Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_06g0019630 | OGI:06063770 | 16/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr06:22393952-22396999 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | atgatccgtctggagacgcagagtcatgctttgcatccttgtctcctcatactagtatgcggtttagcattagccagcagccgcgaaactgatactgagaacgaccgacaagctctcctctgcttcaagtcccagctctccgacccagccaaagccttatcatcatggagcaacacatccaagcaattctgcaactggcatggtgtcacttgcactgcacaatcgcccaggcgtgtcactgcggtagacctcatatcggaaggcctgattggctccatatcatcttgcatctctaaccttacctctcttacaaggttgcaattgtcagacaatagcttcaatggcgccataccgtccaaccttggtcttctgatcaacctcagctacctcaacctcagcatgaactctctcagtggtgaaatcccatctgggctctcgtcatgcgcccaacttggcgtcctcagcctatggaacaactccctacaaggtgagatcccacaaacgctgagccgatgcataaatattcgagagataaaccttagcaataacaagttgcaaggcagcattcctgttggttttgggacgctcccgaagcttgaaaccttgatcttagcaggcaacagcctattcggaaacataccaccatccttgggaggcagctcatctcttatatatgttgatcttggtggcaacagccttactggtgaaatccctgagtccttgggtaatagctcgtctctccaagtacttcggctaatgagcaataggcttactggcaagctcccagaagttatgttcaatagcttatcccttaccacaatttgcctccaaaagaacatcattgttggttctataccgcaagtcacaaccatctcctcccctttgaaataccttagtttaattgagaatggcctctcaggacaaatgccttcatcattaggaaacctctcttcccttattctcttagatatttcattcaacaatttggttgggagcattcccgagagcttaggccacatcctaagactggaaactctcaaattaaacatcaacaacttatctgggcttgtaccgccgtcactgtacaatatgtcatcactcaaaattctcggactggcaaataactcactgatcggaacattaccttcaaacatgggctacagtctaccaaacatccagaaattaatattctcatcaaacagatttcatggagaaatcccaacgtctcttattaatgcttcacaactagaaatgatatacatatatgataacagcctgaccggtttaattccatccttcggatcgttgaagttcttaactgttcttgatgtggggggcaatatgctagaagcaggcaactggggtttcctctcctccctctcaaattgctcaggattgactaccctgatgatagattcgaatagtctccaaggaagcttacccttgtcgattggtagtcttccactcagtcttgagaggctgtggtttagagtgaacaaaatttctgggcccattccgatggagattggtaatcttaagaacctcaccgagttaattattgcccacaatcttatcaatggtagcataccgccaactctcgtaaacttacgtaacttggttatattaggacttgaacataataatctttctggccacttgcccgacttcatggggaactttattcaattgaatgatatcagtttagaggtgaacaacttgaatggaagtatacctactagcatcggtcactgcaggcagctgtccaaagtaaatctttctcataattcacttgttggaagcataccaagcgagctcttcaaaatttcttcacttactgattatttagacttgtcacacaatcacttgtctggagaaataccggaggaagttggaaacctcattaatctcaataaacttgttatctcaaacaacaggctctctggtaagattccatccactctcagccagtgtgtacttttagagtctcttcaaatccaaagtaacttccttgaaggaagtattccacaatctttcacgaaattggtaggaatgaaggaaatggatctttcccataataatttatcaggagaagtccccagcttcctcgcgtctatgagcaatctccttgttcttaatttatccttcaataattttgaagggatggttccacaaggtggtatttttagcaacggcagtattgtgctcctcgaaggaaataataggctgtgttcaagtgttccagcgttaggtctgcctacctgctccaaaccagtcgaccacAaaaggaggcactattccttggctgggaagttagtaacactggttgttattgcttgtgccgttttgtcatgccttcttgcagtaatgcttaagagaaagaagaggcaatcagtaccaagttccgaacagtccgaccaagatatgaagcggataacatttcaagacatcgcaaaagcaacaaaccaattctcttttgcaaacttagtcggtgcaggatcatttggaagtgtttataagggttctttggaacttgaggacaatacagtagctatcaaggtttttaaccttaacaTttttggagccaacatgagcttcaatgcagaatgtgaaaccctcaagaatatccgccatcgtaatttagtcaaggtcattacttcatgctcttcagtcgatttgtcagggaacgaatttaaggctctcatttacaagtacatgcccaatgggaacctagaaatgtggctgcaccacaatgtccatgaacagggtcaaaggaagactataagtttgagtcaaaggattaacatagccttggatgtagctcttgctttggattatcttcataatcaatgtggataccatatagttcactgtgatttgaagccaagcaatattcttttggatcttgagatgactgcatgtgtaggagacttcggccttgcaagatttttatgcagtagatccgatgcacaacaaattgattcagcaaccttagctcgcctaaaaggatccatcggatacatagcaccaggtgagatacttatttggtaa
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| CDS seq | atgatccgtctggagacgcagagtcatgctttgcatccttgtctcctcatactagtatgcggtttagcattagccagcagccgcgaaactgatactgagaacgaccgacaagctctcctctgcttcaagtcccagctctccgacccagccaaagccttatcatcatggagcaacacatccaagcaattctgcaactggcatggtgtcacttgcactgcacaatcgcccaggcgtgtcactgcggtagacctcatatcggaaggcctgattggctccatatcatcttgcatctctaaccttacctctcttacaaggttgcaattgtcagacaatagcttcaatggcgccataccgtccaaccttggtcttctgatcaacctcagctacctcaacctcagcatgaactctctcagtggtgaaatcccatctgggctctcgtcatgcgcccaacttggcgtcctcagcctatggaacaactccctacaaggtgagatcccacaaacgctgagccgatgcataaatattcgagagataaaccttagcaataacaagttgcaaggcagcattcctgttggttttgggacgctcccgaagcttgaaaccttgatcttagcaggcaacagcctattcggaaacataccaccatccttgggaggcagctcatctcttatatatgttgatcttggtggcaacagccttactggtgaaatccctgagtccttgggtaatagctcgtctctccaagtacttcggctaatgagcaataggcttactggcaagctcccagaagttatgttcaatagcttatcccttaccacaatttgcctccaaaagaacatcattgttggttctataccgcaagtcacaaccatctcctcccctttgaaataccttagtttaattgagaatggcctctcaggacaaatgccttcatcattaggaaacctctcttcccttattctcttagatatttcattcaacaatttggttgggagcattcccgagagcttaggccacatcctaagactggaaactctcaaattaaacatcaacaacttatctgggcttgtaccgccgtcactgtacaatatgtcatcactcaaaattctcggactggcaaataactcactgatcggaacattaccttcaaacatgggctacagtctaccaaacatccagaaattaatattctcatcaaacagatttcatggagaaatcccaacgtctcttattaatgcttcacaactagaaatgatatacatatatgataacagcctgaccggtttaattccatccttcggatcgttgaagttcttaactgttcttgatgtggggggcaatatgctagaagcaggcaactggggtttcctctcctccctctcaaattgctcaggattgactaccctgatgatagattcgaatagtctccaaggaagcttacccttgtcgattggtagtcttccactcagtcttgagaggctgtggtttagagtgaacaaaatttctgggcccattccgatggagattggtaatcttaagaacctcaccgagttaattattgcccacaatcttatcaatggtagcataccgccaactctcgtaaacttacgtaacttggttatattaggacttgaacataataatctttctggccacttgcccgacttcatggggaactttattcaattgaatgatatcagtttagaggtgaacaacttgaatggaagtatacctactagcatcggtcactgcaggcagctgtccaaagtaaatctttctcataattcacttgttggaagcataccaagcgagctcttcaaaatttcttcacttactgattatttagacttgtcacacaatcacttgtctggagaaataccggaggaagttggaaacctcattaatctcaataaacttgttatctcaaacaacaggctctctggtaagattccatccactctcagccagtgtgtacttttagagtctcttcaaatccaaagtaacttccttgaaggaagtattccacaatctttcacgaaattggtaggaatgaaggaaatggatctttcccataataatttatcaggagaagtccccagcttcctcgcgtctatgagcaatctccttgttcttaatttatccttcaataattttgaagggatggttccacaaggtggtatttttagcaacggcagtattgtgctcctcgaaggaaataataggctgtgttcaagtgttccagcgttaggtctgcctacctgctccaaaccagtcgaccacAaaaggaggcactattccttggctgggaagttagtaacactggttgttattgcttgtgccgttttgtcatgccttcttgcagtaatgcttaagagaaagaagaggcaatcagtaccaagttccgaacagtccgaccaagatatgaagcggataacatttcaagacatcgcaaaagcaacaaaccaattctcttttgcaaacttagtcggtgcaggatcatttggaagtgtttataagggttctttggaacttgaggacaatacagtagctatcaaggtttttaaccttaacaTttttggagccaacatgagcttcaatgcagaatgtgaaaccctcaagaatatccgccatcgtaatttagtcaaggtcattacttcatgctcttcagtcgatttgtcagggaacgaatttaaggctctcatttacaagtacatgcccaatgggaacctagaaatgtggctgcaccacaatgtccatgaacagggtcaaaggaagactataagtttgagtcaaaggattaacatagccttggatgtagctcttgctttggattatcttcataatcaatgtggataccatatagttcactgtgatttgaagccaagcaatattcttttggatcttgagatgactgcatgtgtaggagacttcggccttgcaagatttttatgcagtagatccgatgcacaacaaattgattcagcaaccttagctcgcctaaaaggatccatcggatacatagcaccaggtgagatacttatttggtaa
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| Protein seq | MIRLETQSHALHPCLLILVCGLALASSRETDTENDRQALLCFKSQLSDPAKALSSWSNTSKQFCNWHGVTCTAQSPRRVTAVDLISEGLIGSISSCISNLTSLTRLQLSDNSFNGAIPSNLGLLINLSYLNLSMNSLSGEIPSGLSSCAQLGVLSLWNNSLQGEIPQTLSRCINIREINLSNNKLQGSIPVGFGTLPKLETLILAGNSLFGNIPPSLGGSSSLIYVDLGGNSLTGEIPESLGNSSSLQVLRLMSNRLTGKLPEVMFNSLSLTTICLQKNIIVGSIPQVTTISSPLKYLSLIENGLSGQMPSSLGNLSSLILLDISFNNLVGSIPESLGHILRLETLKLNINNLSGLVPPSLYNMSSLKILGLANNSLIGTLPSNMGYSLPNIQKLIFSSNRFHGEIPTSLINASQLEMIYIYDNSLTGLIPSFGSLKFLTVLDVGGNMLEAGNWGFLSSLSNCSGLTTLMIDSNSLQGSLPLSIGSLPLSLERLWFRVNKISGPIPMEIGNLKNLTELIIAHNLINGSIPPTLVNLRNLVILGLEHNNLSGHLPDFMGNFIQLNDISLEVNNLNGSIPTSIGHCRQLSKVNLSHNSLVGSIPSELFKISSLTDYLDLSHNHLSGEIPEEVGNLINLNKLVISNNRLSGKIPSTLSQCVLLESLQIQSNFLEGSIPQSFTKLVGMKEMDLSHNNLSGEVPSFLASMSNLLVLNLSFNNFEGMVPQGGIFSNGSIVLLEGNNRLCSSVPALGLPTCSKPVDHKRRHYSLAGKLVTLVVIACAVLSCLLAVMLKRKKRQSVPSSEQSDQDMKRITFQDIAKATNQFSFANLVGAGSFGSVYKGSLELEDNTVAIKVFNLNIFGANMSFNAECETLKNIRHRNLVKVITSCSSVDLSGNEFKALIYKYMPNGNLEMWLHHNVHEQGQRKTISLSQRINIALDVALALDYLHNQCGYHIVHCDLKPSNILLDLEMTACVGDFGLARFLCSRSDAQQIDSATLARLKGSIGYIAPGEILIW |
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| Function | Receptor kinase-like protein Xa21 [UniProtKB/Swiss-Prot:Q1MX30] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_06g0019630 | OsNaBo_06g0019630.01 | Chr06 | 22393952 | 22396999 | + | NAM | ||
| CDS seq | atgatccgtctggagacgcagagtcatgctttgcatccttgtctcctcatactagtatgcggtttagcattagccagcagccgcgaaactgatactgagaacgaccgacaagctctcctctgcttcaagtcccagctctccgacccagccaaagccttatcatcatggagcaacacatccaagcaattctgcaactggcatggtgtcacttgcactgcacaatcgcccaggcgtgtcactgcggtagacctcatatcggaaggcctgattggctccatatcatcttgcatctctaaccttacctctcttacaaggttgcaattgtcagacaatagcttcaatggcgccataccgtccaaccttggtcttctgatcaacctcagctacctcaacctcagcatgaactctctcagtggtgaaatcccatctgggctctcgtcatgcgcccaacttggcgtcctcagcctatggaacaactccctacaaggtgagatcccacaaacgctgagccgatgcataaatattcgagagataaaccttagcaataacaagttgcaaggcagcattcctgttggttttgggacgctcccgaagcttgaaaccttgatcttagcaggcaacagcctattcggaaacataccaccatccttgggaggcagctcatctcttatatatgttgatcttggtggcaacagccttactggtgaaatccctgagtccttgggtaatagctcgtctctccaagtacttcggctaatgagcaataggcttactggcaagctcccagaagttatgttcaatagcttatcccttaccacaatttgcctccaaaagaacatcattgttggttctataccgcaagtcacaaccatctcctcccctttgaaataccttagtttaattgagaatggcctctcaggacaaatgccttcatcattaggaaacctctcttcccttattctcttagatatttcattcaacaatttggttgggagcattcccgagagcttaggccacatcctaagactggaaactctcaaattaaacatcaacaacttatctgggcttgtaccgccgtcactgtacaatatgtcatcactcaaaattctcggactggcaaataactcactgatcggaacattaccttcaaacatgggctacagtctaccaaacatccagaaattaatattctcatcaaacagatttcatggagaaatcccaacgtctcttattaatgcttcacaactagaaatgatatacatatatgataacagcctgaccggtttaattccatccttcggatcgttgaagttcttaactgttcttgatgtggggggcaatatgctagaagcaggcaactggggtttcctctcctccctctcaaattgctcaggattgactaccctgatgatagattcgaatagtctccaaggaagcttacccttgtcgattggtagtcttccactcagtcttgagaggctgtggtttagagtgaacaaaatttctgggcccattccgatggagattggtaatcttaagaacctcaccgagttaattattgcccacaatcttatcaatggtagcataccgccaactctcgtaaacttacgtaacttggttatattaggacttgaacataataatctttctggccacttgcccgacttcatggggaactttattcaattgaatgatatcagtttagaggtgaacaacttgaatggaagtatacctactagcatcggtcactgcaggcagctgtccaaagtaaatctttctcataattcacttgttggaagcataccaagcgagctcttcaaaatttcttcacttactgattatttagacttgtcacacaatcacttgtctggagaaataccggaggaagttggaaacctcattaatctcaataaacttgttatctcaaacaacaggctctctggtaagattccatccactctcagccagtgtgtacttttagagtctcttcaaatccaaagtaacttccttgaaggaagtattccacaatctttcacgaaattggtaggaatgaaggaaatggatctttcccataataatttatcaggagaagtccccagcttcctcgcgtctatgagcaatctccttgttcttaatttatccttcaataattttgaagggatggttccacaaggtggtatttttagcaacggcagtattgtgctcctcgaaggaaataataggctgtgttcaagtgttccagcgttaggtctgcctacctgctccaaaccagtcgaccacAaaaggaggcactattccttggctgggaagttagtaacactggttgttattgcttgtgccgttttgtcatgccttcttgcagtaatgcttaagagaaagaagaggcaatcagtaccaagttccgaacagtccgaccaagatatgaagcggataacatttcaagacatcgcaaaagcaacaaaccaattctcttttgcaaacttagtcggtgcaggatcatttggaagtgtttataagggttctttggaacttgaggacaatacagtagctatcaaggtttttaaccttaacaTttttggagccaacatgagcttcaatgcagaatgtgaaaccctcaagaatatccgccatcgtaatttagtcaaggtcattacttcatgctcttcagtcgatttgtcagggaacgaatttaaggctctcatttacaagtacatgcccaatgggaacctagaaatgtggctgcaccacaatgtccatgaacagggtcaaaggaagactataagtttgagtcaaaggattaacatagccttggatgtagctcttgctttggattatcttcataatcaatgtggataccatatagttcactgtgatttgaagccaagcaatattcttttggatcttgagatgactgcatgtgtaggagacttcggccttgcaagatttttatgcagtagatccgatgcacaacaaattgattcagcaaccttagctcgcctaaaaggatccatcggatacatagcaccaggtgagatacttatttggtaa
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| Protein seq | MIRLETQSHALHPCLLILVCGLALASSRETDTENDRQALLCFKSQLSDPAKALSSWSNTSKQFCNWHGVTCTAQSPRRVTAVDLISEGLIGSISSCISNLTSLTRLQLSDNSFNGAIPSNLGLLINLSYLNLSMNSLSGEIPSGLSSCAQLGVLSLWNNSLQGEIPQTLSRCINIREINLSNNKLQGSIPVGFGTLPKLETLILAGNSLFGNIPPSLGGSSSLIYVDLGGNSLTGEIPESLGNSSSLQVLRLMSNRLTGKLPEVMFNSLSLTTICLQKNIIVGSIPQVTTISSPLKYLSLIENGLSGQMPSSLGNLSSLILLDISFNNLVGSIPESLGHILRLETLKLNINNLSGLVPPSLYNMSSLKILGLANNSLIGTLPSNMGYSLPNIQKLIFSSNRFHGEIPTSLINASQLEMIYIYDNSLTGLIPSFGSLKFLTVLDVGGNMLEAGNWGFLSSLSNCSGLTTLMIDSNSLQGSLPLSIGSLPLSLERLWFRVNKISGPIPMEIGNLKNLTELIIAHNLINGSIPPTLVNLRNLVILGLEHNNLSGHLPDFMGNFIQLNDISLEVNNLNGSIPTSIGHCRQLSKVNLSHNSLVGSIPSELFKISSLTDYLDLSHNHLSGEIPEEVGNLINLNKLVISNNRLSGKIPSTLSQCVLLESLQIQSNFLEGSIPQSFTKLVGMKEMDLSHNNLSGEVPSFLASMSNLLVLNLSFNNFEGMVPQGGIFSNGSIVLLEGNNRLCSSVPALGLPTCSKPVDHKRRHYSLAGKLVTLVVIACAVLSCLLAVMLKRKKRQSVPSSEQSDQDMKRITFQDIAKATNQFSFANLVGAGSFGSVYKGSLELEDNTVAIKVFNLNIFGANMSFNAECETLKNIRHRNLVKVITSCSSVDLSGNEFKALIYKYMPNGNLEMWLHHNVHEQGQRKTISLSQRINIALDVALALDYLHNQCGYHIVHCDLKPSNILLDLEMTACVGDFGLARFLCSRSDAQQIDSATLARLKGSIGYIAPGEILIW
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.769279 | 11.668097 | 2.829287 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0586150 | SBH | 0.543865 | 0.402507 | 0.170149 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g38670 | SBH | 0.332005 | 0.244379 | 0.039538 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os06g0586150 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_06g0020780 | SBH | 0.134115 | 1.062366 | 0.983788 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0020680 | SBH | 0.076650 | 0.659555 | 0.356115 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0020730 | SBH | 0.119523 | 0.974873 | 2.135322 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0020540 | SBH | 0.0 | 0.024653 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0020830 | SBH | 0.318380 | 0.370122 | 1.666568 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_06G0336700 | SBH | 0.483078 | 2.3404795 | 0.082032 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0020420 | SBH | 0.0 | 0.162646 | 0.125249 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0334400 | SBH | 0.3506075 | 7.301107 | 0.597278 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_06g0020740 | SBH | 0.0 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0019760 | RBH | 1.567951 | 4.968778 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0020440 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_06g0021120 | SBH | 0.042714 | 0.133546 | 0.067458 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0020660 | SBH | 0.049091 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G019450 | RBH | 0.554590 | 0.163884 | 1.131402 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0009740 | RBH | 0.0 | 0.0 | 0.0 |
