcgacctgatccttttcggtacaaactgagccatgtttaacctcagttttcctttgtttcttatgcaaagattggtatcatcctttgatctacaactataacacgcctatctctgtgatcaatgtcgatcagacactgagaaaagtgagcagctggactgggagaagaggtacaagatcataaacggcatcgctagaggtctgcaatacctccacgaagactctcagctcaaggtagtccatcgcgatctcaaggcgagcaacatcttgctagacgcgaatatgaaccccaagatttcagactttggcctcgcgagaattttcggtcgagatcagacccacgctgtcaccaagaatgtcatcggcacatagtaagtctagctaaagtagtacacaattcatatttctgtcatctaagtaagtagtaattacTtttttttttgaggaggtagtaattactagttaacagtaaaattatcatgttgttccagtggatacatggctcctgagtacctgacacgagggaactactctgtcaagtcagacgtatacagcttcggcgtcatggtcctcgagatcgtgacaggtaggaagaacaaccacagctacaactcccaacaatctgaagatctcttgaccatggtgagttatctgaatatctgatctgatcaccatcatcctcctcgagaggagcacatcgagtagcattttggctcatgggttttactgcaaaaatgatgcaagatctgggagcaatgggtggccgggacggtgctggagatggtcgatccgagcatgaacagcttcttctcggagagcgacgtgatgagatgcatccacattggactcctctgcgtgcagggagacccggcggagcggccggtgatgtcgtcggtggtgctgatgctcggcacggacaccgtcgagctccatgcccccgcgaagccgacgctcttcgccaggaaaggcggcgaggaatccggcgtcgcatccggcggcatgtcaatcgtgtcgttggaggagcagtcgtagatacggtagtccagtgttcgcttaccagagctaagcctgaggcctgaagaggccgtgcagaatcctacgagagaagattgtgctacagcgtgctaccgtattcatgtgtcgtagcaatttagaaatggccgccagatcttgatcggagtgatcatgaaaagatcaaatgatgatgaaattgtgtcaaactacgatctatatatgagagtaaaagtagatctttttgaacccggtttttcttcaactgaagctacatctacttattgcat
More
|
||||||||||
| CDS seq | atggcggctagccatgtcgccctgtccgtgccagtcgccgcagccgtcgcgctgctgctgctcgtgctcccccgcgccgcggagtcgtacccgtgggcgaagtgcaacgacacggccggcgacttcccggcgaggaggagcagcagctaccttgccagcatcaacctcatcgccgccaccctccccggcaacgcctccgcctcgccggacctgttcgccaccgccgagggcgtcggcgcggcgccggaccaggtgtccgccctcgcgctctgccgcggcgacgccaacgcctccacctgcctcgcctgcctcacccaggccttcctcgacctccccaacgcctgcgcctaccacaaggtcgccgccatcttctacgactcctgcctgctcgcctactccaacgccaccatcgccgccggcgacttctccaccgagaatatcccgatttacgggttcgtcagctacgcgaacgtcacgacggagcaggcccggtacaaccgcctcgtggcggcgctggtgaacgccaccgccgactacgcggcgcgcaactccacgcggcggtacgcgtccggggaggccgacttcaacagggagttccccaaggtgtacagctgggcgcagtgcacgccggacctggcgccggcgagctgccggagttgcctcgccaatatcatagggacatatattgggcatttcgagaacagcgtcgggggatttgtccgcgcggtcaggtgcagcttccagtacagtaccacgccctttctcgacggaccgatgcttgtaaggttacaaggaacgtcagatgccaattactccactgaagcagaggacattgagaatttagattcgatgctcatcgacatctccattttgcgatctgcaactggtgattttgcagagagtaacaagctcggtgagggcggatttggtgctgtgtacaagggtgtgctcccagacggctacgagatagcagtgaagagactgtcgaagagttcaacgcaaggggtggaagaactgaagaacgagctggctctggttgcgaagctgaagcacaagaaccttgtcagcctcgtcggcgtctgcttggagcaacaggagaggctgctcgttggatacatggctcctgagtacctgacacgagggaactactctgtcaagtcagacgtatacagcttcggcgtcatggtcctcgagatcgtgacaggtaggaagaacaaccacagctacaactcccaacaatctgaagatctcttgaccatgatctgggagcaatgggtggccgggacggtgctggagatggtcgatccgagcatgaacagcttcttctcggagagcgacgtgatgagatgcatccacattggactcctctgcgtgcagggagacccggcggagcggccggtgatgtcgtcggtggtgctgatgctcggcacggacaccgtcgagctccatgcccccgcgaagccgacgctcttcgccaggaaaggcggcgaggaatccggcgtcgcatccggcggcatgtcaatcgtgtcgttggaggagcagtcgtag
More
|
||||||||||
| Protein seq | MAASHVALSVPVAAAVALLLLVLPRAAESYPWAKCNDTAGDFPARRSSSYLASINLIAATLPGNASASPDLFATAEGVGAAPDQVSALALCRGDANASTCLACLTQAFLDLPNACAYHKVAAIFYDSCLLAYSNATIAAGDFSTENIPIYGFVSYANVTTEQARYNRLVAALVNATADYAARNSTRRYASGEADFNREFPKVYSWAQCTPDLAPASCRSCLANIIGTYIGHFENSVGGFVRAVRCSFQYSTTPFLDGPMLVRLQGTSDANYSTEAEDIENLDSMLIDISILRSATGDFAESNKLGEGGFGAVYKGVLPDGYEIAVKRLSKSSTQGVEELKNELALVAKLKHKNLVSLVGVCLEQQERLLVGYMAPEYLTRGNYSVKSDVYSFGVMVLEIVTGRKNNHSYNSQQSEDLLTMIWEQWVAGTVLEMVDPSMNSFFSESDVMRCIHIGLLCVQGDPAERPVMSSVVLMLGTDTVELHAPAKPTLFARKGGEESGVASGGMSIVSLEEQS |
||||||||||
| Function | Cysteine-rich receptor-like protein kinase 6 [UniProtKB/Swiss-Prot:Q0D5R3] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_07g0017750 | OsNaBo_07g0017750.01 | Chr07 | 20533178 | 20536416 | + | NAM | ||
| CDS seq | atggcggctagccatgtcgccctgtccgtgccagtcgccgcagccgtcgcgctgctgctgctcgtgctcccccgcgccgcggagtcgtacccgtgggcgaagtgcaacgacacggccggcgacttcccggcgaggaggagcagcagctaccttgccagcatcaacctcatcgccgccaccctccccggcaacgcctccgcctcgccggacctgttcgccaccgccgagggcgtcggcgcggcgccggaccaggtgtccgccctcgcgctctgccgcggcgacgccaacgcctccacctgcctcgcctgcctcacccaggccttcctcgacctccccaacgcctgcgcctaccacaaggtcgccgccatcttctacgactcctgcctgctcgcctactccaacgccaccatcgccgccggcgacttctccaccgagaatatcccgatttacgggttcgtcagctacgcgaacgtcacgacggagcaggcccggtacaaccgcctcgtggcggcgctggtgaacgccaccgccgactacgcggcgcgcaactccacgcggcggtacgcgtccggggaggccgacttcaacagggagttccccaaggtgtacagctgggcgcagtgcacgccggacctggcgccggcgagctgccggagttgcctcgccaatatcatagggacatatattgggcatttcgagaacagcgtcgggggatttgtccgcgcggtcaggtgcagcttccagtacagtaccacgccctttctcgacggaccgatgcttgtaaggttacaaggaacgtcagatgccaattactccactgaagcagaggacattgagaatttagattcgatgctcatcgacatctccattttgcgatctgcaactggtgattttgcagagagtaacaagctcggtgagggcggatttggtgctgtgtacaagggtgtgctcccagacggctacgagatagcagtgaagagactgtcgaagagttcaacgcaaggggtggaagaactgaagaacgagctggctctggttgcgaagctgaagcacaagaaccttgtcagcctcgtcggcgtctgcttggagcaacaggagaggctgctcgttggatacatggctcctgagtacctgacacgagggaactactctgtcaagtcagacgtatacagcttcggcgtcatggtcctcgagatcgtgacaggtaggaagaacaaccacagctacaactcccaacaatctgaagatctcttgaccatgatctgggagcaatgggtggccgggacggtgctggagatggtcgatccgagcatgaacagcttcttctcggagagcgacgtgatgagatgcatccacattggactcctctgcgtgcagggagacccggcggagcggccggtgatgtcgtcggtggtgctgatgctcggcacggacaccgtcgagctccatgcccccgcgaagccgacgctcttcgccaggaaaggcggcgaggaatccggcgtcgcatccggcggcatgtcaatcgtgtcgttggaggagcagtcgtag
More
|
|||||||
| Protein seq | MAASHVALSVPVAAAVALLLLVLPRAAESYPWAKCNDTAGDFPARRSSSYLASINLIAATLPGNASASPDLFATAEGVGAAPDQVSALALCRGDANASTCLACLTQAFLDLPNACAYHKVAAIFYDSCLLAYSNATIAAGDFSTENIPIYGFVSYANVTTEQARYNRLVAALVNATADYAARNSTRRYASGEADFNREFPKVYSWAQCTPDLAPASCRSCLANIIGTYIGHFENSVGGFVRAVRCSFQYSTTPFLDGPMLVRLQGTSDANYSTEAEDIENLDSMLIDISILRSATGDFAESNKLGEGGFGAVYKGVLPDGYEIAVKRLSKSSTQGVEELKNELALVAKLKHKNLVSLVGVCLEQQERLLVGYMAPEYLTRGNYSVKSDVYSFGVMVLEIVTGRKNNHSYNSQQSEDLLTMIWEQWVAGTVLEMVDPSMNSFFSESDVMRCIHIGLLCVQGDPAERPVMSSVVLMLGTDTVELHAPAKPTLFARKGGEESGVASGGMSIVSLEEQS
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 6.403131 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0538400 | SBH | 1.055166 | 0.958122 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g35390 | RBH | 0.410155 | 0.375310 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0538400 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0018050 | SBH | 0.000000 | 10.752849 | 0.092407 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0017960 | RBH | 0.0 | 3.322375 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0017930 | RBH | 0.000000 | 3.047947 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0017840 | SBH | 0.0 | 0.206698 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0017980 | RBH | 0.0 | 9.383845 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0345700 | RBH | 0.638007 | 38.1123865 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0018480 | RBH | 0.0 | 0.134970 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0359100 | RBH | 0.7896735 | 42.5786855 | 0.0614845 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0017720 | SBH | 0.000000 | 0.077913 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0017880 | RBH | 0.000000 | 8.564173 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0017760 | RBH | 0.0 | 10.376482 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0018050 | RBH | 0.0 | 0.589770 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0017840 | SBH | 0.022797 | 2.671642 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G017820 | SBH | 0.000000 | 0.778417 | 0.085370 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0017670 | SBH | 0.000000 | 26.036587 | 0.701737 |
