Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_01g0023430 | OGI:01013090 | 16/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr01:24293424-24294605 | ||||||||
| Gene Symbol | OsLRP, OsLRR1, LRR1 | ||||||||||
| DNA seq | atgatcaacgaaccagaaaatttagaaacatggttcctatttggagtggcactggaaaacggattcggagctttcgatgtattcggcctgttccattatagcatatcatttgttctgcaaggtcaacaacttgaatacagcaagggacttgtgtacttggtgggccttgatttttctagcaacaaattgtctggccatattccaaaggggattggttctcttgtcgaattggtaaatttgaatctgtcctggaaccagttagcaggaaacattccggatcagattggtgagctgcaccaattaacctcccttgacctatcatataatcaattttctggagaaatcccttcaagcctatcaaatttgacattcttgagctatctgaacttgtcttacaacaatttatcgggaaggattcctcggggacatcaactggacacactcaatgcagatgatccatctttgatgtacatcggcaacccaggtctttgtggttatccccttgcaaagaattgtcctgaaaatgggacatctcaaggtcaaaccgttaaaagacatcacgatggttcgttcTGtgctGgtctcagtgtggggtttgtgattggagtttggatggttcttgcgtcacttttgttcaagaagagttggaggttttcttactttcaccactttgataggcagtatgacagattgaatgtgtttcttactgtcacttcagcgatatacctccaaaaggctacacGatttaaggatggaagaagctgagtggattcctacatataagggctttctacctgagaaaattttctcgtacttgagaaggtaccgagagcaactatattttctagActaaaacatgtggaacttctcgatatcttctcaaagatcatctaatcaatcggaagttgaaaaataatcctacattacatcTttgtaatattagcccaTGtgtggctctctatgttgccttcttgtcttgttttcaagcactcgtattagacaataataatctcgcagcatatcgtgcacaaaattttacgtgtatgagttttgTttcaatcacttcctttgatcaatataTATtcaatctgttagttcattctgagctcatgttatgagcccctatatatattaactatgttagttgacttacgttcacagcagtggccaaaagatgaatga
More
|
||||||||||
| CDS seq | atgatcaacgaaccagaaaatttagaaacatggttcctatttggagtggcactggaaaacggattcggagctttcgatgtattcggcctgttccattatagcatatcatttgttctgcaaggtcaacaacttgaatacagcaagggacttgtgtacttggtgggccttgatttttctagcaacaaattgtctggccatattccaaaggggattggttctcttgtcgaattggtaaatttgaatctgtcctggaaccagttagcaggaaacattccggatcagattggtgagctgcaccaattaacctcccttgacctatcatataatcaattttctggagaaatcccttcaagcctatcaaatttgacattcttgagctatctgaacttgtcttacaacaatttatcgggaaggattcctcggggacatcaactggacacactcaatgcagatgatccatctttgatgtacatcggcaacccaggtctttgtggttatccccttgcaaagaattgtcctgaaaatgggacatctcaaggtcaaaccgttaaaagacatcacgatggttcgttcTGtgctGgtctcagtgtggggtttgtgattggagtttggatggttcttgcgtcacttttgttcaagaagagttggaggttttcttactttcaccactttgataggcagtatgacagattgaatcagtggccaaaagatgaatga
More
|
||||||||||
| Protein seq | MINEPENLETWFLFGVALENGFGAFDVFGLFHYSISFVLQGQQLEYSKGLVYLVGLDFSSNKLSGHIPKGIGSLVELVNLNLSWNQLAGNIPDQIGELHQLTSLDLSYNQFSGEIPSSLSNLTFLSYLNLSYNNLSGRIPRGHQLDTLNADDPSLMYIGNPGLCGYPLAKNCPENGTSQGQTVKRHHDGSFCAGLSVGFVIGVWMVLASLLFKKSWRFSYFHHFDRQYDRLNQWPKDE |
||||||||||
| Function | Receptor-like protein EIX2 [UniProtKB/Swiss-Prot:Q6JN46] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_01g0023430 | OsNaBo_01g0023430.01 | Chr01 | 24293424 | 24294605 | + | NAM | ||
| CDS seq | atgatcaacgaaccagaaaatttagaaacatggttcctatttggagtggcactggaaaacggattcggagctttcgatgtattcggcctgttccattatagcatatcatttgttctgcaaggtcaacaacttgaatacagcaagggacttgtgtacttggtgggccttgatttttctagcaacaaattgtctggccatattccaaaggggattggttctcttgtcgaattggtaaatttgaatctgtcctggaaccagttagcaggaaacattccggatcagattggtgagctgcaccaattaacctcccttgacctatcatataatcaattttctggagaaatcccttcaagcctatcaaatttgacattcttgagctatctgaacttgtcttacaacaatttatcgggaaggattcctcggggacatcaactggacacactcaatgcagatgatccatctttgatgtacatcggcaacccaggtctttgtggttatccccttgcaaagaattgtcctgaaaatgggacatctcaaggtcaaaccgttaaaagacatcacgatggttcgttcTGtgctGgtctcagtgtggggtttgtgattggagtttggatggttcttgcgtcacttttgttcaagaagagttggaggttttcttactttcaccactttgataggcagtatgacagattgaatcagtggccaaaagatgaatga
More
|
|||||||
| Protein seq | MINEPENLETWFLFGVALENGFGAFDVFGLFHYSISFVLQGQQLEYSKGLVYLVGLDFSSNKLSGHIPKGIGSLVELVNLNLSWNQLAGNIPDQIGELHQLTSLDLSYNQFSGEIPSSLSNLTFLSYLNLSYNNLSGRIPRGHQLDTLNADDPSLMYIGNPGLCGYPLAKNCPENGTSQGQTVKRHHDGSFCAGLSVGFVIGVWMVLASLLFKKSWRFSYFHHFDRQYDRLNQWPKDE
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.000000 | 0.0 | 0.000000 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0601700 | SBH | 0.294044 | 0.0 | 1.347924 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g41780 | SBH | 0.188767 | 0.0 | 0.329391 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0601700 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0024300 | RBH | 0.097523 | 0.0 | 0.252339 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0024020 | RBH | 0.130820 | 0.000000 | 0.097566 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0024340 | RBH | 0.000000 | 0.000000 | 0.391598 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0023540 | RBH | 0.025093 | 0.039633 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0023440 | RBH | 2.775532 | 0.472948 | 3.969628 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0398000 | SBH | 0.191121 | 1.761456 | 1.7623355 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0023240 | RBH | 0.015733 | 0.067010 | 0.040080 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0386600 | RBH | 0.194691 | 1.8841515 | 2.7185955 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0023380 | RBH | 0.048732 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0023220 | RBH | 0.000000 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0023590 | RBH | 0.000000 | 1.506554 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0023610 | RBH | 0.082126 | 0.215587 | 0.227766 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0023370 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G023710 | SBH | 0.588999 | 0.462985 | 2.210793 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0023480 | RBH | 1.429115 | 7.747613 | 3.695812 |
