Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsKeNa_11g0022010 | OGI:11077650 | 16/16 | KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | Chr11:26900714-26908529 | ||||||||
| Gene Symbol | YR2, YR6, YR9, YR10, YR21, YR23, DRP-RP13, OsDRP-RP13 | ||||||||||
| DNA seq | agatgtagatttggtattcattcattttcaacgctcccctcctcctctcctcctttcccacgcgagatgcagatcgggctggcggcgcgttcgtaggcggcggcgattcggtgcaccggcgagctagccacgaccattgcctcctcctctctacactccatccaagcaccggcgcgcgcacctctccccctccatccaagcagtagcctgcctagccgtgcctgtttcctttctcatcggcagtagggtgcgaaggcgcggcggcgaccagcagcccagctgcgccctattcccctctctcgtcggttgctgctctgccccgcgttgtccctcctcctctgcactcggatctgcacacttttgttccttctccaaggtatgcaaaccctagcattggatatgatcttgcttgtcaatttgtgatgtgaacaagcagccattgtgatgcaaacaaaaaaaattcattaaactgtaagatacaaaaaaaaaaggggcgcatccatgacatgggagcatatttatttttgtttgattgtcctcttgtacatggagaaagaggaccaaacttggaatatataaaaatggttcatctatatcttggaatatataaaaatgaaattaagctgctaagtgactttcagttggttaacttacagtctaataaaatgatagaggccatgtatagaatgtggtaatatgtccgtctatgccaatgtatctcagtagcgtgcctgtacctttaggcactaggcagtaatcacacactgacaactcttccctctattgttgtctgatgtgtgaaacacaacaaatctatacacgtagtagtgtgtgtttcataatatatacacatagtagtgtgtagcaatgttaacatgataaatttaaattagtcttacaaaatacttgctagttattattactattattatttatactagagaattgcaatattctatacacaaaacgctgggttgtggagcatagagaagtgggcaatacttaaaattgtatcagagttagtaccatgggaaacagatccagaaattgtctagtctgaatgttcagctgtgcaatatgtacaaggctctaccacctctcctaaaccactccttcattgttgctttgttccaccgtgggataacattctcatattgcatttctaccagttgtgggtaagcccaagacatatagctgaacttgtttcctttatctcccttatgctaatctgcaaatgctcattttggctgtaggtacgtagtttcttaagtatcagttgcatccgtttttatgtgccctctgtttgattgagatgagatttattaggaaggaaatgcctgcttcatctgagtaaactcctacatactgctctccttgcagcactcctttatcggtactatcccattgattcttctagttaattaacattctgaatcattctagttctacatttatataatgagcatacactgaacttcatttattttgacccttttttgcagttgtaacagtgcagactgcagttctctcgtcatggctggctcataatgtactgaaatctattctatatattggcttatccaatcagttgcatttggtatccactaagctcaatgtatcgagcctttaagtagattggtcggattgagcaaactgctatcttgtgcgagatgattgctactataccttactgctagctctgtaaggtaagatttgcatcctcacagaatttttttttccatgtctaatattcaaatctagcatgcatgttcctgtgatcattgtatgggatacaactggtaggtggggaggtgttttcgtgatgttaattgccagaatttttaaactgaatttgttaacacaaattttggaatcattggcagactacatttttgacattcatctgttattttttgtggaataaccttttgagttcctcatatggcaacaatagtaaatactttaggtggatcatatgtcaataagttgcaagcaagacacaagtggcccttgacccttctcccttgttgaaattaatgttggctgtgttcctatagtgccacctatgtagttgggtagggagcctgcaaaatcattgggtaagctcaagatatatatagctaaacttgtttcccttttttttctttaagttaatctacaaatgttcatcttgatcacacgcatatgaagtttaaggatgactggatcagttggacctatttctgtttgtcatctgaatgaccgatgagatcctcaagggaggaaaaacccttcatctaagtaaatctgtctatactgctcgcctttcagcacactcttaactggttgatgtcgacagttgcattctctattgccattgattcttctagcagttacattgtaaatcttctagctctatacttctatatctatataatgcgcacacacttcacatcttcttttcttctgtcccattgtttcgcagttttagcagcatggtctctggtatcttgatgactggctcaaatgttgtaatatctatcaattgattttggtctccactctccattaatatgatccagtctgtcaagatcttaggcagatgggttggtcatcacctcatcggagcaaactgcttctgcaagttgacttctactataatattgatccttgtgatgtaccataatgttcttttcagctgaatgatcactctgtaaggtaagatttgcaagtagttgatatttggtacgagtagcttctattcacgatcttttttggtaatatagttagtaggaggggaggggtttccattattttaactactacaatggaagtgttatcacaacttctaggctagcatgtcaattttgccagccactggtctcctcacttgcatctgggactagacacacacattcacactcacactcactctaccaaaatcaaaagggaaggcatcttaagtgagtagttgatgctcaatatcgcaacatgcaaggtatgctgaagtttagtgttagctcctaatgaaactttctagatgcaagagctatggcatagtttcggtatgcaaaatataaatggatatatatttactaatcttcatatgggatacatatggtatacttcctccgtttcacaatgtaagtcattctagcatttcccgcattcatattgatgttaatgaatctagatagatatatatgtctagattcattaacatcaaaatgaatgtggaaaatgctagaatgacttacattgtgaaacggagggagtaatatttagtgaactttatctaatttttaaactatgttaatacaagttttggaattatttccaggttacagtttttacagtcatatggtatttttggagtacgacttttgaatttgatgaatggcaacaatactagtcacttttattagatcatgcatccaaaagttgaatgggattattacagatgaggcaatactcattttaggggtaaaagatgaacttcaggaactgcagcatctaataagtatgataggtcattttgtttctgatgctgaggcaaggaggatagaagattcagcagttgaaaaatggcttgacctgataaaagatgttatttatgatattgatgatattattgatttggctaggtttaaagcaagtgtgctactacctgaccatcgtatgtcatcaaggagatcaactgcttgcagtggtctttcactttcctatcgcttttctaaaagttggatgcatcatgaggtttctgtaaaaattagaagcctcaacaaaaggatacagaacatttcaaaggatatggtatttttaaaactcaattatacacaacctattggaggtggttcagcatggacaccgataaaaagtactagcctggttgaacccttacttgtcggcaaggagatcatacatgcttgtagagaagtggtgaatttggtgcttgaaaataaggaaaggatggagattaaggtttacaagattgctattctaggaacaggaggagttggcaagacaacactagctcaaaaaatattcaatgatataaaaataaaaggaagattcgacaagcatgcctggatttctgtttctatggagtattctattgtttctcttttaaaagaagttctttgtcatatggatattccatatgagaaagacgaatctattggagagctccaacacaggctcgaatcaggcattagaaataagagttttttccttgtgatggatgatgtgtggcagtctgaaacatggacaaatttactaagaaatccactgcatgctgcgtctacaggaacaattctagtaactactcgacttgacactattgctctagcaattggggtgcaccacactcatagagttgatttgatgtcagacagtgtaggatgggaactactttggaagagcatgaacatcaatgaagagaaacaagtacaaaatttacgtgacattggtattgagattgttcacaaatgcggtggccttcctcttgcaatcaaggttatttccagcgttttggcaacccgagatcaaacaaaggatgcatggctacgaattttagagaaaaatgcttggtccatgagccaacttcctcatccaattagaggtgctttatatctaagttatgatgcgctaccagaccagctgaagcaatgctttctttattgtgcaatgtatcctgaagatgcaatcatatgccgtgatgatcttgtcagaatgtgggtagctgaaggctttatagatcagcatgaagggcaactactagaagacacagcagaggaatactattatgagctgatccaacggaacttgctccaacctcatggctattatttagacaacagcaaatgcatcttgcatgatctcttaaggcaacttgcttgttatttatcaagagaagaatgttttgttggagacccagattccctagagagtaataatatgtgcaaattacgacgtatttcaattatcactgagaaggacatggtagttatacctagcatgaataaggatcaatataatgtgaggactcttgtaacatttcatgggaagtcacaaagaatcgataattcacttttcaagagacttgcatatcttcatgttttggacctgactggcttacttgtagaaagcattcaaagccatattggaaatctgattcatctgcgtttgattgatcttagtgggacatgcatatctcatctcccagagtccattggtaaccttcaaaatcttcagatattgagcctgcaggggtgtaaaaatttgcacatgctaccttccgcaatcactcagttgttcaatttgaggcggcttggtctcggtgaaacaccgataaatcaggtttcgaaagggataggaagactaaaattcctgaatgatttaggaggatttcctattggtggtggaagtgacagtactaaaatgcaagatggatggaatttagaagagttggctcatcttttacagttgaggcggcttgatatggtaaaattggaaaaaggtactccttgtagcagcagaaactcattattgctaactgacaaaaagcatctcaaatttctacacctgggctgcactaaacctatagataaagcatattcagtggaacaagttagcaacattaagaagatttttgaacaactaaagcctccatgcaacttagaaaatctagttattacaagattctttggtcagatgttccccacctggcttggtactactcatttgtattcagtgaaatgcttgaaacttataaattgcaaaacctgcacgcatcttccgccaattgggcagctacccaacttgaaatacctgaaaattttgggagcaaccgcaattactaagatcggtcctgagtttgtaggtccctggatgggcaatattagatctatagagggagttgcttttccgaagctcaaaatgttgatcatcattgatatgcccaactgggaggagtggtcctttgttgaaaaagaagaggaggaagttgctgcaacagttaaggaagggggagaggatggagctgctgcaaagcactctgccccatctccaaggtcattacttctgcttccctgtttgaagaatttggaacttgtgggttgccccaagctcagagctctcccgcgacagctcggacagcaggccatcagcttgaaggacctccatataagaggggcaagaagcttgaagacagtagaggacctcccgttcctctctgatcgtctttcagttggtggatgtgatggcctggagagggtttccaaccttcccaaagcaagagcattgtatgtaagtgtttgtccaagtttgagttgtgttaaggagttgagaaatttgaagcaggtatgtctgggcgtggatatgcaagggattgcatctcggtgggtgcctggacttcaagagcaacgtttccagctccatggagatgacctggaggtttgcccatggtcggagctggatgaacccacgtggcctagaatctgaaggtcaacacccaactggaaggcattaatggagacataaggtagtaatgacactagctttgcattttagtgcgttccaaaagttctatttgattccaaatttgcaaccttcaggcccaatcgtgtgatgatgttatctgtataatgtattctacattacattcattattgtttcttaaaactatcagctctagccaatggagtttttataaagtctagcagtgactagcttaacaccatagttaatacatgtggatcatcataaaaacagttgccaaacttatatccctctttatgatcagagcaattatacctatatagtcaaccatgtccaccttagatgtttaaatccctgtcctagctgtaccgtacatgacaactactaagattgttcttaaaaaaatgtgcttccccgcagagagaaatatgacaccatttataccgtcaaatgtttggtacgatcatactgttagtcagcatgaacatgccaatagatgcatgatttttgtagggacgagacattatgatcttttttttggagcaaatcagtaaatagtgctgggtatctagctagagttttagtccaattccagcttacacattcaataaaatttttgttgcacatgatttatgtcaatatatccaatcaggcatgcatataggagattctgatgttaggatgtgccagttttcaataggtcacgggtcatctaaggttgttgggcaaacaaaaccacattaatccttctgtattcgttcagattaatgtgtattttagttcatatccccactaatatatatccaaataagctgagaataccactaataacatatactacttagactatgcagttcatgtgtggctttttctctaatctatgtttggtaggtttaatcagaaaatatcaggctcaaaactgatgattctcgtatttgcttttccttcaattaagctcttaaatttgaaaaaaaatgcttacatacatagccatgcttaatctatgtggcttgtttattttgtaggatgctcatcttcaagacttgcgcgagtcactcttatctgttactagtatcttttctttcaactagttactggtcatggaagatacaaaattcaaaaaaagaaaaagaaaaaagagagtcaaaacccaaaaaaaagaggaaaaaggtcaacaaaaaattatcattcctttatctagtgtacaatatattttcatgggtttgtgatgaactgtgtatgttttggtttcccttttgcaccttgatgtttcttctttttattacttcctctgtccacatactaaataatgctttctagatatgacaattggtccaca
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| CDS seq | atggcaacaatactagtcacttttattagatcatgcatccaaaagttgaatgggattattacagatgaggcaatactcattttaggggtaaaagatgaacttcaggaactgcagcatctaataagtatgataggtcattttgtttctgatgctgaggcaaggaggatagaagattcagcagttgaaaaatggcttgacctgataaaagatgttatttatgatattgatgatattattgatttggctaggtttaaagcaagtgtgctactacctgaccatcgtatgtcatcaaggagatcaactgcttgcagtggtctttcactttcctatcgcttttctaaaagttggatgcatcatgaggtttctgtaaaaattagaagcctcaacaaaaggatacagaacatttcaaaggatatggtatttttaaaactcaattatacacaacctattggaggtggttcagcatggacaccgataaaaagtactagcctggttgaacccttacttgtcggcaaggagatcatacatgcttgtagagaagtggtgaatttggtgcttgaaaataaggaaaggatggagattaaggtttacaagattgctattctaggaacaggaggagttggcaagacaacactagctcaaaaaatattcaatgatataaaaataaaaggaagattcgacaagcatgcctggatttctgtttctatggagtattctattgtttctcttttaaaagaagttctttgtcatatggatattccatatgagaaagacgaatctattggagagctccaacacaggctcgaatcaggcattagaaataagagttttttccttgtgatggatgatgtgtggcagtctgaaacatggacaaatttactaagaaatccactgcatgctgcgtctacaggaacaattctagtaactactcgacttgacactattgctctagcaattggggtgcaccacactcatagagttgatttgatgtcagacagtgtaggatgggaactactttggaagagcatgaacatcaatgaagagaaacaagtacaaaatttacgtgacattggtattgagattgttcacaaatgcggtggccttcctcttgcaatcaaggttatttccagcgttttggcaacccgagatcaaacaaaggatgcatggctacgaattttagagaaaaatgcttggtccatgagccaacttcctcatccaattagaggtgctttatatctaagttatgatgcgctaccagaccagctgaagcaatgctttctttattgtgcaatgtatcctgaagatgcaatcatatgccgtgatgatcttgtcagaatgtgggtagctgaaggctttatagatcagcatgaagggcaactactagaagacacagcagaggaatactattatgagctgatccaacggaacttgctccaacctcatggctattatttagacaacagcaaatgcatcttgcatgatctcttaaggcaacttgcttgttatttatcaagagaagaatgttttgttggagacccagattccctagagagtaataatatgtgcaaattacgacgtatttcaattatcactgagaaggacatggtagttatacctagcatgaataaggatcaatataatgtgaggactcttgtaacatttcatgggaagtcacaaagaatcgataattcacttttcaagagacttgcatatcttcatgttttggacctgactggcttacttgtagaaagcattcaaagccatattggaaatctgattcatctgcgtttgattgatcttagtgggacatgcatatctcatctcccagagtccattggtaaccttcaaaatcttcagatattgagcctgcaggggtgtaaaaatttgcacatgctaccttccgcaatcactcagttgttcaatttgaggcggcttggtctcggtgaaacaccgataaatcaggtttcgaaagggataggaagactaaaattcctgaatgatttaggaggatttcctattggtggtggaagtgacagtactaaaatgcaagatggatggaatttagaagagttggctcatcttttacagttgaggcggcttgatatggtaaaattggaaaaaggtactccttgtagcagcagaaactcattattgctaactgacaaaaagcatctcaaatttctacacctgggctgcactaaacctatagataaagcatattcagtggaacaagttagcaacattaagaagatttttgaacaactaaagcctccatgcaacttagaaaatctagttattacaagattctttggtcagatgttccccacctggcttggtactactcatttgtattcagtgaaatgcttgaaacttataaattgcaaaacctgcacgcatcttccgccaattgggcagctacccaacttgaaatacctgaaaattttgggagcaaccgcaattactaagatcggtcctgagtttgtaggtccctggatgggcaatattagatctatagagggagttgcttttccgaagctcaaaatgttgatcatcattgatatgcccaactgggaggagtggtcctttgttgaaaaagaagaggaggaagttgctgcaacagttaaggaagggggagaggatggagctgctgcaaagcactctgccccatctccaaggtcattacttctgcttccctgtttgaagaatttggaacttgtgggttgccccaagctcagagctctcccgcgacagctcggacagcaggccatcagcttgaaggacctccatataagaggggcaagaagcttgaagacagtagaggacctcccgttcctctctgatcgtctttcagttggtggatgtgatggcctggagagggtttccaaccttcccaaagcaagagcattgtatgtaagtgtttgtccaagtttgagttgtgttaaggagttgagaaatttgaagcaggtatgtctgggcgtggatatgcaagggattgcatctcggtgggtgcctggacttcaagagcaacgtttccagctccatggagatgacctggaggtttgcccatggtcggagctggatgaacccacgtggcctagaatctga
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| Protein seq | MATILVTFIRSCIQKLNGIITDEAILILGVKDELQELQHLISMIGHFVSDAEARRIEDSAVEKWLDLIKDVIYDIDDIIDLARFKASVLLPDHRMSSRRSTACSGLSLSYRFSKSWMHHEVSVKIRSLNKRIQNISKDMVFLKLNYTQPIGGGSAWTPIKSTSLVEPLLVGKEIIHACREVVNLVLENKERMEIKVYKIAILGTGGVGKTTLAQKIFNDIKIKGRFDKHAWISVSMEYSIVSLLKEVLCHMDIPYEKDESIGELQHRLESGIRNKSFFLVMDDVWQSETWTNLLRNPLHAASTGTILVTTRLDTIALAIGVHHTHRVDLMSDSVGWELLWKSMNINEEKQVQNLRDIGIEIVHKCGGLPLAIKVISSVLATRDQTKDAWLRILEKNAWSMSQLPHPIRGALYLSYDALPDQLKQCFLYCAMYPEDAIICRDDLVRMWVAEGFIDQHEGQLLEDTAEEYYYELIQRNLLQPHGYYLDNSKCILHDLLRQLACYLSREECFVGDPDSLESNNMCKLRRISIITEKDMVVIPSMNKDQYNVRTLVTFHGKSQRIDNSLFKRLAYLHVLDLTGLLVESIQSHIGNLIHLRLIDLSGTCISHLPESIGNLQNLQILSLQGCKNLHMLPSAITQLFNLRRLGLGETPINQVSKGIGRLKFLNDLGGFPIGGGSDSTKMQDGWNLEELAHLLQLRRLDMVKLEKGTPCSSRNSLLLTDKKHLKFLHLGCTKPIDKAYSVEQVSNIKKIFEQLKPPCNLENLVITRFFGQMFPTWLGTTHLYSVKCLKLINCKTCTHLPPIGQLPNLKYLKILGATAITKIGPEFVGPWMGNIRSIEGVAFPKLKMLIIIDMPNWEEWSFVEKEEEEVAATVKEGGEDGAAAKHSAPSPRSLLLLPCLKNLELVGCPKLRALPRQLGQQAISLKDLHIRGARSLKTVEDLPFLSDRLSVGGCDGLERVSNLPKARALYVSVCPSLSCVKELRNLKQVCLGVDMQGIASRWVPGLQEQRFQLHGDDLEVCPWSELDEPTWPRI |
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| Function | Putative disease resistance protein RGA3 [UniProtKB/Swiss-Prot:Q7XA40] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_11g0022010 | OsKeNa_11g0022010.01 | Chr11 | 26904089 | 26907193 | + | NAM | ||
| CDS seq | atggcaacaatactagtcacttttattagatcatgcatccaaaagttgaatgggattattacagatgaggcaatactcattttaggggtaaaagatgaacttcaggaactgcagcatctaataagtatgataggtcattttgtttctgatgctgaggcaaggaggatagaagattcagcagttgaaaaatggcttgacctgataaaagatgttatttatgatattgatgatattattgatttggctaggtttaaagcaagtgtgctactacctgaccatcgtatgtcatcaaggagatcaactgcttgcagtggtctttcactttcctatcgcttttctaaaagttggatgcatcatgaggtttctgtaaaaattagaagcctcaacaaaaggatacagaacatttcaaaggatatggtatttttaaaactcaattatacacaacctattggaggtggttcagcatggacaccgataaaaagtactagcctggttgaacccttacttgtcggcaaggagatcatacatgcttgtagagaagtggtgaatttggtgcttgaaaataaggaaaggatggagattaaggtttacaagattgctattctaggaacaggaggagttggcaagacaacactagctcaaaaaatattcaatgatataaaaataaaaggaagattcgacaagcatgcctggatttctgtttctatggagtattctattgtttctcttttaaaagaagttctttgtcatatggatattccatatgagaaagacgaatctattggagagctccaacacaggctcgaatcaggcattagaaataagagttttttccttgtgatggatgatgtgtggcagtctgaaacatggacaaatttactaagaaatccactgcatgctgcgtctacaggaacaattctagtaactactcgacttgacactattgctctagcaattggggtgcaccacactcatagagttgatttgatgtcagacagtgtaggatgggaactactttggaagagcatgaacatcaatgaagagaaacaagtacaaaatttacgtgacattggtattgagattgttcacaaatgcggtggccttcctcttgcaatcaaggttatttccagcgttttggcaacccgagatcaaacaaaggatgcatggctacgaattttagagaaaaatgcttggtccatgagccaacttcctcatccaattagaggtgctttatatctaagttatgatgcgctaccagaccagctgaagcaatgctttctttattgtgcaatgtatcctgaagatgcaatcatatgccgtgatgatcttgtcagaatgtgggtagctgaaggctttatagatcagcatgaagggcaactactagaagacacagcagaggaatactattatgagctgatccaacggaacttgctccaacctcatggctattatttagacaacagcaaatgcatcttgcatgatctcttaaggcaacttgcttgttatttatcaagagaagaatgttttgttggagacccagattccctagagagtaataatatgtgcaaattacgacgtatttcaattatcactgagaaggacatggtagttatacctagcatgaataaggatcaatataatgtgaggactcttgtaacatttcatgggaagtcacaaagaatcgataattcacttttcaagagacttgcatatcttcatgttttggacctgactggcttacttgtagaaagcattcaaagccatattggaaatctgattcatctgcgtttgattgatcttagtgggacatgcatatctcatctcccagagtccattggtaaccttcaaaatcttcagatattgagcctgcaggggtgtaaaaatttgcacatgctaccttccgcaatcactcagttgttcaatttgaggcggcttggtctcggtgaaacaccgataaatcaggtttcgaaagggataggaagactaaaattcctgaatgatttaggaggatttcctattggtggtggaagtgacagtactaaaatgcaagatggatggaatttagaagagttggctcatcttttacagttgaggcggcttgatatggtaaaattggaaaaaggtactccttgtagcagcagaaactcattattgctaactgacaaaaagcatctcaaatttctacacctgggctgcactaaacctatagataaagcatattcagtggaacaagttagcaacattaagaagatttttgaacaactaaagcctccatgcaacttagaaaatctagttattacaagattctttggtcagatgttccccacctggcttggtactactcatttgtattcagtgaaatgcttgaaacttataaattgcaaaacctgcacgcatcttccgccaattgggcagctacccaacttgaaatacctgaaaattttgggagcaaccgcaattactaagatcggtcctgagtttgtaggtccctggatgggcaatattagatctatagagggagttgcttttccgaagctcaaaatgttgatcatcattgatatgcccaactgggaggagtggtcctttgttgaaaaagaagaggaggaagttgctgcaacagttaaggaagggggagaggatggagctgctgcaaagcactctgccccatctccaaggtcattacttctgcttccctgtttgaagaatttggaacttgtgggttgccccaagctcagagctctcccgcgacagctcggacagcaggccatcagcttgaaggacctccatataagaggggcaagaagcttgaagacagtagaggacctcccgttcctctctgatcgtctttcagttggtggatgtgatggcctggagagggtttccaaccttcccaaagcaagagcattgtatgtaagtgtttgtccaagtttgagttgtgttaaggagttgagaaatttgaagcaggtatgtctgggcgtggatatgcaagggattgcatctcggtgggtgcctggacttcaagagcaacgtttccagctccatggagatgacctggaggtttgcccatggtcggagctggatgaacccacgtggcctagaatctga
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| Protein seq | MATILVTFIRSCIQKLNGIITDEAILILGVKDELQELQHLISMIGHFVSDAEARRIEDSAVEKWLDLIKDVIYDIDDIIDLARFKASVLLPDHRMSSRRSTACSGLSLSYRFSKSWMHHEVSVKIRSLNKRIQNISKDMVFLKLNYTQPIGGGSAWTPIKSTSLVEPLLVGKEIIHACREVVNLVLENKERMEIKVYKIAILGTGGVGKTTLAQKIFNDIKIKGRFDKHAWISVSMEYSIVSLLKEVLCHMDIPYEKDESIGELQHRLESGIRNKSFFLVMDDVWQSETWTNLLRNPLHAASTGTILVTTRLDTIALAIGVHHTHRVDLMSDSVGWELLWKSMNINEEKQVQNLRDIGIEIVHKCGGLPLAIKVISSVLATRDQTKDAWLRILEKNAWSMSQLPHPIRGALYLSYDALPDQLKQCFLYCAMYPEDAIICRDDLVRMWVAEGFIDQHEGQLLEDTAEEYYYELIQRNLLQPHGYYLDNSKCILHDLLRQLACYLSREECFVGDPDSLESNNMCKLRRISIITEKDMVVIPSMNKDQYNVRTLVTFHGKSQRIDNSLFKRLAYLHVLDLTGLLVESIQSHIGNLIHLRLIDLSGTCISHLPESIGNLQNLQILSLQGCKNLHMLPSAITQLFNLRRLGLGETPINQVSKGIGRLKFLNDLGGFPIGGGSDSTKMQDGWNLEELAHLLQLRRLDMVKLEKGTPCSSRNSLLLTDKKHLKFLHLGCTKPIDKAYSVEQVSNIKKIFEQLKPPCNLENLVITRFFGQMFPTWLGTTHLYSVKCLKLINCKTCTHLPPIGQLPNLKYLKILGATAITKIGPEFVGPWMGNIRSIEGVAFPKLKMLIIIDMPNWEEWSFVEKEEEEVAATVKEGGEDGAAAKHSAPSPRSLLLLPCLKNLELVGCPKLRALPRQLGQQAISLKDLHIRGARSLKTVEDLPFLSDRLSVGGCDGLERVSNLPKARALYVSVCPSLSCVKELRNLKQVCLGVDMQGIASRWVPGLQEQRFQLHGDDLEVCPWSELDEPTWPRI
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_11g0022010 | OsKeNa_11g0022010.02 | Chr11 | 26900714 | 26908529 | + | IsoSeq | ||
| CDS seq | atgctcatcttcaagacttgcgcgagtcactcttatctgttactagtatcttttctttcaactagttactggtcatggaagatacaaaattcaaaaaaagaaaaagaaaaaagagagtcaaaacccaaaaaaaagaggaaaaaggtcaacaaaaaattatcattcctttatctagtgtacaatatattttcatgggtttgtgatgaactgtgtatgttttggtttcccttttgcaccttgatgtttcttctttttattacttcctctgtccacatactaaataatgct
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| Protein seq | MLIFKTCASHSYLLLVSFLSTSYWSWKIQNSKKEKEKRESKPKKKRKKVNKKLSFLYLVYNIFSWVCDELCMFWFPFCTLMFLLFITSSVHILNNA |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.330990 | 6.824082 | 4.459390 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0676200 | SBH | 0.035527 | 0.072868 | 0.057889 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g45050 | SBH | 1.895145 | 2.270342 | 1.721375 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0676200 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0022020 | RBH | 1.617779 | 26.247786 | 10.415135 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0022650 | SBH | 0.107532 | 1.313498 | 0.726294 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0023450 | SBH | 0.0 | 0.0 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0022930 | SBH | 0.037749 | 0.227013 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0023130 | SBH | 0.0 | 2.865955 | 0.108137 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0410200 | SBH | 0.016715 | 0.3187185 | 0.003874 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0023960 | SBH | 0.470954 | 0.700124 | 2.179529 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0430000 | SBH | 0.0419675 | 0.0645025 | 0.058287 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0023840 | SBH | 1.203734 | 0.746390 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0022320 | RBH | 0.694426 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0023280 | SBH | 2.088418 | 9.239458 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0022990 | SBH | 1.870009 | 0.0 | 3.727034 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0023070 | SBH | 0.000000 | 0.094757 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G023320 | SBH | 0.129080 | 0.795419 | 0.599774 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0023750 | SBH | 0.152510 | 4.768662 | 0.673288 |
