Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_02g0155700 | OGI:02001240 | 16/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr02:3059566-3061394 | ||||||||
| Gene Symbol | LRK3, OsLRK3, OsPSKR7, PSKR7 | ||||||||||
| DNA seq | GCACAATTACATTAGCCATAATATCTGGACAAGACTAGCTGGTCATACAACACTCCAATTCCAAAGAACACACCAAAGGCAATTGCGGAGATTGTTTTGCTGCTGCATTGTTGATCTTCAGAGATAGTTGGGATGGTGTGAGCTACCTCTACTGAACCACAAGGAGCCAACATAGATCCACATAGCTTTGGATTCCCGGCAAAACTGGAGCTTGAGAACGTGTTCATCTGGCCTCCTGTCGGAATAGGTCCTTCCAGATCATTGTCAGAAATGTTGAACTTTGAGAGAAAGTTGAGCTTGTTTAGTGCTTCAGGTATTGGGCCAGTGAGGTAGTTTCTGGACAAGTCCAGCACCTGCAAGTTTGTGAGATTGCAGATAGATGGTGGGATCTCTCCTTGTAATTGGTTAGAGCTGAAATCAAGATGAGTAAGAGCTTTCAGCTCACCAATCTTGGGTGGAATCACACTGGTAAAGCTGTTAGCACTAAGATTCAAGAGTGCAGGGAAAGATGTGACTGCACGGTATTGTCGCGATAGAGTGGTTACATACACAGGTAGATCAAATAGTATTGTTCGATGAGCTTTGTAATCATCTGATTTTAGCATGGGTATCTCTATCAAGGTGGCTGGTATTTGTCCTGTAAGGCTGTTGTTTGATACATCCAAATAGAAGAGGTTGTTGAAGGAGTTGAGCCAACTCGGCATTGGCCCAGTAAGTTGATTGTTGGATAAATCTAGTACCTCCAAATTTTTTAGCTTTGATAGCCAAAGAGGTATGTTTCCGATCAATGAGCAACGATAAATTGAGAGATGTCGAATACTCTCTAAACTTTCAATTGTCTCATCTTGTGGTATAACCTCACCCCAGAAATTCTCCCCAATAAACAGGGTAGTGAGGTTCCGGGAGCTCTTGAAAGCATGGAGTGTCTTTGCAATATCACTGAAAGAGTTTTCAGTAATTGACAGGAAAGAAAGGTACTTGAGATCACCTATTTTTGATGAGATCTCACCATGAATTTGGTTGGACGATAGCCGCAGCGCAGTCAAATTGTTGCATGAGTATATGCTTTCTGGTATTACACCACTGAAGTCATTATGCAGGAGATCCAGGGCTCTCAGATTGTGTAGGGAAGAGAAGTCAACACTGCCAAGGTCTCCACTGAAGCTGTTCATCTTCAGATCAATGGTTGTGAGACGTGTGCAGTTTCCGAGACTCGATGGTAGATTTCCTGACATGTTGTTGTTGCTCAACCTAATCACTTCCAGCTTCTTGAGCTGACCAATGGACTCCGGGATCTCACCATGTAAATTGTTGGTCGAGATGTTGAGCACCTGCAACTGCAGAGGATGCTTCAAGCCAGTCATCAACATTGGCAATGGCGGTAGCACTCCGTCGAGGCTGTTGAAGCTGACGTCGAGAACAACCAGACTCGCAGAGTACATGAGCTCCGGTGGAAGGCTACCGGAGAGAGCATTATGAGAGAGGTTGAGACGTGTCAGGCTGGTCAGACCGGCGAGGGACGACAGTGAGATGCTTCCATGGAGTCCTCGAGACTGCAGGGAAACCTCGGTGACCGTGCCTTCGTCGTCACAGACGACGCCCTCCCAGGCGTGGCAGCAATCGACGTCCGGTCGCCACGACGCAGCGAGGCCGCCGTCGTGTGACAGCCCGGCGAGGAAGCGGAGGAGGGAGCTCCTGTCCTCCTCTGTGCAGGAGCTGGCCGGAGAAGCAAAGAGTATCAGCACAAGAAGAAGGCAAAGGAAATGAGTGCAAAACCTGCTGGATGATCTGTTGCTGTAGGAAGAATGAAGTATTATTGGATTGTTCAT
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| CDS seq | ATGAACAATCCAATAATACTTCATTCTTCCTACAGCAACAGATCATCCAGCAGGTTTTGCACTCATTTCCTTTGCCTTCTTCTTGTGCTGATACTCTTTGCTTCTCCGGCCAGCTCCTGCACAGAGGAGGACAGGAGCTCCCTCCTCCGCTTCCTCGCCGGGCTGTCACACGACGGCGGCCTCGCTGCGTCGTGGCGACCGGACGTCGATTGCTGCCACGCCTGGGAGGGCGTCGTCTGTGACGACGAAGGCACGGTCACCGAGGTTTCCCTGCAGTCTCGAGGACTCCATGGAAGCATCTCACTGTCGTCCCTCGCCGGTCTGACCAGCCTGACACGTCTCAACCTCTCTCATAATGCTCTCTCCGGTAGCCTTCCACCGGAGCTCATGTACTCTGCGAGTCTGGTTGTTCTCGACGTCAGCTTCAACAGCCTCGACGGAGTGCTACCGCCATTGCCAATGTTGATGACTGGCTTGAAGCATCCTCTGCAGTTGCAGGTGCTCAACATCTCGACCAACAATTTACATGGTGAGATCCCGGAGTCCATTGGTCAGCTCAAGAAGCTGGAAGTGATTAGGTTGAGCAACAACAACATGTCAGGAAATCTACCATCGAGTCTCGGAAACTGCACACGTCTCACAACCATTGATCTGAAGATGAACAGCTTCAGTGGAGACCTTGGCAGTGTTGACTTCTCTTCCCTACACAATCTGAGAGCCCTGGATCTCCTGCATAATGACTTCAGTGGTGTAATACCAGAAAGCATATACTCATGCAACAATTTGACTGCGCTGCGGCTATCGTCCAACCAAATTCATGGTGAGATCTCATCAAAAATAGGTGATCTCAAGTACCTTTCTTTCCTGTCAATTACTGAAAACTCTTTCAGTGATATTGCAAAGACACTCCATGCTTTCAAGAGCTCCCGGAACCTCACTACCCTGTTTATTGGGGAGAATTTCTGGGGTGAGGTTATACCACAAGATGAGACAATTGAAAGTTTAGAGAGTATTCGACATCTCTCAATTTATCGTTGCTCATTGATCGGAAACATACCTCTTTGGCTATCAAAGCTAAAAAATTTGGAGGTACTAGATTTATCCAACAATCAACTTACTGGGCCAATGCCGAGTTGGCTCAACTCCTTCAACAACCTCTTCTATTTGGATGTATCAAACAACAGCCTTACAGGACAAATACCAGCCACCTTGATAGAGATACCCATGCTAAAATCAGATGATTACAAAGCTCATCGAACAATACTATTTGATCTACCTGTGTATGTAACCACTCTATCGCGACAATACCGTGCAGTCACATCTTTCCCTGCACTCTTGAATCTTAGTGCTAACAGCTTTACCAGTGTGATTCCACCCAAGATTGGTGAGCTGAAAGCTCTTACTCATCTTGATTTCAGCTCTAACCAATTACAAGGAGAGATCCCACCATCTATCTGCAATCTCACAAACTTGCAGGTGCTGGACTTGTCCAGAAACTACCTCACTGGCCCAATACCTGAAGCACTAAACAAGCTCAACTTTCTCTCAAAGTTCAACATTTCTGACAATGATCTGGAAGGACCTATTCCGACAGGAGGCCAGATGAACACGTTCTCAAGCTCCAGTTTTGCCGGGAATCCAAAGCTATGTGGATCTATGTTGGCTCCTTGTGGTTCAGTAGAGGTAGCTCACACCATCCCAACTATCTCTGAAGATCAACAATGCAGCAGCAAAACAATCTCCGCAATTGCCTTTGGTGTGTTCTTTGGAATTGGAGTGTTGTATGACCAGCTAGTCTTGTCCAGATATTATGGCTAA
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| Protein seq | MNNPIILHSSYSNRSSSRFCTHFLCLLLVLILFASPASSCTEEDRSSLLRFLAGLSHDGGLAASWRPDVDCCHAWEGVVCDDEGTVTEVSLQSRGLHGSISLSSLAGLTSLTRLNLSHNALSGSLPPELMYSASLVVLDVSFNSLDGVLPPLPMLMTGLKHPLQLQVLNISTNNLHGEIPESIGQLKKLEVIRLSNNNMSGNLPSSLGNCTRLTTIDLKMNSFSGDLGSVDFSSLHNLRALDLLHNDFSGVIPESIYSCNNLTALRLSSNQIHGEISSKIGDLKYLSFLSITENSFSDIAKTLHAFKSSRNLTTLFIGENFWGEVIPQDETIESLESIRHLSIYRCSLIGNIPLWLSKLKNLEVLDLSNNQLTGPMPSWLNSFNNLFYLDVSNNSLTGQIPATLIEIPMLKSDDYKAHRTILFDLPVYVTTLSRQYRAVTSFPALLNLSANSFTSVIPPKIGELKALTHLDFSSNQLQGEIPPSICNLTNLQVLDLSRNYLTGPIPEALNKLNFLSKFNISDNDLEGPIPTGGQMNTFSSSSFAGNPKLCGSMLAPCGSVEVAHTIPTISEDQQCSSKTISAIAFGVFFGIGVLYDQLVLSRYYG |
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| Function | Tyrosine-sulfated glycopeptide receptor 1 [UniProtKB/Swiss-Prot:Q9C7S5] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_02g0155700 | OsNip_02t0155700-00 | Chr02 | 3059566 | 3061394 | - | RAP2018-11-26 | ||
| CDS seq | ATGAACAATCCAATAATACTTCATTCTTCCTACAGCAACAGATCATCCAGCAGGTTTTGCACTCATTTCCTTTGCCTTCTTCTTGTGCTGATACTCTTTGCTTCTCCGGCCAGCTCCTGCACAGAGGAGGACAGGAGCTCCCTCCTCCGCTTCCTCGCCGGGCTGTCACACGACGGCGGCCTCGCTGCGTCGTGGCGACCGGACGTCGATTGCTGCCACGCCTGGGAGGGCGTCGTCTGTGACGACGAAGGCACGGTCACCGAGGTTTCCCTGCAGTCTCGAGGACTCCATGGAAGCATCTCACTGTCGTCCCTCGCCGGTCTGACCAGCCTGACACGTCTCAACCTCTCTCATAATGCTCTCTCCGGTAGCCTTCCACCGGAGCTCATGTACTCTGCGAGTCTGGTTGTTCTCGACGTCAGCTTCAACAGCCTCGACGGAGTGCTACCGCCATTGCCAATGTTGATGACTGGCTTGAAGCATCCTCTGCAGTTGCAGGTGCTCAACATCTCGACCAACAATTTACATGGTGAGATCCCGGAGTCCATTGGTCAGCTCAAGAAGCTGGAAGTGATTAGGTTGAGCAACAACAACATGTCAGGAAATCTACCATCGAGTCTCGGAAACTGCACACGTCTCACAACCATTGATCTGAAGATGAACAGCTTCAGTGGAGACCTTGGCAGTGTTGACTTCTCTTCCCTACACAATCTGAGAGCCCTGGATCTCCTGCATAATGACTTCAGTGGTGTAATACCAGAAAGCATATACTCATGCAACAATTTGACTGCGCTGCGGCTATCGTCCAACCAAATTCATGGTGAGATCTCATCAAAAATAGGTGATCTCAAGTACCTTTCTTTCCTGTCAATTACTGAAAACTCTTTCAGTGATATTGCAAAGACACTCCATGCTTTCAAGAGCTCCCGGAACCTCACTACCCTGTTTATTGGGGAGAATTTCTGGGGTGAGGTTATACCACAAGATGAGACAATTGAAAGTTTAGAGAGTATTCGACATCTCTCAATTTATCGTTGCTCATTGATCGGAAACATACCTCTTTGGCTATCAAAGCTAAAAAATTTGGAGGTACTAGATTTATCCAACAATCAACTTACTGGGCCAATGCCGAGTTGGCTCAACTCCTTCAACAACCTCTTCTATTTGGATGTATCAAACAACAGCCTTACAGGACAAATACCAGCCACCTTGATAGAGATACCCATGCTAAAATCAGATGATTACAAAGCTCATCGAACAATACTATTTGATCTACCTGTGTATGTAACCACTCTATCGCGACAATACCGTGCAGTCACATCTTTCCCTGCACTCTTGAATCTTAGTGCTAACAGCTTTACCAGTGTGATTCCACCCAAGATTGGTGAGCTGAAAGCTCTTACTCATCTTGATTTCAGCTCTAACCAATTACAAGGAGAGATCCCACCATCTATCTGCAATCTCACAAACTTGCAGGTGCTGGACTTGTCCAGAAACTACCTCACTGGCCCAATACCTGAAGCACTAAACAAGCTCAACTTTCTCTCAAAGTTCAACATTTCTGACAATGATCTGGAAGGACCTATTCCGACAGGAGGCCAGATGAACACGTTCTCAAGCTCCAGTTTTGCCGGGAATCCAAAGCTATGTGGATCTATGTTGGCTCCTTGTGGTTCAGTAGAGGTAGCTCACACCATCCCAACTATCTCTGAAGATCAACAATGCAGCAGCAAAACAATCTCCGCAATTGCCTTTGGTGTGTTCTTTGGAATTGGAGTGTTGTATGACCAGCTAGTCTTGTCCAGATATTATGGCTAA
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| Protein seq | MNNPIILHSSYSNRSSSRFCTHFLCLLLVLILFASPASSCTEEDRSSLLRFLAGLSHDGGLAASWRPDVDCCHAWEGVVCDDEGTVTEVSLQSRGLHGSISLSSLAGLTSLTRLNLSHNALSGSLPPELMYSASLVVLDVSFNSLDGVLPPLPMLMTGLKHPLQLQVLNISTNNLHGEIPESIGQLKKLEVIRLSNNNMSGNLPSSLGNCTRLTTIDLKMNSFSGDLGSVDFSSLHNLRALDLLHNDFSGVIPESIYSCNNLTALRLSSNQIHGEISSKIGDLKYLSFLSITENSFSDIAKTLHAFKSSRNLTTLFIGENFWGEVIPQDETIESLESIRHLSIYRCSLIGNIPLWLSKLKNLEVLDLSNNQLTGPMPSWLNSFNNLFYLDVSNNSLTGQIPATLIEIPMLKSDDYKAHRTILFDLPVYVTTLSRQYRAVTSFPALLNLSANSFTSVIPPKIGELKALTHLDFSSNQLQGEIPPSICNLTNLQVLDLSRNYLTGPIPEALNKLNFLSKFNISDNDLEGPIPTGGQMNTFSSSSFAGNPKLCGSMLAPCGSVEVAHTIPTISEDQQCSSKTISAIAFGVFFGIGVLYDQLVLSRYYG
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0691800 | SBH | 0.548103 | 0.454097 | 1.088344 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g06130 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0155700 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0004310 | SBH | 0.053326 | 2.659473 | 0.663938 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0004450 | RBH | 0.000000 | 0.000000 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0004170 | RBH | 0.137843 | 1.557139 | 0.736899 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0004200 | SBH | 0.030824 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0004230 | SBH | 1.051280 | 0.000000 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0051700 | RBH | 0.0241275 | 0.069187 | 0.0711565 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0004230 | RBH | 0.101042 | 0.0 | 0.119829 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0054000 | RBH | 0.3132295 | 0.1186905 | 0.2864165 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0004480 | RBH | 0.114553 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0004140 | RBH | 0.000000 | 0.691538 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0004420 | SBH | 0.000000 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0004370 | SBH | 0.114374 | 0.000000 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0004290 | SBH | 0.032945 | 0.534010 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G004310 | RBH | 0.850914 | 0.737580 | 0.524094 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0004010 | SBH | 0.630622 | 3.130005 | 0.941510 |
