Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_02g0009990 | OGI:02001240 | 16/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr02:7753566-7758217 | ||||||||
| Gene Symbol | OsSERL4, OsBAK1-9, Docs1 | ||||||||||
| DNA seq | gggctctttcatactgattcttgtaactgagaaaaacatgcaagatgcaatgtaattttctcgagaacatattgtaggatgggtagcatactgatttgcactgtacagtgcatacgccaacacgaccagaaatgaccgatctacctagcagttagagattggatcgtgaggcatttgcaacaccagcaaactccttgcagattccaagtaaaactacatccagactatacacgtttttgtacaattgtcatccttttgTttgtggttctcccccctgatgtacaattgtgatcatctgggaccAGatagctcaattggctctattatgaaggatgatgaatcatgaggatcctcatgccttactgagaaactgcaagatcctccatagggaggcacttctctattcaagtcgatgccgttctctggcagggtgacattagcttcaagggcattaaggacttccgacatcttgggacgcaaaatGggattggtctgagtgcattgcagaattacgtcaacagaacactccAactcggcgAaatcAaatgaatctttcagatccctgtcaaccagtttatccagtttattttcttccttgacttctctaacctgcagagaattaagattaggtggtaagaaagtatacaaggaTatgggcatcaaatgacagtagttaggtaattagataaagattgaactAaaaggagatacccAatctagaatcattcccttctgagattgcgcgtgcccattgctcaaggttttaggcccagtgatcagttccaacaagagaataccaaacccatAAacatcggtcttttctgaagactgtcctgTtgataaatactctggagcaatatgtccaatagtgcccctaactgcagtagtaacgtgtgaTtcttgtcGgtcaagaagttttgccaatccAaaatccccaacaattgcttcaaaactttcatcaagcaaaatgttagctgctttaacatccctgtgAatgaTtttaggattgcattgttcgtgaagatacagcagtcccctggctgccccaacagcaatccgcatacgcttgctccaatcaaGagatggTtttccatgatGgtaatctacaaattaactttgtgttagtaagagagtgaaatggaaaagaaatgaTagGAgaatgatgcAaaatcaACcaacacaggatcacaacacacatcTttgtaaggAagctatcatagttttacataatcatcattttagcttttggatcaacaacagtctaccttcaataagaactacaactggaaactggcccagctatattAaaacataaaatcaaaatttgttttggacgattgtaattacctctcaagcgatcagcaacactgccatttggcatataTggatatacaagcaacctttcttttgaggtcatgcagaatccatataaccgcaaaaggttcctgtgcacagctagaccAatcaactccacttctgtctgaaattgaacttcaccagtaatatcaggatcttttagtctctttacagccaccAaagctccatttctcagacagcctttataaacAAcaccaaagccaccttgacctaatatgttctttgagttgAaattgtcagttgcactctgaagctcgtgaaatgagaagtgctttagatggcccaattcaatttcAagatcttggtctagaagtaacaaaagaaaagaatgtttatcagatgctatatattctgaactctgcaataagaGagtagatgcttaaccctttgaaaattaccagcagaagcaaaaggcaagcgccatctgcaatattttagccaacAaatgacaaacagaacaaatactgtggcacagatgatgcttaatgaaattgccagagctagttgatgatggctgtttgtttttttcgacgggctagaaattgttgattctgcaaaggaaggcAaattaggtccaacagataaatatgcaagtatatgacatcaggcaaacAattaccattagttaatactgtgagatctttgcaaccatgcataattgatgAattgcaaaggaacctgtttcctgcaagactggaaatcagaggaaagtgatcatcaggagggtattAaaactgatgagaaGgaattatgtgcatatgctttgggaAGgaattatgtgcctacgcttagttagcataagaacacagaaaatatgcaggtgccaaacactttggttaagcaaatggaaggAaataagcagagcttatcgtacgcactctcaccaacttacctgtagtcatgtgcatagatttttggaaccGggccgctcaaattattggatgataaatcactgaaacaattttcccatgttggGTtaaaatcaataattacgtttatacacaacatttataacagaagagagaatatAaagtggtgaaaagagacatacaggaaTGtgagacctggaagctttgcgacatcttcaGggatctgtccagacaagttgttcttatctaggcgcctgaaggattcacaaacagaagtcatattttgggacaagcaaaatAtgtggcacAaaatttgaagcaatattttggcatctgctcacagatagtttaattcagtcagccgccctagagaacttgggatttcaccaacaaactggttaccagaaagatcaagagctttcagattggtcaacttcccaatctcTggaggaatgccacctgatatcatgttAttctgtagtaacctgaatgaagacaataaaaatgttgagtaatcAagtaatggtattttgtttcattttatgaggacagacagatgtcaagcaaacAagttcatgggaatcagtatgaatacacgatcaacttAagtatAtgacactgcaagatgtaatatgctcatgtccTtacaaataggatgaagacaatcaaatgttggacaaaccatactcataaacatttcaatgttatattcaaatatgaatcaaatgAatattctatagtggtcAcatagtaatagccttcaatccacatatgcagcacagttGatcattctaatttgtagggttagccaaaagaaacatgaatctctctacagattaagatacAtttctactAaagcagtcagttaaggtgacaATatacttccagactatttatatactaaaaataatAattgctatagaatctgcatataattttcacgtttgggtctgtagacaaactttggttatgaattctagtgctgcaaggttcagAaaaatgtttatagaacagaaaatgcactaattagtgagtcatgattatctcaactctttatatggatctatttcaatgatacttagaccaaacaaggtgagccgcacattcattattaccaggccttgaatcctgagaatgtcatttaTtTATAACTAATAGGAAGTGTGACTTGCTCACATGAAAATGGTGTTCCAATGCTAGCATTGGAAATGCTTCAGTTGTACGAAAAGTGTCATTTGCCCACATGAAGGTCTATAAAAAATATTAAAAATGGAGATGCCATGGCATGGCATCTGTCCCCCACTCTTTTCAGATGAAGAAAATGAAATTTTATTCAGAGGTGCCATGCTATGTCAGCTGTCATCTCTCAAGTGATGTATTTTACACATCTGTCTTGGCCTGGCTCTGGAGAGTAAATGTTCAGTGTTCACGGACCCTACATGGAGTTCTCCTAAGTTCAACTACAAGAGACATAGCCCATAGGGTAATGCCCTCACTTTCCAGCTCTTTAACTATGGAGGTATCAATCGATCAATCACCAATCGGATGGTACCAAATCCAAAACAACAGTTGGGGAAAACTGATCCTACCAACCCAGCTCAACTAATTTTGCAGTGCTACGACTATGAGACAATCCGTGCTCACTAATAAATGCATTAATGGAACAAGAACAAAACCTTTGCATTTGATAAGGTTCGAATGAATTCGTTCAAGAACCCCTTACATTGTCTGCAGGTGGCTGAGGTTCCCGATGCTCGGCGACAGCGTCCCGGCCAATCCGTTGTTCGCCATCTGCCTGCAGCAGCACAGCAATCCAACCAAAACCGCCATAATCAACACCACCACCACGAGCAGTAGCAGCAGCAATAACAAAATCCCACGAACGAATCAGGAGAGGGGAATCCTCACAGCGAGACGACGAATCCGTCGGGGGAGCAAggcgaccatggaccaggtgcacgggtcgacggagttgatgtcccaccctcccatcacccccttctcgtcccgcatcctgctcttcaccgccatcagcgcagccactgcaaaaaccccccacatcatatcaaaaccctaacccacctagggttcccgttccccaaccaaaacccacgctacccAacccacgcaccttcgtagttgagccccttgggcgacagcggcgggtccccggcggcggcgacggcccAcgcggcgaccaccaccgccgccgccacggcgagggcgcggggccccgccatGAgaggagtccgacggcgacgccggggagggcgaggaggaggccgcgcgggcgcagcgcagcagcggcggcggaggcggaggcggTggattgaggtgggctacgctgcagCaggagctcgggcttggcggccatgggcgcctgcgcgagtataatactgccactgt
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| CDS seq | atggcggggccccgcgccctcgccgtggcggcggcggtggtggtcgccgcgTgggccgtcgccgccgccggggacccgccgctgtcgcccaaggggctcaactacgaagtggctgcgctgatggcggtgaagagcaggatgcgggacgagaagggggtgatgggagggtgggacatcaactccgtcgacccgtgcacctggtccatggtcgccTTGCTCCCCCGACGGATTCGTCGTCTCGCTATGGCGAACAACGGATTGGCCGGGACGCTGTCGCCGAGCATCGGGAACCTCAGCCACCTGCAGACAATgttactacagaaTaacatgatatcaggtggcattcctccAgagattgggaagttgaccaatctgaaagctcttgatctttctggtaaccagtttgttggtgaaatcccaagttctctagggcggctgactgaattaaactatctgcgcctagataagaacaacttgtctggacagatccCtgaagatgtcgcaaagcttccaggtctcaCAttccttgatttatcatccaataatttgagcggccCggttccaaaaatctatgcacatgactacagtcttgcaggaaacaggttcctttgcaatTcatcaattatgcatggttgcaaagatctcacagtattaactaatgaatcaacaatttctagcccgtcgaaaaaaacaaacagccatcatcaactagctctggcaatttcattaagcatcatctgtgccacagtatttgttctgtttgtcattTgttggctaaaatattgcagatggcgcttgccttttgcttctgctgaccaagatctTgaaattgaattgggccatctaaagcacttctcatttcacgagcttcagagtgcaactgacaattTcaactcaaagaacatattaggtcaaggtggctttggtgTTgtttataaaggctgtctgagaaatggagcttTggtggctgtaaagagactaaaagatcctgatattactggtgaagttcaatttcagacagaagtggagttgatTggtctagctgtgcacaggaaccttttgcggttatatggattctgcatgacctcaaaagaaaggttgcttgtatatccAtatatgccaaatggcagtgttgctgatcgcttgagagattacCatcatggaaaAccatctCttgattggagcaagcgtatgcggattgctgttggggcagccaggggactgctgtatcttcacgaacaatgcaatcctaaaAtcatTcacagggatgttaaagcagctaacattttgcttgatgaaagttttgaagcaattgttggggatttTggattggcaaaacttcttgacCgacaagaAtcacacgttactactgcagttaggggcactattggacatattgctccagagtatttatcaAcaggacagtcttcagaaaagaccgatgtTTatgggtttggtattctcttgttggaactgatcactgggcctaaaaccttgagcaatgggcacgcgcaatctcagaagggaatgattctagatTgggttagagaagtcaaggaagaaaataaactggataaactggttgacagggatctgaaagattcattTgattTcgccgagtTggagtgttctgttgacgtaattctgcaatgcactcagaccaatccCattttgcgtcccaagatgtcggaagtccttaatgcccttgaagctaatgtcaccctgccagagaacggcatcgacttgaatagagaagtgcctccctatggaggatcttgcagtttctcagtaaggcatgaggatcctcatgattcatcatccttcataatagagccaattgagctatCTggtcccagatga
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| Protein seq | MAGPRALAVAAAVVVAAWAVAAAGDPPLSPKGLNYEVAALMAVKSRMRDEKGVMGGWDINSVDPCTWSMVALLPRRIRRLAMANNGLAGTLSPSIGNLSHLQTMLLQNNMISGGIPPEIGKLTNLKALDLSGNQFVGEIPSSLGRLTELNYLRLDKNNLSGQIPEDVAKLPGLTFLDLSSNNLSGPVPKIYAHDYSLAGNRFLCNSSIMHGCKDLTVLTNESTISSPSKKTNSHHQLALAISLSIICATVFVLFVICWLKYCRWRLPFASADQDLEIELGHLKHFSFHELQSATDNFNSKNILGQGGFGVVYKGCLRNGALVAVKRLKDPDITGEVQFQTEVELIGLAVHRNLLRLYGFCMTSKERLLVYPYMPNGSVADRLRDYHHGKPSLDWSKRMRIAVGAARGLLYLHEQCNPKIIHRDVKAANILLDESFEAIVGDFGLAKLLDRQESHVTTAVRGTIGHIAPEYLSTGQSSEKTDVYGFGILLLELITGPKTLSNGHAQSQKGMILDWVREVKEENKLDKLVDRDLKDSFDFAELECSVDVILQCTQTNPILRPKMSEVLNALEANVTLPENGIDLNREVPPYGGSCSFSVRHEDPHDSSSFIIEPIELSGPR |
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| Function | Probable LRR receptor-like serine/threonine-protein kinase At5g45780 [UniProtKB/Swiss-Prot:C0LGU5] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_02g0009990 | OsNaBo_02g0009990.01 | Chr02 | 7753566 | 7758209 | - | NAM | ||
| CDS seq | atggcggggccccgcgccctcgccgtggcggcggcggtggtggtcgccgcgTgggccgtcgccgccgccggggacccgccgctgtcgcccaaggggctcaactacgaagtggctgcgctgatggcggtgaagagcaggatgcgggacgagaagggggtgatgggagggtgggacatcaactccgtcgacccgtgcacctggtccatggtcgccTTGCTCCCCCGACGGATTCGTCGTCTCGCTATGGCGAACAACGGATTGGCCGGGACGCTGTCGCCGAGCATCGGGAACCTCAGCCACCTGCAGACAATgttactacagaaTaacatgatatcaggtggcattcctccAgagattgggaagttgaccaatctgaaagctcttgatctttctggtaaccagtttgttggtgaaatcccaagttctctagggcggctgactgaattaaactatctgcgcctagataagaacaacttgtctggacagatccCtgaagatgtcgcaaagcttccaggtctcaCAttccttgatttatcatccaataatttgagcggccCggttccaaaaatctatgcacatgactacagtcttgcaggaaacaggttcctttgcaatTcatcaattatgcatggttgcaaagatctcacagtattaactaatgaatcaacaatttctagcccgtcgaaaaaaacaaacagccatcatcaactagctctggcaatttcattaagcatcatctgtgccacagtatttgttctgtttgtcattTgttggctaaaatattgcagatggcgcttgccttttgcttctgctgaccaagatctTgaaattgaattgggccatctaaagcacttctcatttcacgagcttcagagtgcaactgacaattTcaactcaaagaacatattaggtcaaggtggctttggtgTTgtttataaaggctgtctgagaaatggagcttTggtggctgtaaagagactaaaagatcctgatattactggtgaagttcaatttcagacagaagtggagttgatTggtctagctgtgcacaggaaccttttgcggttatatggattctgcatgacctcaaaagaaaggttgcttgtatatccAtatatgccaaatggcagtgttgctgatcgcttgagagattacCatcatggaaaAccatctCttgattggagcaagcgtatgcggattgctgttggggcagccaggggactgctgtatcttcacgaacaatgcaatcctaaaAtcatTcacagggatgttaaagcagctaacattttgcttgatgaaagttttgaagcaattgttggggatttTggattggcaaaacttcttgacCgacaagaAtcacacgttactactgcagttaggggcactattggacatattgctccagagtatttatcaAcaggacagtcttcagaaaagaccgatgtTTatgggtttggtattctcttgttggaactgatcactgggcctaaaaccttgagcaatgggcacgcgcaatctcagaagggaatgattctagatTgggttagagaagtcaaggaagaaaataaactggataaactggttgacagggatctgaaagattcattTgattTcgccgagtTggagtgttctgttgacgtaattctgcaatgcactcagaccaatccCattttgcgtcccaagatgtcggaagtccttaatgcccttgaagctaatgtcaccctgccagagaacggcatcgacttgaatagagaagtgcctccctatggaggatcttgcagtttctcagtaaggcatgaggatcctcatgattcatcatccttcataatagagccaattgagctatCTggtcccagatga
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| Protein seq | MAGPRALAVAAAVVVAAWAVAAAGDPPLSPKGLNYEVAALMAVKSRMRDEKGVMGGWDINSVDPCTWSMVALLPRRIRRLAMANNGLAGTLSPSIGNLSHLQTMLLQNNMISGGIPPEIGKLTNLKALDLSGNQFVGEIPSSLGRLTELNYLRLDKNNLSGQIPEDVAKLPGLTFLDLSSNNLSGPVPKIYAHDYSLAGNRFLCNSSIMHGCKDLTVLTNESTISSPSKKTNSHHQLALAISLSIICATVFVLFVICWLKYCRWRLPFASADQDLEIELGHLKHFSFHELQSATDNFNSKNILGQGGFGVVYKGCLRNGALVAVKRLKDPDITGEVQFQTEVELIGLAVHRNLLRLYGFCMTSKERLLVYPYMPNGSVADRLRDYHHGKPSLDWSKRMRIAVGAARGLLYLHEQCNPKIIHRDVKAANILLDESFEAIVGDFGLAKLLDRQESHVTTAVRGTIGHIAPEYLSTGQSSEKTDVYGFGILLLELITGPKTLSNGHAQSQKGMILDWVREVKEENKLDKLVDRDLKDSFDFAELECSVDVILQCTQTNPILRPKMSEVLNALEANVTLPENGIDLNREVPPYGGSCSFSVRHEDPHDSSSFIIEPIELSGPR
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_02g0009990 | OsNaBo_02g0009990.02 | Chr02 | 7753590 | 7758217 | - | IsoSeq | ||
| CDS seq | ATGGCGAACAACGGATTGGCCGGGACGCTGTCGCCGAGCATCGGGAACCTCAGCCACCTGCAGACAATgttactacagaaTaacatgatatcaggtggcattcctccAgagattgggaagttgaccaatctgaaagctcttgatctttctggtaaccagtttgttggtgaaatcccaagttctctagggcggctgactgaattaaactatctgcgcctagataagaacaacttgtctggacagatccCtgaagatgtcgcaaagcttccaggtctcaCAttccttgatttatcatccaataatttgagcggccCggttccaaaaatctatgcacatgactacagtcttgcaggaaacaggttcctttgcaatTcatcaattatgcatggttgcaaagatctcacagtattaactaatgaatcaacaatttctagcccgtcgaaaaaaacaaacagccatcatcaactagctctggcaatttcattaagcatcatctgtgccacagtatttgttctgtttgtcattTgttggctaaaatattgcagatggcgcttgccttttgcttctgctgaccaagatctTgaaattgaattgggccatctaaagcacttctcatttcacgagcttcagagtgcaactgacaattTcaactcaaagaacatattaggtcaaggtggctttggtgTTgtttataaaggctgtctgagaaatggagcttTggtggctgtaaagagactaaaagatcctgatattactggtgaagttcaatttcagacagaagtggagttgatTggtctagctgtgcacaggaaccttttgcggttatatggattctgcatgacctcaaaagaaaggttgcttgtatatccAtatatgccaaatggcagtgttgctgatcgcttgagagattacCatcatggaaaAccatctCttgattggagcaagcgtatgcggattgctgttggggcagccaggggactgctgtatcttcacgaacaatgcaatcctaaaAtcatTcacagggatgttaaagcagctaacattttgcttgatgaaagttttgaagcaattgttggggatttTggattggcaaaacttcttgacCgacaagaAtcacacgttactactgcagttaggggcactattggacatattgctccagagtatttatcaAcaggacagtcttcagaaaagaccgatgtTTatgggtttggtattctcttgttggaactgatcactgggcctaaaaccttgagcaatgggcacgcgcaatctcagaagggaatgattctagatTgggttagagaagtcaaggaagaaaataaactggataaactggttgacagggatctgaaagattcattTgattTcgccgagtTggagtgttctgttgacgtaattctgcaatgcactcagaccaatccCattttgcgtcccaagatgtcggaagtccttaatgcccttgaagctaatgtcaccctgccagagaacggcatcgacttgaatagagaagtgcctccctatggaggatcttgcagtttctcagtaaggcatgaggatcctcatgattcatcatccttcataatagagccaattgagctatCTggtccc
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| Protein seq | MANNGLAGTLSPSIGNLSHLQTMLLQNNMISGGIPPEIGKLTNLKALDLSGNQFVGEIPSSLGRLTELNYLRLDKNNLSGQIPEDVAKLPGLTFLDLSSNNLSGPVPKIYAHDYSLAGNRFLCNSSIMHGCKDLTVLTNESTISSPSKKTNSHHQLALAISLSIICATVFVLFVICWLKYCRWRLPFASADQDLEIELGHLKHFSFHELQSATDNFNSKNILGQGGFGVVYKGCLRNGALVAVKRLKDPDITGEVQFQTEVELIGLAVHRNLLRLYGFCMTSKERLLVYPYMPNGSVADRLRDYHHGKPSLDWSKRMRIAVGAARGLLYLHEQCNPKIIHRDVKAANILLDESFEAIVGDFGLAKLLDRQESHVTTAVRGTIGHIAPEYLSTGQSSEKTDVYGFGILLLELITGPKTLSNGHAQSQKGMILDWVREVKEENKLDKLVDRDLKDSFDFAELECSVDVILQCTQTNPILRPKMSEVLNALEANVTLPENGIDLNREVPPYGGSCSFSVRHEDPHDSSSFIIEPIELSGP
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| A3 | Chr02 | 7757602 | 7757720 | - | OsNaBo_02g0009990.02 | OsNaBo_02g0009990.02,OsNaBo_02g0009990.01 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 1.796530 | 15.403075 | 7.955040 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0236100 | SBH | 1.613699 | 1.751990 | 2.221083 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g14120 | RBH | 0.851935 | 0.954115 | 0.456294 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0236100 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0010120 | SBH | 0.653671 | 6.715620 | 3.102635 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0010200 | SBH | 0.165752 | 2.775082 | 2.160669 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0010070 | SBH | 2.651315 | 7.964316 | 9.238035 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0009900 | SBH | 0.302680 | 0.120888 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0010040 | RBH | 4.523839 | 8.575912 | 6.772154 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0128200 | SBH | 6.857015 | 15.16552 | 21.7798425 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0009800 | SBH | 0.373663 | 0.357955 | 0.526127 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0131900 | RBH | 5.8494675 | 17.3226815 | 21.220208 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0010300 | SBH | 0.312992 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0003980 | SBH | 0.070042 | 4.234505 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0004260 | SBH | 3.191976 | 29.049385 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0004210 | SBH | 0.087713 | 0.227309 | 0.100002 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0009970 | SBH | 0.424147 | 3.415332 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G004060 | SBH | 0.292437 | 2.052631 | 0.572981 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0019630 | SBH | 0.769279 | 11.668097 | 2.829287 |
