Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_01G0398000 | OGI:01013090 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr01:25597293-25598939 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ATGTCTTTTAATCCTTTGAAGGTAGTCCTAGACGAAAGTTGGAGCCCTCCTGCTGAATTGTCCGAAGTTTATTTTGCATCTTGCCAACTGGGTCCAGAATTTCCTGTGTGGATCAAATCGTTGAATAATTGTTACTCAATTGATGTTTCAAGTTCAGGCATAAAAGATGAGCTTCCTAATTGGTTCTGGAATTTAGTTTCTGATGTTGCAAACGTAAATATATCTCATAATCAGATCAGAGGGAAGTTACCAGACAGTTTTCAAGGTATGTCAACTGAAATGCTCATTCTAGCTTCGAACCAGCTGACTGGTCGCCTGCCATCGTTACCGGAAAATCTCTATTATTTGGACATTTCCAGAAACTTATTGTCTGGTCCGCTGCCATTTAATTTTGGTGGCGCAAATCTTGATACACTCATTCTCTTTTCCAACCATATCAATGGCAGCATTCCACAGTCCCTTTGCAAGATGCACAAATTGCGTGCCTTGGATTTAGCAGACAATTTTCTGGTAGGAGAACTTCCTCACTGTTTGCCGACAGAACTGAAACCATCGACTGGTGGTAGTTTTATACATTCCACAAGTCTGAACATTCATATCCTTTTACTAAGCAAAAATCAGCTTTCTGGAGAGTTCCCTATGCTACTGCAATCGTGCCAAAGCATCACCATTCTTGATCTAGCATGGAACAAATATTCTGGAAAGTTGCCAGAGTGGATAGGTGAAAAGTTGCCATCCATAGTAATTCTGCGTATCAGGTCTAATAAGTTCTCTGGTCATATCCCAGGTGGTTTTACCAAACTTGATCATCTGCGGTATTTGGATATAGCTAATAATAGTTTTTCTGGTACTATCCCACAATCCCTTCCGTGCTTGAAAGGAATGATCAACGAACCAGAAAATTTAGAAACATTGTTCCTATTTGGAGTGGCACTGGAAAACGGATTCGGAGCTTTCGATGTATTCGGCCTGTTCCATTATAGCATATCATTTGTTCTGCAAGGTCAACAACTTGAATACAGCAAGGGACTTGTGTACTTGGTGGGCCTTGATTTTTCTAGCAACAAATTGTCTGGCCATATTCCAAAGGAGATTGGTTCTCTTGTCGAATTGGTAAATTTGAATCTGTCCTGGAACCAGTTAGCAGGAAACATTCCGGATCAGATTGGTGAGCTGCACCAATTAACCTCCCTTGACCTATCATATAATCAATTTTCTGGAGAAATCCCTTCAAGCCTATCAAATTTGACATTCTTGAGCTATCTGAACTTGTCTTACAACAATTTATCGGGAAGGATTCCTCGGGGACATCAACTGGACACACTCAATGCAGATGATCCATCTTTGATGTACATCGGCAACCCAGGTCTTTGTGGTTATCCCCTTGCAAAGAATTGTCCTGAAAATGGGACATCTCAAGGTCAAACCGTTAAAAGTCATCACGATGGTTCGTTCTGTGCTGGTCTCAGTGTGGGGTTTGTGATTGGAGTTTGGATGGTTCTTGCGTCACTTTTGTTCAAGAAGAGTTGGAGGTTTTCTTACTTTCACCACTTTGATAGGCAGTATGACAGATTGAATGTGTTTCTTACTGTCACTTCAGCGATATACCTCCAAAAGGCTACACGATTTAAGGATAGAAGAAGCTGA
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| CDS seq | ATGTCTTTTAATCCTTTGAAGGTAGTCCTAGACGAAAGTTGGAGCCCTCCTGCTGAATTGTCCGAAGTTTATTTTGCATCTTGCCAACTGGGTCCAGAATTTCCTGTGTGGATCAAATCGTTGAATAATTGTTACTCAATTGATGTTTCAAGTTCAGGCATAAAAGATGAGCTTCCTAATTGGTTCTGGAATTTAGTTTCTGATGTTGCAAACGTAAATATATCTCATAATCAGATCAGAGGGAAGTTACCAGACAGTTTTCAAGGTATGTCAACTGAAATGCTCATTCTAGCTTCGAACCAGCTGACTGGTCGCCTGCCATCGTTACCGGAAAATCTCTATTATTTGGACATTTCCAGAAACTTATTGTCTGGTCCGCTGCCATTTAATTTTGGTGGCGCAAATCTTGATACACTCATTCTCTTTTCCAACCATATCAATGGCAGCATTCCACAGTCCCTTTGCAAGATGCACAAATTGCGTGCCTTGGATTTAGCAGACAATTTTCTGGTAGGAGAACTTCCTCACTGTTTGCCGACAGAACTGAAACCATCGACTGGTGGTAGTTTTATACATTCCACAAGTCTGAACATTCATATCCTTTTACTAAGCAAAAATCAGCTTTCTGGAGAGTTCCCTATGCTACTGCAATCGTGCCAAAGCATCACCATTCTTGATCTAGCATGGAACAAATATTCTGGAAAGTTGCCAGAGTGGATAGGTGAAAAGTTGCCATCCATAGTAATTCTGCGTATCAGGTCTAATAAGTTCTCTGGTCATATCCCAGGTGGTTTTACCAAACTTGATCATCTGCGGTATTTGGATATAGCTAATAATAGTTTTTCTGGTACTATCCCACAATCCCTTCCGTGCTTGAAAGGAATGATCAACGAACCAGAAAATTTAGAAACATTGTTCCTATTTGGAGTGGCACTGGAAAACGGATTCGGAGCTTTCGATGTATTCGGCCTGTTCCATTATAGCATATCATTTGTTCTGCAAGGTCAACAACTTGAATACAGCAAGGGACTTGTGTACTTGGTGGGCCTTGATTTTTCTAGCAACAAATTGTCTGGCCATATTCCAAAGGAGATTGGTTCTCTTGTCGAATTGGTAAATTTGAATCTGTCCTGGAACCAGTTAGCAGGAAACATTCCGGATCAGATTGGTGAGCTGCACCAATTAACCTCCCTTGACCTATCATATAATCAATTTTCTGGAGAAATCCCTTCAAGCCTATCAAATTTGACATTCTTGAGCTATCTGAACTTGTCTTACAACAATTTATCGGGAAGGATTCCTCGGGGACATCAACTGGACACACTCAATGCAGATGATCCATCTTTGATGTACATCGGCAACCCAGGTCTTTGTGGTTATCCCCTTGCAAAGAATTGTCCTGAAAATGGGACATCTCAAGGTCAAACCGTTAAAAGTCATCACGATGGTTCGTTCTGTGCTGGTCTCAGTGTGGGGTTTGTGATTGGAGTTTGGATGGTTCTTGCGTCACTTTTGTTCAAGAAGAGTTGGAGGTTTTCTTACTTTCACCACTTTGATAGGCAGTATGACAGATTGAATGTGTTTCTTACTGTCACTTCAGCGATATACCTCCAAAAGGCTACACGATTTAAGGATAGAAGAAGCTGA
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| Protein seq | MSFNPLKVVLDESWSPPAELSEVYFASCQLGPEFPVWIKSLNNCYSIDVSSSGIKDELPNWFWNLVSDVANVNISHNQIRGKLPDSFQGMSTEMLILASNQLTGRLPSLPENLYYLDISRNLLSGPLPFNFGGANLDTLILFSNHINGSIPQSLCKMHKLRALDLADNFLVGELPHCLPTELKPSTGGSFIHSTSLNIHILLLSKNQLSGEFPMLLQSCQSITILDLAWNKYSGKLPEWIGEKLPSIVILRIRSNKFSGHIPGGFTKLDHLRYLDIANNSFSGTIPQSLPCLKGMINEPENLETLFLFGVALENGFGAFDVFGLFHYSISFVLQGQQLEYSKGLVYLVGLDFSSNKLSGHIPKEIGSLVELVNLNLSWNQLAGNIPDQIGELHQLTSLDLSYNQFSGEIPSSLSNLTFLSYLNLSYNNLSGRIPRGHQLDTLNADDPSLMYIGNPGLCGYPLAKNCPENGTSQGQTVKSHHDGSFCAGLSVGFVIGVWMVLASLLFKKSWRFSYFHHFDRQYDRLNVFLTVTSAIYLQKATRFKDRRS |
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| Function | Receptor-like protein EIX2 [UniProtKB/Swiss-Prot:Q6JN46] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_01G0398000 | OsMH63_01T0398000.1 | Chr01 | 25597293 | 25598939 | + | maker | ||
| CDS seq | ATGTCTTTTAATCCTTTGAAGGTAGTCCTAGACGAAAGTTGGAGCCCTCCTGCTGAATTGTCCGAAGTTTATTTTGCATCTTGCCAACTGGGTCCAGAATTTCCTGTGTGGATCAAATCGTTGAATAATTGTTACTCAATTGATGTTTCAAGTTCAGGCATAAAAGATGAGCTTCCTAATTGGTTCTGGAATTTAGTTTCTGATGTTGCAAACGTAAATATATCTCATAATCAGATCAGAGGGAAGTTACCAGACAGTTTTCAAGGTATGTCAACTGAAATGCTCATTCTAGCTTCGAACCAGCTGACTGGTCGCCTGCCATCGTTACCGGAAAATCTCTATTATTTGGACATTTCCAGAAACTTATTGTCTGGTCCGCTGCCATTTAATTTTGGTGGCGCAAATCTTGATACACTCATTCTCTTTTCCAACCATATCAATGGCAGCATTCCACAGTCCCTTTGCAAGATGCACAAATTGCGTGCCTTGGATTTAGCAGACAATTTTCTGGTAGGAGAACTTCCTCACTGTTTGCCGACAGAACTGAAACCATCGACTGGTGGTAGTTTTATACATTCCACAAGTCTGAACATTCATATCCTTTTACTAAGCAAAAATCAGCTTTCTGGAGAGTTCCCTATGCTACTGCAATCGTGCCAAAGCATCACCATTCTTGATCTAGCATGGAACAAATATTCTGGAAAGTTGCCAGAGTGGATAGGTGAAAAGTTGCCATCCATAGTAATTCTGCGTATCAGGTCTAATAAGTTCTCTGGTCATATCCCAGGTGGTTTTACCAAACTTGATCATCTGCGGTATTTGGATATAGCTAATAATAGTTTTTCTGGTACTATCCCACAATCCCTTCCGTGCTTGAAAGGAATGATCAACGAACCAGAAAATTTAGAAACATTGTTCCTATTTGGAGTGGCACTGGAAAACGGATTCGGAGCTTTCGATGTATTCGGCCTGTTCCATTATAGCATATCATTTGTTCTGCAAGGTCAACAACTTGAATACAGCAAGGGACTTGTGTACTTGGTGGGCCTTGATTTTTCTAGCAACAAATTGTCTGGCCATATTCCAAAGGAGATTGGTTCTCTTGTCGAATTGGTAAATTTGAATCTGTCCTGGAACCAGTTAGCAGGAAACATTCCGGATCAGATTGGTGAGCTGCACCAATTAACCTCCCTTGACCTATCATATAATCAATTTTCTGGAGAAATCCCTTCAAGCCTATCAAATTTGACATTCTTGAGCTATCTGAACTTGTCTTACAACAATTTATCGGGAAGGATTCCTCGGGGACATCAACTGGACACACTCAATGCAGATGATCCATCTTTGATGTACATCGGCAACCCAGGTCTTTGTGGTTATCCCCTTGCAAAGAATTGTCCTGAAAATGGGACATCTCAAGGTCAAACCGTTAAAAGTCATCACGATGGTTCGTTCTGTGCTGGTCTCAGTGTGGGGTTTGTGATTGGAGTTTGGATGGTTCTTGCGTCACTTTTGTTCAAGAAGAGTTGGAGGTTTTCTTACTTTCACCACTTTGATAGGCAGTATGACAGATTGAATGTGTTTCTTACTGTCACTTCAGCGATATACCTCCAAAAGGCTACACGATTTAAGGATAGAAGAAGCTGA
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| Protein seq | MSFNPLKVVLDESWSPPAELSEVYFASCQLGPEFPVWIKSLNNCYSIDVSSSGIKDELPNWFWNLVSDVANVNISHNQIRGKLPDSFQGMSTEMLILASNQLTGRLPSLPENLYYLDISRNLLSGPLPFNFGGANLDTLILFSNHINGSIPQSLCKMHKLRALDLADNFLVGELPHCLPTELKPSTGGSFIHSTSLNIHILLLSKNQLSGEFPMLLQSCQSITILDLAWNKYSGKLPEWIGEKLPSIVILRIRSNKFSGHIPGGFTKLDHLRYLDIANNSFSGTIPQSLPCLKGMINEPENLETLFLFGVALENGFGAFDVFGLFHYSISFVLQGQQLEYSKGLVYLVGLDFSSNKLSGHIPKEIGSLVELVNLNLSWNQLAGNIPDQIGELHQLTSLDLSYNQFSGEIPSSLSNLTFLSYLNLSYNNLSGRIPRGHQLDTLNADDPSLMYIGNPGLCGYPLAKNCPENGTSQGQTVKSHHDGSFCAGLSVGFVIGVWMVLASLLFKKSWRFSYFHHFDRQYDRLNVFLTVTSAIYLQKATRFKDRRS
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.191121 | 1.761456 | 1.7623355 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0603800 | SBH | 0.640083 | 0.837041 | 0.999380 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g41930 | SBH | 0.330381 | 0.432374 | 0.217218 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0603800 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0024280 | SBH | 0.000000 | 0.0 | 0.000000 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0023880 | SBH | 0.013616 | 0.000000 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0024340 | RBH | 0.000000 | 0.000000 | 0.391598 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0023690 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0023440 | RBH | 2.775532 | 0.472948 | 3.969628 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0397500 | RBH | 0.3554735 | 2.771577 | 2.6430535 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0023220 | SBH | 0.079721 | 0.000000 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0386600 | SBH | 0.194691 | 1.8841515 | 2.7185955 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0023380 | RBH | 0.048732 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0023340 | SBH | 0.000000 | 0.000000 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0023590 | SBH | 0.000000 | 1.506554 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0023610 | RBH | 0.082126 | 0.215587 | 0.227766 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0023370 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G023710 | RBH | 0.588999 | 0.462985 | 2.210793 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0023430 | SBH | 0.000000 | 0.0 | 0.000000 |
