Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsAzu_11g0022020 | OGI:11077650 | 16/16 | Azucena | AzucenaRS1 | Gramene(+IsoSeq) | Chr11:26266478-26273237 | ||||||||
| Gene Symbol | YR2, YR6, YR9, YR10, YR21, YR23, - | ||||||||||
| DNA seq | AGGGAGGGAGTAGCTGTGTAGATGTAGATTTGGTATTCATTCATTTTCAACGCTCCCCTCCTCCTCTCCTCCTTTCCCACGCGAGATGCAGATCGGGCTGGCGGCGCGTTCGTAGGCGGCGGCGATTCGGTGCACCGGCGAGCTAGCCACGACCATTGCCTCCTCCTCTCTACACTCCATCCAAGCACCGGCGCGCGCACCTCTCCCCCTCCATCCAAGCAGTAGCCTGCCTAGCCGTGCCTGTTTCCTTTCTCATCGGCAGTAGGGTGCGAAGGCGCGGCGGCGACCAGCAGCCCAGCTGCGCCCTATTCCCCTCTCTCGTCGGTTGCTGCTCTGCCCCGCGTTGTCCCTCCTCCTCTGCACTCGGATCTGCACACTTTTGTTCCTTCTCCAAGGTATGCAAACCCTAGCATTGGATATGATCTTGCTTGTCAATTTGTGATGTGAACAAGCAGCCATTGTGATGCAAACAAAAAAAATTCATTAAACTGTAAGATACAAAAAAAAAAGGGGCGCATCCATGACATGGGAGCATATTTATTTTTGTTTGATTGTCCTCTTGTACATGGAGAAAGAGGACCAAACTTGGAATATATAAAAATGGTTCATCTATATCTTGGAATATATAAAAATGAAATTAAGCTGCTAAGTGACTTTCAGTTGGTTAACTTACAGTCTAATAAAATGATAGAGGCCATGTATAGAATGTGGTAATATGTCCGTCTATGCCAATGTATCTCAGTAGCGTGCCTGTACCTTTAGGCACTAGGCAGTAATCACACACTGACAACTCTTCCCTCTATTGTTGTCTGATGTGTGAAACACAACAAATCTATACACGTAGTAGTGTGTGTTTCATAATATATACACATAGTAGTGTGTAGCAATGTTAACATGATAAATTTAAATTAGTCTTACAAAATACTTGCTAGTTATTATTACTATTATTATTTATACTAGAGAATTGCAATATTCTATACACAAAACGCTGGGTTGTGGAGCATAGAGAAGTGGGCAATACTTAAAATTGTATCAGAGTTAGTACCATGGGAAACAGATCCAGAAATTGTCTAGTCTGAATGTTCAGCTGTGCAATATGTACAAGGCTCTACCACCTCTCCTAAACCACTCCTTCATTGTTGCTTTGTTCCACCGTGGGATAACATTCTCATATTGCATTTCTACCAGTTGTGGGTAAGCCCAAGACATATAGCTGAACTTGTTTCCTTTATCTCCCTTATGCTAATCTGCAAATGCTCATTTTGGCTGTAGGTACGTAGTTTCTTAAGTATCAGTTGCATCCGTTTTTATGTGCCCTCTGTTTGATTGAGATGAGATTTATTAGGAAGGAAATGCCTGCTTCATCTGAGTAAACTCCTACATACTGCTCTCCTTGCAGCACTCCTTTATCGGTACTATCCCATTGATTCTTCTAGTTAATTAACATTCTGAATCATTCTAGTTCTACATTTATATAATGAGCATACACTGAACTTCATTTATTTTGACCCTTTTTTGCAGTTGTAACAGTGCAGACTGCAGTTCTCTCGTCATGGCTGGCTCATAATGTACTGAAATCTATTCTATATATTGGCTTATCCAATCAGTTGCATTTGGTATCCACTAAGCTCAATGTATCGAGCCTTTAAGTAGATTGGTCGGATTGAGCAAACTGCTATCTTGTGCGAGATGATTGCTACTATACCTTACTGCTAGCTCTGTAAGGTAAGATTTGCATCCTCACAGAATTTTTTTTTCCATGTCTAATATTCAAATCTAGCATGCATGTTCCTGTGATCATTGTATGGGATACAACTGGTAGGTGGGGAGGTGTTTTCGTGATGTTAATTGCCAGAATTTTTAAACTGAATTTGTTAACACAAATTTTGGAATCATTGGCAGACTACATTTTTGACATTCATCTGTTATTTTTTGTGGAATAACCTTTTGAGTTCCTCATATGGCAACAATAGTAAATACTTTAGGTGGATCATATGTCAATAAGTTGCAAGCAAGACACAAGTGGCCCTTGACCCTTCTCCCTTGTTGAAATTAATGTTGGCTGTGTTCCTATAGTGCCACCTATGTAGTTGGGTAGGGAGCCTGCAAAATCATTGGGTAAGCTCAAGATATATATAGCTAAACTTGTTTCCCTTTTTTTTCTTTAAGTTAATCTACAAATGTTCATCTTGATCACACGCATATGAAGTTTAAGGATGACTGGATCAGTTGGACCTATTTCTGTTTGTCATCTGAATGACCGATGAGATCCTCAAGGGAGGAAAAACCCTTCATCTAAGTAAATCTGTCTATACTGCTCGCCTTTCAGCACACTCTTAACTGGTTGATGTCGACAGTTGCATTCTCTATTGCCATTGATTCTTCTAGCAGTTACATTGTAAATCTTCTAGCTCTATACTTCTATATCTATATAATGCGCACACACTTCACATCTTCTTTTCTTCTGTCCCATTGTTTCGCAGTTTTAGCAGCATGGTCTCTGGTATCTTGATGACTGGCTCAAATGTTGTAATATCTATCAATTGATTTTGGTCTCCACTCTCCATTAATATGATCCAGTCTGTCAAGATCTTAGGCAGATGGGTTGGTCATCACCTCATCGGAGCAAACTGCTTCTGCAAGTTGACTTCTACTATAATATTGATCCTTGTGATGTACCATAATGTTCTTTTCAGCTGAATGATCACTCTGTAAGGTAAGATTTGCAAGTAGTTGATATTTGGTACGAGTAGCTTCTATTCACGATCTTTTTTGGTAATATAGTTAGTAGGAGGGGAGGGGTTTCCATTATTTTAACTACTACAATGGAAGTGTTATCACAACTTCTAGGCTAGCATGTCAATTTTGCCAGCCACTGGTCTCCTCACTTGCATCTGGGACTAGACACACACATTCACACTCACACTCACTCTACCAAAATCAAAAGGGAAGGCATCTTAAGTGAGTAGTTGATGCTCAATATCGCAACATGCAAGGTATGCTGAAGTTTAGTGTTAGCTCCTAATGAAACTTTCTAGATGCAAGAGCTATGGCATAGTTTCGGTATGCAAAATATAAATGGATATATATTTACTAATCTTCATATGGGATACATATGGTATACTTCCTCCGTTTCACAATGTAAGTCATTCTAGCATTTCCCGCATTCATATTGATGTTAATGAATCTAGATAGATATATATGTCTAGATTCATTAACATCAAAATGAATGTGGAAAATGCTAGAATGACTTACATTGTGAAACGGAGGGAGTAATATTTAGTGAACTTTATCTAATTTTTAAACTATGTTAATACAAGTTTTGGAATTATTTCCAGGTTACAGTTTTTACAGTCATATGGTATTTTTGGAGTACGACTTTTGAATTTGATGAATGGCAACAATACTAGTCACTTTTATTAGATCATGCATCCAAAAGTTGAATGGGATTATTACAGATGAGGCAATACTCATTTTAGGGGTAAAAGATGAACTTCAGGAACTGCAGCATCTAATAAGTATGATAGGTCATTTTGTTTCTGATGCTGAGGCAAGGAGGATAGAAGATTCAGCAGTTGAAAAATGGCTTGACCTGATAAAAGATGTTATTTATGATATTGATGATATTATTGATTTGGCTAGGTTTAAAGCAAGTGTGCTACTACCTGACCATCGTATGTCATCAAGGAGATCAACTGCTTGCAGTGGTCTTTCACTTTCCTATCGCTTTTCTAAAAGTTGGATGCATCATGAGGTTTCTGTAAAAATTAGAAGCCTCAACAAAAGGATACAGAACATTTCAAAGGATATGGTATTTTTAAAACTCAATTATACACAACCTATTGGAGGTGGTTCAGCATGGACACCGATAAAAAGTACTAGCCTGGTTGAACCCTTACTTGTCGGCAAGGAGATCATACATGCTTGTAGAGAAGTGGTGAATTTGGTGCTTGAAAATAAGGAAAGGATGGAGATTAAGGTTTACAAGATTGCTATTCTAGGAACAGGAGGAGTTGGCAAGACAACACTAGCTCAAAAAATATTCAATGATATAAAAATAAAAGGAAGATTCGACAAGCATGCCTGGATTTCTGTTTCTATGGAGTATTCTATTGTTTCTCTTTTAAAAGAAGTTCTTTGTCATATGGATATTCCATATGAGAAAGACGAATCTATTGGAGAGCTCCAACACAGGCTCGAATCAGGCATTAGAAATAAGAGTTTTTTCCTTGTGATGGATGATGTGTGGCAGTCTGAAACATGGACAAATTTACTAAGAAATCCACTGCATGCTGCGTCTACAGGAACAATTCTAGTAACTACTCGACTTGACACTATTGCTCTAGCAATTGGGGTGCACCACACTCATAGAGTTGATTTGATGTCAGACAGTGTAGGATGGGAACTACTTTGGAAGAGCATGAACATCAATGAAGAGAAACAAGTACAAAATTTACGTGACATTGGTATTGAGATTGTTCACAAATGCGGTGGCCTTCCTCTTGCAATCAAGGTTATTTCCAGCGTTTTGGCAACCCGAGATCAAACAAAGGATGCATGGCTACGAATTTTAGAGAAAAATGCTTGGTCCATGAGCCAACTTCCTCATCCAATTAGAGGTGCTTTATATCTAAGTTATGATGCGCTACCAGACCAGCTGAAGCAATGCTTTCTTTATTGTGCAATGTATCCTGAAGATGCAATCATATGCCGTGATGATCTTGTCAGAATGTGGGTAGCTGAAGGCTTTATAGATCAGCATGAAGGGCAACTACTAGAAGACACAGCAGAGGAATACTATTATGAGCTGATCCAACGGAACTTGCTCCAACCTCATGGCTATTATTTAGACAACAGCAAATGCATCTTGCATGATCTCTTAAGGCAACTTGCTTGTTATTTATCAAGAGAAGAATGTTTTGTTGGAGACCCAGATTCCCTAGAGAGTAATAATATGTGCAAATTACGACGTATTTCAATTATCACTGAGAAGGACATGGTAGTTATACCTAGCATGAATAAGGATCAATATAATGTGAGGACTCTTGTAACATTTCATGGGAAGTCACAAAGAATCGATAATTCACTTTTCAAGAGACTTGCATATCTTCATGTTTTGGACCTGACTGGCTTACTTGTAGAAAGCATTCAAAGCCATATTGGAAATCTGATTCATCTGCGTTTGATTGATCTTAGTGGGACATGCATATCTCATCTCCCAGAGTCCATTGGTAACCTTCAAAATCTTCAGATATTGAGCCTGCAGGGGTGTAAAAATTTGCACATGCTACCTTCCGCAATCACTCAGTTGTTCAATTTGAGGCGGCTTGGTCTCGGTGAAACACCGATAAATCAGGTTTCGAAAGGGATAGGAAGACTAAAATTCCTGAATGATTTAGGAGGATTTCCTATTGGTGGTGGAAGTGACAGTACTAAAATGCAAGATGGATGGAATTTAGAAGAGTTGGCTCATCTTTTACAGTTGAGGCGGCTTGATATGGTAAAATTGGAAAAAGGTACTCCTTGTAGCAGCAGAAACTCATTATTGCTAACTGACAAAAAGCATCTCAAATTTCTACACCTGGGCTGCACTAAACCTATAGATAAAGCATATTCAGTGGAACAAGTTAGCAACATTAAGAAGATTTTTGAACAACTAAAGCCTCCATGCAACTTAGAAAATCTAGTTATTACAAGATTCTTTGGTCAGATGTTCCCCACCTGGCTTGGTACTACTCATTTGTATTCAGTGAAATGCTTGAAACTTATAAATTGCAAAACCTGCACGCATCTTCCGCCAATTGGGCAGCTACCCAACTTGAAATACCTGAAAATTTTGGGAGCAACCGCAATTACTAAGATCGGTCCTGAGTTTGTAGGTCCCTGGATGGGCAATATTAGATCTATAGAGGGAGTTGCTTTTCCGAAGCTCAAAATGTTGATCATCATTGATATGCCCAACTGGGAGGAGTGGTCCTTTGTTGAAAAAGAAGAGGAGGAAGTTGCTGCAACAGTTAAGGAAGGGGGAGAGGATGGAGCTGCTGCAAAGCACTCTGCCCCATCTCCAAGGTCATTACTTCTGCTTCCCTGTTTGAAGAATTTGGAACTTGTGGGTTGCCCCAAGCTCAGAGCTCTCCCGCGACAGCTCGGACAGCAGGCCATCAGCTTGAAGGACCTCCATATAAGAGGGGCAAGAAGCTTGAAGACAGTAGAGGACCTCCCGTTCCTCTCTGATCGTCTTTCAGTTGGTGGATGTGATGGCCTGGAGAGGGTTTCCAACCTTCCCAAAGCAAGAGCATTGTATGTAAGTGTTTGTCCAAGTTTGAGTTGTGTTAAGGAGTTGAGAAATTTGAAGCAGGTATGTCTGGGCGTGGATATGCAAGGGATTGCATCTCGGTGGGTGCCTGGACTTCAAGAGCAACGTTTCCAGCTCCATGGAGATGACCTGGAGGTTTGCCCATGGTCGGAGCTGGATGAACCCACGTGGCCTAGAATCTGAAGGTCAACACCCAACTGGAAGGCATTAATGGAGACATAAGGTAGTAATGACACTAGCTTTGCATTTTAGTGCGTTCCAAAAGTTCTATTTGATTCCAAATTTGCAACCTTCAGGCCCAATCGTGTGATGATGTTATCTGTATAATGTATTCTACATTACATTCATTATTGTTTCTTAAAACTATCAGCTCTAGCCAATGGAGTTTTTATAAAGTCTAGCAGTGACTAGCTTAACACCATAGTTAATACATGTGGATCATCA
More
|
||||||||||
| CDS seq | ATGGCAACAATACTAGTCACTTTTATTAGATCATGCATCCAAAAGTTGAATGGGATTATTACAGATGAGGCAATACTCATTTTAGGGGTAAAAGATGAACTTCAGGAACTGCAGCATCTAATAAGTATGATAGGTCATTTTGTTTCTGATGCTGAGGCAAGGAGGATAGAAGATTCAGCAGTTGAAAAATGGCTTGACCTGATAAAAGATGTTATTTATGATATTGATGATATTATTGATTTGGCTAGGTTTAAAGCAAGTGTGCTACTACCTGACCATCGTATGTCATCAAGGAGATCAACTGCTTGCAGTGGTCTTTCACTTTCCTATCGCTTTTCTAAAAGTTGGATGCATCATGAGGTTTCTGTAAAAATTAGAAGCCTCAACAAAAGGATACAGAACATTTCAAAGGATATGGTATTTTTAAAACTCAATTATACACAACCTATTGGAGGTGGTTCAGCATGGACACCGATAAAAAGTACTAGCCTGGTTGAACCCTTACTTGTCGGCAAGGAGATCATACATGCTTGTAGAGAAGTGGTGAATTTGGTGCTTGAAAATAAGGAAAGGATGGAGATTAAGGTTTACAAGATTGCTATTCTAGGAACAGGAGGAGTTGGCAAGACAACACTAGCTCAAAAAATATTCAATGATATAAAAATAAAAGGAAGATTCGACAAGCATGCCTGGATTTCTGTTTCTATGGAGTATTCTATTGTTTCTCTTTTAAAAGAAGTTCTTTGTCATATGGATATTCCATATGAGAAAGACGAATCTATTGGAGAGCTCCAACACAGGCTCGAATCAGGCATTAGAAATAAGAGTTTTTTCCTTGTGATGGATGATGTGTGGCAGTCTGAAACATGGACAAATTTACTAAGAAATCCACTGCATGCTGCGTCTACAGGAACAATTCTAGTAACTACTCGACTTGACACTATTGCTCTAGCAATTGGGGTGCACCACACTCATAGAGTTGATTTGATGTCAGACAGTGTAGGATGGGAACTACTTTGGAAGAGCATGAACATCAATGAAGAGAAACAAGTACAAAATTTACGTGACATTGGTATTGAGATTGTTCACAAATGCGGTGGCCTTCCTCTTGCAATCAAGGTTATTTCCAGCGTTTTGGCAACCCGAGATCAAACAAAGGATGCATGGCTACGAATTTTAGAGAAAAATGCTTGGTCCATGAGCCAACTTCCTCATCCAATTAGAGGTGCTTTATATCTAAGTTATGATGCGCTACCAGACCAGCTGAAGCAATGCTTTCTTTATTGTGCAATGTATCCTGAAGATGCAATCATATGCCGTGATGATCTTGTCAGAATGTGGGTAGCTGAAGGCTTTATAGATCAGCATGAAGGGCAACTACTAGAAGACACAGCAGAGGAATACTATTATGAGCTGATCCAACGGAACTTGCTCCAACCTCATGGCTATTATTTAGACAACAGCAAATGCATCTTGCATGATCTCTTAAGGCAACTTGCTTGTTATTTATCAAGAGAAGAATGTTTTGTTGGAGACCCAGATTCCCTAGAGAGTAATAATATGTGCAAATTACGACGTATTTCAATTATCACTGAGAAGGACATGGTAGTTATACCTAGCATGAATAAGGATCAATATAATGTGAGGACTCTTGTAACATTTCATGGGAAGTCACAAAGAATCGATAATTCACTTTTCAAGAGACTTGCATATCTTCATGTTTTGGACCTGACTGGCTTACTTGTAGAAAGCATTCAAAGCCATATTGGAAATCTGATTCATCTGCGTTTGATTGATCTTAGTGGGACATGCATATCTCATCTCCCAGAGTCCATTGGTAACCTTCAAAATCTTCAGATATTGAGCCTGCAGGGGTGTAAAAATTTGCACATGCTACCTTCCGCAATCACTCAGTTGTTCAATTTGAGGCGGCTTGGTCTCGGTGAAACACCGATAAATCAGGTTTCGAAAGGGATAGGAAGACTAAAATTCCTGAATGATTTAGGAGGATTTCCTATTGGTGGTGGAAGTGACAGTACTAAAATGCAAGATGGATGGAATTTAGAAGAGTTGGCTCATCTTTTACAGTTGAGGCGGCTTGATATGGTAAAATTGGAAAAAGGTACTCCTTGTAGCAGCAGAAACTCATTATTGCTAACTGACAAAAAGCATCTCAAATTTCTACACCTGGGCTGCACTAAACCTATAGATAAAGCATATTCAGTGGAACAAGTTAGCAACATTAAGAAGATTTTTGAACAACTAAAGCCTCCATGCAACTTAGAAAATCTAGTTATTACAAGATTCTTTGGTCAGATGTTCCCCACCTGGCTTGGTACTACTCATTTGTATTCAGTGAAATGCTTGAAACTTATAAATTGCAAAACCTGCACGCATCTTCCGCCAATTGGGCAGCTACCCAACTTGAAATACCTGAAAATTTTGGGAGCAACCGCAATTACTAAGATCGGTCCTGAGTTTGTAGGTCCCTGGATGGGCAATATTAGATCTATAGAGGGAGTTGCTTTTCCGAAGCTCAAAATGTTGATCATCATTGATATGCCCAACTGGGAGGAGTGGTCCTTTGTTGAAAAAGAAGAGGAGGAAGTTGCTGCAACAGTTAAGGAAGGGGGAGAGGATGGAGCTGCTGCAAAGCACTCTGCCCCATCTCCAAGGTCATTACTTCTGCTTCCCTGTTTGAAGAATTTGGAACTTGTGGGTTGCCCCAAGCTCAGAGCTCTCCCGCGACAGCTCGGACAGCAGGCCATCAGCTTGAAGGACCTCCATATAAGAGGGGCAAGAAGCTTGAAGACAGTAGAGGACCTCCCGTTCCTCTCTGATCGTCTTTCAGTTGGTGGATGTGATGGCCTGGAGAGGGTTTCCAACCTTCCCAAAGCAAGAGCATTGTATGTAAGTGTTTGTCCAAGTTTGAGTTGTGTTAAGGAGTTGAGAAATTTGAAGCAGGTATGTCTGGGCGTGGATATGCAAGGGATTGCATCTCGGTGGGTGCCTGGACTTCAAGAGCAACGTTTCCAGCTCCATGGAGATGACCTGGAGGTTTGCCCATGGTCGGAGCTGGATGAACCCACGTGGCCTAGAATCTGA
More
|
||||||||||
| Protein seq | MATILVTFIRSCIQKLNGIITDEAILILGVKDELQELQHLISMIGHFVSDAEARRIEDSAVEKWLDLIKDVIYDIDDIIDLARFKASVLLPDHRMSSRRSTACSGLSLSYRFSKSWMHHEVSVKIRSLNKRIQNISKDMVFLKLNYTQPIGGGSAWTPIKSTSLVEPLLVGKEIIHACREVVNLVLENKERMEIKVYKIAILGTGGVGKTTLAQKIFNDIKIKGRFDKHAWISVSMEYSIVSLLKEVLCHMDIPYEKDESIGELQHRLESGIRNKSFFLVMDDVWQSETWTNLLRNPLHAASTGTILVTTRLDTIALAIGVHHTHRVDLMSDSVGWELLWKSMNINEEKQVQNLRDIGIEIVHKCGGLPLAIKVISSVLATRDQTKDAWLRILEKNAWSMSQLPHPIRGALYLSYDALPDQLKQCFLYCAMYPEDAIICRDDLVRMWVAEGFIDQHEGQLLEDTAEEYYYELIQRNLLQPHGYYLDNSKCILHDLLRQLACYLSREECFVGDPDSLESNNMCKLRRISIITEKDMVVIPSMNKDQYNVRTLVTFHGKSQRIDNSLFKRLAYLHVLDLTGLLVESIQSHIGNLIHLRLIDLSGTCISHLPESIGNLQNLQILSLQGCKNLHMLPSAITQLFNLRRLGLGETPINQVSKGIGRLKFLNDLGGFPIGGGSDSTKMQDGWNLEELAHLLQLRRLDMVKLEKGTPCSSRNSLLLTDKKHLKFLHLGCTKPIDKAYSVEQVSNIKKIFEQLKPPCNLENLVITRFFGQMFPTWLGTTHLYSVKCLKLINCKTCTHLPPIGQLPNLKYLKILGATAITKIGPEFVGPWMGNIRSIEGVAFPKLKMLIIIDMPNWEEWSFVEKEEEEVAATVKEGGEDGAAAKHSAPSPRSLLLLPCLKNLELVGCPKLRALPRQLGQQAISLKDLHIRGARSLKTVEDLPFLSDRLSVGGCDGLERVSNLPKARALYVSVCPSLSCVKELRNLKQVCLGVDMQGIASRWVPGLQEQRFQLHGDDLEVCPWSELDEPTWPRI |
||||||||||
| Function | Putative disease resistance protein RGA3 [UniProtKB/Swiss-Prot:Q7XA40] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsAzu_11g0022020 | OsAzu_11g0022020.01 | Chr11 | 26269872 | 26272976 | + | NAM | ||
| CDS seq | ATGGCAACAATACTAGTCACTTTTATTAGATCATGCATCCAAAAGTTGAATGGGATTATTACAGATGAGGCAATACTCATTTTAGGGGTAAAAGATGAACTTCAGGAACTGCAGCATCTAATAAGTATGATAGGTCATTTTGTTTCTGATGCTGAGGCAAGGAGGATAGAAGATTCAGCAGTTGAAAAATGGCTTGACCTGATAAAAGATGTTATTTATGATATTGATGATATTATTGATTTGGCTAGGTTTAAAGCAAGTGTGCTACTACCTGACCATCGTATGTCATCAAGGAGATCAACTGCTTGCAGTGGTCTTTCACTTTCCTATCGCTTTTCTAAAAGTTGGATGCATCATGAGGTTTCTGTAAAAATTAGAAGCCTCAACAAAAGGATACAGAACATTTCAAAGGATATGGTATTTTTAAAACTCAATTATACACAACCTATTGGAGGTGGTTCAGCATGGACACCGATAAAAAGTACTAGCCTGGTTGAACCCTTACTTGTCGGCAAGGAGATCATACATGCTTGTAGAGAAGTGGTGAATTTGGTGCTTGAAAATAAGGAAAGGATGGAGATTAAGGTTTACAAGATTGCTATTCTAGGAACAGGAGGAGTTGGCAAGACAACACTAGCTCAAAAAATATTCAATGATATAAAAATAAAAGGAAGATTCGACAAGCATGCCTGGATTTCTGTTTCTATGGAGTATTCTATTGTTTCTCTTTTAAAAGAAGTTCTTTGTCATATGGATATTCCATATGAGAAAGACGAATCTATTGGAGAGCTCCAACACAGGCTCGAATCAGGCATTAGAAATAAGAGTTTTTTCCTTGTGATGGATGATGTGTGGCAGTCTGAAACATGGACAAATTTACTAAGAAATCCACTGCATGCTGCGTCTACAGGAACAATTCTAGTAACTACTCGACTTGACACTATTGCTCTAGCAATTGGGGTGCACCACACTCATAGAGTTGATTTGATGTCAGACAGTGTAGGATGGGAACTACTTTGGAAGAGCATGAACATCAATGAAGAGAAACAAGTACAAAATTTACGTGACATTGGTATTGAGATTGTTCACAAATGCGGTGGCCTTCCTCTTGCAATCAAGGTTATTTCCAGCGTTTTGGCAACCCGAGATCAAACAAAGGATGCATGGCTACGAATTTTAGAGAAAAATGCTTGGTCCATGAGCCAACTTCCTCATCCAATTAGAGGTGCTTTATATCTAAGTTATGATGCGCTACCAGACCAGCTGAAGCAATGCTTTCTTTATTGTGCAATGTATCCTGAAGATGCAATCATATGCCGTGATGATCTTGTCAGAATGTGGGTAGCTGAAGGCTTTATAGATCAGCATGAAGGGCAACTACTAGAAGACACAGCAGAGGAATACTATTATGAGCTGATCCAACGGAACTTGCTCCAACCTCATGGCTATTATTTAGACAACAGCAAATGCATCTTGCATGATCTCTTAAGGCAACTTGCTTGTTATTTATCAAGAGAAGAATGTTTTGTTGGAGACCCAGATTCCCTAGAGAGTAATAATATGTGCAAATTACGACGTATTTCAATTATCACTGAGAAGGACATGGTAGTTATACCTAGCATGAATAAGGATCAATATAATGTGAGGACTCTTGTAACATTTCATGGGAAGTCACAAAGAATCGATAATTCACTTTTCAAGAGACTTGCATATCTTCATGTTTTGGACCTGACTGGCTTACTTGTAGAAAGCATTCAAAGCCATATTGGAAATCTGATTCATCTGCGTTTGATTGATCTTAGTGGGACATGCATATCTCATCTCCCAGAGTCCATTGGTAACCTTCAAAATCTTCAGATATTGAGCCTGCAGGGGTGTAAAAATTTGCACATGCTACCTTCCGCAATCACTCAGTTGTTCAATTTGAGGCGGCTTGGTCTCGGTGAAACACCGATAAATCAGGTTTCGAAAGGGATAGGAAGACTAAAATTCCTGAATGATTTAGGAGGATTTCCTATTGGTGGTGGAAGTGACAGTACTAAAATGCAAGATGGATGGAATTTAGAAGAGTTGGCTCATCTTTTACAGTTGAGGCGGCTTGATATGGTAAAATTGGAAAAAGGTACTCCTTGTAGCAGCAGAAACTCATTATTGCTAACTGACAAAAAGCATCTCAAATTTCTACACCTGGGCTGCACTAAACCTATAGATAAAGCATATTCAGTGGAACAAGTTAGCAACATTAAGAAGATTTTTGAACAACTAAAGCCTCCATGCAACTTAGAAAATCTAGTTATTACAAGATTCTTTGGTCAGATGTTCCCCACCTGGCTTGGTACTACTCATTTGTATTCAGTGAAATGCTTGAAACTTATAAATTGCAAAACCTGCACGCATCTTCCGCCAATTGGGCAGCTACCCAACTTGAAATACCTGAAAATTTTGGGAGCAACCGCAATTACTAAGATCGGTCCTGAGTTTGTAGGTCCCTGGATGGGCAATATTAGATCTATAGAGGGAGTTGCTTTTCCGAAGCTCAAAATGTTGATCATCATTGATATGCCCAACTGGGAGGAGTGGTCCTTTGTTGAAAAAGAAGAGGAGGAAGTTGCTGCAACAGTTAAGGAAGGGGGAGAGGATGGAGCTGCTGCAAAGCACTCTGCCCCATCTCCAAGGTCATTACTTCTGCTTCCCTGTTTGAAGAATTTGGAACTTGTGGGTTGCCCCAAGCTCAGAGCTCTCCCGCGACAGCTCGGACAGCAGGCCATCAGCTTGAAGGACCTCCATATAAGAGGGGCAAGAAGCTTGAAGACAGTAGAGGACCTCCCGTTCCTCTCTGATCGTCTTTCAGTTGGTGGATGTGATGGCCTGGAGAGGGTTTCCAACCTTCCCAAAGCAAGAGCATTGTATGTAAGTGTTTGTCCAAGTTTGAGTTGTGTTAAGGAGTTGAGAAATTTGAAGCAGGTATGTCTGGGCGTGGATATGCAAGGGATTGCATCTCGGTGGGTGCCTGGACTTCAAGAGCAACGTTTCCAGCTCCATGGAGATGACCTGGAGGTTTGCCCATGGTCGGAGCTGGATGAACCCACGTGGCCTAGAATCTGA
More
|
|||||||
| Protein seq | MATILVTFIRSCIQKLNGIITDEAILILGVKDELQELQHLISMIGHFVSDAEARRIEDSAVEKWLDLIKDVIYDIDDIIDLARFKASVLLPDHRMSSRRSTACSGLSLSYRFSKSWMHHEVSVKIRSLNKRIQNISKDMVFLKLNYTQPIGGGSAWTPIKSTSLVEPLLVGKEIIHACREVVNLVLENKERMEIKVYKIAILGTGGVGKTTLAQKIFNDIKIKGRFDKHAWISVSMEYSIVSLLKEVLCHMDIPYEKDESIGELQHRLESGIRNKSFFLVMDDVWQSETWTNLLRNPLHAASTGTILVTTRLDTIALAIGVHHTHRVDLMSDSVGWELLWKSMNINEEKQVQNLRDIGIEIVHKCGGLPLAIKVISSVLATRDQTKDAWLRILEKNAWSMSQLPHPIRGALYLSYDALPDQLKQCFLYCAMYPEDAIICRDDLVRMWVAEGFIDQHEGQLLEDTAEEYYYELIQRNLLQPHGYYLDNSKCILHDLLRQLACYLSREECFVGDPDSLESNNMCKLRRISIITEKDMVVIPSMNKDQYNVRTLVTFHGKSQRIDNSLFKRLAYLHVLDLTGLLVESIQSHIGNLIHLRLIDLSGTCISHLPESIGNLQNLQILSLQGCKNLHMLPSAITQLFNLRRLGLGETPINQVSKGIGRLKFLNDLGGFPIGGGSDSTKMQDGWNLEELAHLLQLRRLDMVKLEKGTPCSSRNSLLLTDKKHLKFLHLGCTKPIDKAYSVEQVSNIKKIFEQLKPPCNLENLVITRFFGQMFPTWLGTTHLYSVKCLKLINCKTCTHLPPIGQLPNLKYLKILGATAITKIGPEFVGPWMGNIRSIEGVAFPKLKMLIIIDMPNWEEWSFVEKEEEEVAATVKEGGEDGAAAKHSAPSPRSLLLLPCLKNLELVGCPKLRALPRQLGQQAISLKDLHIRGARSLKTVEDLPFLSDRLSVGGCDGLERVSNLPKARALYVSVCPSLSCVKELRNLKQVCLGVDMQGIASRWVPGLQEQRFQLHGDDLEVCPWSELDEPTWPRI
More
|
|||||||
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsAzu_11g0022020 | OsAzu_11g0022020.02 | Chr11 | 26266478 | 26273237 | + | IsoSeq | ||
| CDS seq | ATGCAACTTAGAAAATCTAGTTATTACAAGATTCTTTGGTCAGATGTTCCCCACCTGGCTTGGTACTACTCATTTGTATTCAGTGAAATGCTTGAAACTTATAAATTGCAAAACCTGCACGCATCTTCCGCCAATTGGGCAGCTACCCAACTTGAAATACCTGAAAATTTTGGGAGCAACCGCAAT |
|||||||
| Protein seq | MQLRKSSYYKILWSDVPHLAWYYSFVFSEMLETYKLQNLHASSANWAATQLEIPENFGSNRN |
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 1.617779 | 26.247786 | 10.415135 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0676200 | SBH | 0.035527 | 0.072868 | 0.057889 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g44960 | SBH | 0.100980 | 0.000000 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0676200 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0021580 | SBH | 0.0 | 1.526447 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0022010 | RBH | 0.330990 | 6.824082 | 4.459390 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0023090 | RBH | 0.067817 | 0.359010 | 0.315617 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0022930 | SBH | 0.037749 | 0.227013 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0023510 | SBH | 0.000000 | 0.279106 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0420800 | SBH | 0.2352695 | 1.2420205 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0023960 | SBH | 0.470954 | 0.700124 | 2.179529 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0429700 | SBH | 0.012926 | 1.070222 | 0.2560875 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0023840 | SBH | 1.203734 | 0.746390 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0022320 | RBH | 0.694426 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0023280 | SBH | 2.088418 | 9.239458 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0022990 | SBH | 1.870009 | 0.0 | 3.727034 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0023070 | SBH | 0.000000 | 0.094757 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G023320 | SBH | 0.129080 | 0.795419 | 0.599774 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0023750 | SBH | 0.152510 | 4.768662 | 0.673288 |
