Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsARC_11g0022930 | OGI:11077650 | 16/16 | ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | Chr11:27053265-27059000 | ||||||||
| Gene Symbol | YR2, YR6, YR9, YR10, YR21, YR23, DRP-RP13, OsDRP-RP13 | ||||||||||
| DNA seq | ACTGTATGGCATTCTTGCATTACATTTCTACCAGCTGCGGGTAAGCTCAAGACATATAGCTGAATTTACTTTCTTTGTTTGCTTAAGTTAATCTATAAATGCTCATTTGACTGCAGGCTCTGAGTTTAATCAGGATCAGTTGCACCCATAACTGTCCGCGCTCTTATTGATTGAGACGAGATCTACTAGGAAGGAAAAATCTGCTTCATCTGAATAAACACATATATACCGATCTCTCCTTGCAGCACACACTCTCTCTTCGGAGGATGTCAACACATTTAACTGTATTTCTGGTATTATCCCATTGATCCTTGTAGTTAACCTTCTGAATCATTCAAGTTCCACATCTGTATAATGAGCATACACTTCATCTCTTATTTTGATCTCTGATCTCTCCCCTTTTTGCAGTTGTAGCAGCACAATCAGCGGTTCTCTGTTGATGATTGGCTCATAATGTTCTGAAATCCATTCTACACTTTGGCGTATCCACTCAGTTTCTTTTGACTTCACTAATCTGAGTCTGTCGAGTATCCCAAGTAGATGGGTCAGAGCAAACTTCCAGCTTGTGCAAGATGAATGCTATTGAGCCTTGTTACGTGCAGACTTATGTCTTCTCATGCTGAATTATCACTCCATAAGGTAAGATTTGCATGCAGTATACTTGAGTAAAACCCCTCAACTTGTTGCCGGTTACTTCTTTCTCCTCGTTTACCTTTAACCCAAGAAACTCACTGAATTTTTTTTTCCTTTCTGCTGACCTCCCCCCTGTTCTTCTCCTGTCACCTTTGGTGACTCCTGTACAGTGCTTACCTCTCTAAATACAAAACCAGCTCCGCTGGCTTAGGTTTCAAGAAATGTAACCCCCATTATTCCAGTTCTTTAGCTTCAGTATGCTAACTTGCTCAATACACATGGCAAAACAACCTATTAAAAAACATACCGAAATGTAACCCCATTATTCCAGTCCTTTACTGACATGTGCCCCTCTGTTGCAAAGATACTCTGAAACTGATTGAACTTTGTCCATTTTCAGATCGTGTAATTGTCATAAATAATTTGATTGGAAATTTTTGGTGCATCACCATCAACGAGTTTCTCTATGGCAACAATACTGGGTTCTTTGGTTGGATCATGCGTAAACAAGTTGCAAGGGATCATTACAGAGGAGGCAATACTAATTTTAGGTGTAAAAGATGAGCTTGAAGAACTGCAGCGAAGAACAGATCTCATAAGATATTCTCTTCAGGATGCTGAGGCAAGGAGGATGAAAGATTCTGCAGTTCAAAAATGGCTTGACCAGCTAAGAGATGTTATGTATGATGTTGATGATATTATTGATTTGGCTAGATTTAAAGGAAGTGTCCTACTACCTAACTATCCTATGTCATCGTCAAGGAAATCTACTGCTTGCAGTGGCCTTTCACTTTCATCCTGCTTTTCTAATATTCGTATACGTCATGAAGTTGCTGTAAAAATTAGAAGCCTCAACAAAAAGATAGATAACATTTCAAAGGATGATGTATTTTTAAAACTCAGCCGCACACAACATAATGGAAGTGGTTCAGCATGGACACCTATAGAAAGCTCCAGCCTAGTTGAACCTAACCTTGTGGGCAAGGAGGTCGTACATGCTTGCAGAGAAGTGGTGGATTTGGTGCTTGCACACAAGGCAAAGAATGTTTACAAGCTTGCTATTGTTGGAACAGGGGGAGTTGGCAAGACAACACTAGCTCAGAAAATATTCAATGATAAAAAATTACAAGGGAGATTTGACCATCGTGCCTGGGTTTGTGTCTCCAAGGAGTATTCTATGGTTTCCCTTTTGACACAAGTTCTTAGTAATATGAAAATTCATTATGAACAAAATGAATCAGTTGGGAACCTTCAAAGCAAACTCAAAGCAGGCATTGCAGACAAGAGTTTTTTCCTTGTGTTGGATGATGTATGGCACTATAAAGCATGGGAAGATTTACTAAGAACTCCACTAAATGCGGCAGCCACAGGAATAATTCTAGTAACTACTCGAGATGAAACTATTGCTCGTGTAATTGGGGTGGACCGGACTCATAGAGTTGATTTGATGTCAGCCGATGTAGGATGGGAGTTACTTTGGAGGAGCATGAACATCAAAGAAGAGAAACAAGTGAAAAATCTACGGGACACGGGTATCGAGATTGTCCGCAAATGTGGTGGCCTACCTCTTGCAATCAGGGCTATTGCCAAAGTCTTAGCAAGCCTGCAAGATCAAACAGAGAATGAGTGGAGACAGATATTGGGGAAAAATGCCTGGTCCATGAGCAAACTTCCTGATGAATTAAATGGTGCTTTATATCTGAGTTATGAAGTGCTGCCGCACCAGCTGAAGCAATGTTTTCTTTATTGTGCACTTTTCCCTGAAGATGCAACCATTTTCTGTGGTGATCTTACTAGGATGTGGGTGGCTGAAGGCTTTATAGATGAGCAAGAAGGCCAATTACTAGAAGACACAGCAGAGAGGTATTATCATGAGTTGATCCATCGGAACTTGCTCCAACCAGATGGTTTATATTTTGACCACAGCAGGTGCAAGATGCATGATCTCTTAAGGCAACTTGCTTCTTATTTGTCAAGAGAAGAATGTTTTGTTGGAGACCCAGAGTCACTAGGGACTAATACTATGTGCAAAGTACGACGTATTTCAGTTGTCACTGAGAAGGACATAGTGGTGTTACCTAGCATGGACAAGGATCAATATAAAGTGAGGTGTTTTACAAACTTATCTGGGAAGTCAGCAAGAATTGATAATTCACTTTTCAAGAGACTTGTATGTCTTCGCATTTTGGATTTGTCTGACTCACTTGTACATGACATCCCAGGTGCGATTGGAAATTTGATTTATCTGCGGTTGCTCGATCTTGACAGGACAAATATATGTTCTCTCCCAGAGGCCATTGGCTCCCTTCAAAGCCTTCAAATATTGAATTTGCAGGGGTGTGAATCTTTGCGCAGACTTCCTTTGGCAACAACTCAACTATGCAATTTGAGGCGGCTTGGTCTTGATGGTACTCCAATAAACCAGGTTCCAAAAGGGATAGGAAGACTGAAATTTCTCAATGATTTAGAAGGATTTCCTATCGGTGGTGGAAATGACAATACCAAAATACAAGATGGATGGAATTTGGAAGAGTTGGCTCATCTTTCACAGTTGAGGTGTCTTGATATGATAAAATTGGAGAGAGCTACTCCTTGCAGCAGTAGAGACCCATTTCTACTAACAGAGAAAAAGCATCTCAAAGTTCTGAATCTACACTGCACTGAACAGACAGATGAAGCATATTCAGAGGAAGGCATTAGCAATGTTGAGAAGATCTTTGAGAAGCTAGCACCTCCACACAACTTAGAAGATCTTGTTATTGGGAATTTCTTTGGGCGAAGGTTCCCCACCTGGCTTGGTACTAACCATTTGTCTTCAGTGAGATCCGTGATCCTCATAGATTGCAAATCTTGTGTGCATCTTCCCGCAATCGGACAGCTACCAAACTTGAAATACCTAAGAATTAATGGAGCAAGTGCAATCACCAAGATTGGACCCGAATTTGTTGGCTGCTGGGAGGGTAATCTTAGATCCACAGAGGCAGTTGCTTTCCCCAAGCTTGAAGTGTTGGTCATCAACGATATGCCCAACTGGGAGGAGTGGTCCTTTGTTGAAGAAGAAGAAGAGGTGCAGGAGGAGGAAGCATCTGCAGCAGCCAAGGAAGGGGGAGAGGATGGAACTGCTGCTTCGAAGCAAAAGGGGAAAGAAGCCCCGTCTCCAACTCTGAGGTCGTCGTGGCTGCTGCCTTGTTTGAAGGAGTTGTATCTTGAGGAGTGCCCCAAGCTGAGGGGTCTCCCACGACAGCTTAGACAGCAGGCCACCAACTTGAAGGACCTCCAATTAAGAGAAGCAGATTGCTTGAAGAAGATGGAAGACCTCCGGTTCCTCTGCTTCCTTTTAGTTGAAGGATGTGAAGGCCTGGAGAGGCTCTCCAACCTTCCCCAAGTGAGAGACCTGCGTGTAACACGTTGCCCAAATTTGAGGCATGTTGAGGAGTTGGGCGGTTTGGAGTGGCTATGGCTAGACGAGGGTATGCTGGAGATATCTCAGCTGTGGGTCCCTGGGCTTCAAGAGCAGCACCGCCAACTCCATGGAGACGAGCTCGAGATCAACGACTGGCCTCACACATAGAATTAGATGACATAAGGTATGTACACTGATTGATTGATTTGGATTTTGCACCCTAATCTGCTATGCTGTTCGCATTTGATGGCCTTGTTAGTTCTTTAGTTGGGCACATTGACTGTTTTTTTGACCTGTATGTTTTGCTTTCTTTTGTTGCATAACTTTCTTATGATCAAGGTTTCAGTGACGATGTGTTAAACACAAACCAATTAGGTGGCCATACCCTTTACTTATGTCGTGACCATATGGTGTCTTGTTGACACCCTGAATGTGCTATGCTAAATTAATATTCTATCCTACATGTACTATGATATGCAGCAGTGCATTACCCAGAAAATAGAAGTATTGATTAGTGCTATACACGTACTCCAGATAAATATGGTACCGGTTATATCATATAGAATTGCACATGATTGTATTGCTGTTCACTAGGGTTGGGGACAACAATTGTTTAGCCTTTTGGTACACAAACTGTATAGTGCAGGACTCTGCGATGCTAGGATGCAAACCAAACTTGCCTGCATTTTGCCTTCAATGCTACAAGGGTCTTTTATGTTAAGGGTGTTGTGTGTTTAGGGGTATATCGGTAATTTCACTTGTCTATGTACTCAACATATATATGCCCTTTGGGCTAACTCAAAAGTAACTATTCATTCCCTAAATTGTCACATTTTATATCGGATCTTGCATGTGTTAGGCCAACATAGTATTAGTCATTTTTGATTTGGCCAAAATTAGTCATGCCCAGCGAAAGGGCCTGTAGCCTAGTGGTTACAAGAGCCTCAGTAGCACCTGAGGTCCTGGGTTCGACTCCCCGTGGGAGCGAATTTTTCAGGATTTAACGGCGTTGTGCTTTCAGTGGTAGGCGACGTACCCGTCGACAGCGAAGCGCCTGTGGTGACTTCGTGAATCTCTCCAGGATTTGCCGGCCCAGTCTTCGAAGATGCTTATAGGGGTAGGGTTTGCGTGCGAGCGTTCATAGGGGTGAGTGCGCGTGCGTTGTGAGTGTCTGCGTTGTACTGTGTAATTCTCAAAAAAAAAAAAGTCATGCCCAATGTTACAGATTTTCATTGCATCCTATCAGCAGGGTTTTGAGCATGGATCGCCTTAAAGATTTTCATTTGTTGCTAAGGTTTGCTTGGCATAAAAAATCCATCCAAATGCCTTTATATAGCTTAGATCAATGAATATTTTAGCTCATATTCCTAACTATTCAATTAAGGAGATATTGCGACATGCTTGTGTGGGGTTCATATGCGATGTTTATTTGGACCTTTTTTTTTTTCCTAATGCATGTATGATGTTTGGTGTTTGGTAGGTTTAGTTCCAAAAAAATGTATGTAGCAAAACTAATGGCACTTATATCTTATTTCCCTTGATTCAGTTGTTAAATTGCCCAATTTTCTATAAATATGCCATGTTTAATTTGTGTGTGTTCTTTTTGTAGGTTGTTAATCTTGAAGCATTGGGCAACGCAGCCACTTTCTTATCTATGTGTCATCTTTACCAAGTTACTGGTCCATGGAAGATTACAAAAT
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| CDS seq | ATGGCAACAATACTGGGTTCTTTGGTTGGATCATGCGTAAACAAGTTGCAAGGGATCATTACAGAGGAGGCAATACTAATTTTAGGTGTAAAAGATGAGCTTGAAGAACTGCAGCGAAGAACAGATCTCATAAGATATTCTCTTCAGGATGCTGAGGCAAGGAGGATGAAAGATTCTGCAGTTCAAAAATGGCTTGACCAGCTAAGAGATGTTATGTATGATGTTGATGATATTATTGATTTGGCTAGATTTAAAGGAAGTGTCCTACTACCTAACTATCCTATGTCATCGTCAAGGAAATCTACTGCTTGCAGTGGCCTTTCACTTTCATCCTGCTTTTCTAATATTCGTATACGTCATGAAGTTGCTGTAAAAATTAGAAGCCTCAACAAAAAGATAGATAACATTTCAAAGGATGATGTATTTTTAAAACTCAGCCGCACACAACATAATGGAAGTGGTTCAGCATGGACACCTATAGAAAGCTCCAGCCTAGTTGAACCTAACCTTGTGGGCAAGGAGGTCGTACATGCTTGCAGAGAAGTGGTGGATTTGGTGCTTGCACACAAGGCAAAGAATGTTTACAAGCTTGCTATTGTTGGAACAGGGGGAGTTGGCAAGACAACACTAGCTCAGAAAATATTCAATGATAAAAAATTACAAGGGAGATTTGACCATCGTGCCTGGGTTTGTGTCTCCAAGGAGTATTCTATGGTTTCCCTTTTGACACAAGTTCTTAGTAATATGAAAATTCATTATGAACAAAATGAATCAGTTGGGAACCTTCAAAGCAAACTCAAAGCAGGCATTGCAGACAAGAGTTTTTTCCTTGTGTTGGATGATGTATGGCACTATAAAGCATGGGAAGATTTACTAAGAACTCCACTAAATGCGGCAGCCACAGGAATAATTCTAGTAACTACTCGAGATGAAACTATTGCTCGTGTAATTGGGGTGGACCGGACTCATAGAGTTGATTTGATGTCAGCCGATGTAGGATGGGAGTTACTTTGGAGGAGCATGAACATCAAAGAAGAGAAACAAGTGAAAAATCTACGGGACACGGGTATCGAGATTGTCCGCAAATGTGGTGGCCTACCTCTTGCAATCAGGGCTATTGCCAAAGTCTTAGCAAGCCTGCAAGATCAAACAGAGAATGAGTGGAGACAGATATTGGGGAAAAATGCCTGGTCCATGAGCAAACTTCCTGATGAATTAAATGGTGCTTTATATCTGAGTTATGAAGTGCTGCCGCACCAGCTGAAGCAATGTTTTCTTTATTGTGCACTTTTCCCTGAAGATGCAACCATTTTCTGTGGTGATCTTACTAGGATGTGGGTGGCTGAAGGCTTTATAGATGAGCAAGAAGGCCAATTACTAGAAGACACAGCAGAGAGGTATTATCATGAGTTGATCCATCGGAACTTGCTCCAACCAGATGGTTTATATTTTGACCACAGCAGGTGCAAGATGCATGATCTCTTAAGGCAACTTGCTTCTTATTTGTCAAGAGAAGAATGTTTTGTTGGAGACCCAGAGTCACTAGGGACTAATACTATGTGCAAAGTACGACGTATTTCAGTTGTCACTGAGAAGGACATAGTGGTGTTACCTAGCATGGACAAGGATCAATATAAAGTGAGGTGTTTTACAAACTTATCTGGGAAGTCAGCAAGAATTGATAATTCACTTTTCAAGAGACTTGTATGTCTTCGCATTTTGGATTTGTCTGACTCACTTGTACATGACATCCCAGGTGCGATTGGAAATTTGATTTATCTGCGGTTGCTCGATCTTGACAGGACAAATATATGTTCTCTCCCAGAGGCCATTGGCTCCCTTCAAAGCCTTCAAATATTGAATTTGCAGGGGTGTGAATCTTTGCGCAGACTTCCTTTGGCAACAACTCAACTATGCAATTTGAGGCGGCTTGGTCTTGATGGTACTCCAATAAACCAGGTTCCAAAAGGGATAGGAAGACTGAAATTTCTCAATGATTTAGAAGGATTTCCTATCGGTGGTGGAAATGACAATACCAAAATACAAGATGGATGGAATTTGGAAGAGTTGGCTCATCTTTCACAGTTGAGGTGTCTTGATATGATAAAATTGGAGAGAGCTACTCCTTGCAGCAGTAGAGACCCATTTCTACTAACAGAGAAAAAGCATCTCAAAGTTCTGAATCTACACTGCACTGAACAGACAGATGAAGCATATTCAGAGGAAGGCATTAGCAATGTTGAGAAGATCTTTGAGAAGCTAGCACCTCCACACAACTTAGAAGATCTTGTTATTGGGAATTTCTTTGGGCGAAGGTTCCCCACCTGGCTTGGTACTAACCATTTGTCTTCAGTGAGATCCGTGATCCTCATAGATTGCAAATCTTGTGTGCATCTTCCCGCAATCGGACAGCTACCAAACTTGAAATACCTAAGAATTAATGGAGCAAGTGCAATCACCAAGATTGGACCCGAATTTGTTGGCTGCTGGGAGGGTAATCTTAGATCCACAGAGGCAGTTGCTTTCCCCAAGCTTGAAGTGTTGGTCATCAACGATATGCCCAACTGGGAGGAGTGGTCCTTTGTTGAAGAAGAAGAAGAGGTGCAGGAGGAGGAAGCATCTGCAGCAGCCAAGGAAGGGGGAGAGGATGGAACTGCTGCTTCGAAGCAAAAGGGGAAAGAAGCCCCGTCTCCAACTCTGAGGTCGTCGTGGCTGCTGCCTTGTTTGAAGGAGTTGTATCTTGAGGAGTGCCCCAAGCTGAGGGGTCTCCCACGACAGCTTAGACAGCAGGCCACCAACTTGAAGGACCTCCAATTAAGAGAAGCAGATTGCTTGAAGAAGATGGAAGACCTCCGGTTCCTCTGCTTCCTTTTAGTTGAAGGATGTGAAGGCCTGGAGAGGCTCTCCAACCTTCCCCAAGTGAGAGACCTGCGTGTAACACGTTGCCCAAATTTGAGGCATGTTGAGGAGTTGGGCGGTTTGGAGTGGCTATGGCTAGACGAGGGTATGCTGGAGATATCTCAGCTGTGGGTCCCTGGGCTTCAAGAGCAGCACCGCCAACTCCATGGAGACGAGCTCGAGATCAACGACTGGCCTCACACATAG
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| Protein seq | MATILGSLVGSCVNKLQGIITEEAILILGVKDELEELQRRTDLIRYSLQDAEARRMKDSAVQKWLDQLRDVMYDVDDIIDLARFKGSVLLPNYPMSSSRKSTACSGLSLSSCFSNIRIRHEVAVKIRSLNKKIDNISKDDVFLKLSRTQHNGSGSAWTPIESSSLVEPNLVGKEVVHACREVVDLVLAHKAKNVYKLAIVGTGGVGKTTLAQKIFNDKKLQGRFDHRAWVCVSKEYSMVSLLTQVLSNMKIHYEQNESVGNLQSKLKAGIADKSFFLVLDDVWHYKAWEDLLRTPLNAAATGIILVTTRDETIARVIGVDRTHRVDLMSADVGWELLWRSMNIKEEKQVKNLRDTGIEIVRKCGGLPLAIRAIAKVLASLQDQTENEWRQILGKNAWSMSKLPDELNGALYLSYEVLPHQLKQCFLYCALFPEDATIFCGDLTRMWVAEGFIDEQEGQLLEDTAERYYHELIHRNLLQPDGLYFDHSRCKMHDLLRQLASYLSREECFVGDPESLGTNTMCKVRRISVVTEKDIVVLPSMDKDQYKVRCFTNLSGKSARIDNSLFKRLVCLRILDLSDSLVHDIPGAIGNLIYLRLLDLDRTNICSLPEAIGSLQSLQILNLQGCESLRRLPLATTQLCNLRRLGLDGTPINQVPKGIGRLKFLNDLEGFPIGGGNDNTKIQDGWNLEELAHLSQLRCLDMIKLERATPCSSRDPFLLTEKKHLKVLNLHCTEQTDEAYSEEGISNVEKIFEKLAPPHNLEDLVIGNFFGRRFPTWLGTNHLSSVRSVILIDCKSCVHLPAIGQLPNLKYLRINGASAITKIGPEFVGCWEGNLRSTEAVAFPKLEVLVINDMPNWEEWSFVEEEEEVQEEEASAAAKEGGEDGTAASKQKGKEAPSPTLRSSWLLPCLKELYLEECPKLRGLPRQLRQQATNLKDLQLREADCLKKMEDLRFLCFLLVEGCEGLERLSNLPQVRDLRVTRCPNLRHVEELGGLEWLWLDEGMLEISQLWVPGLQEQHRQLHGDELEINDWPHT |
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| Function | Putative disease resistance protein RGA4 [UniProtKB/Swiss-Prot:Q7XA39] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsARC_11g0022930 | OsARC_11g0022930.01 | Chr11 | 27054364 | 27057468 | + | NAM | ||
| CDS seq | ATGGCAACAATACTGGGTTCTTTGGTTGGATCATGCGTAAACAAGTTGCAAGGGATCATTACAGAGGAGGCAATACTAATTTTAGGTGTAAAAGATGAGCTTGAAGAACTGCAGCGAAGAACAGATCTCATAAGATATTCTCTTCAGGATGCTGAGGCAAGGAGGATGAAAGATTCTGCAGTTCAAAAATGGCTTGACCAGCTAAGAGATGTTATGTATGATGTTGATGATATTATTGATTTGGCTAGATTTAAAGGAAGTGTCCTACTACCTAACTATCCTATGTCATCGTCAAGGAAATCTACTGCTTGCAGTGGCCTTTCACTTTCATCCTGCTTTTCTAATATTCGTATACGTCATGAAGTTGCTGTAAAAATTAGAAGCCTCAACAAAAAGATAGATAACATTTCAAAGGATGATGTATTTTTAAAACTCAGCCGCACACAACATAATGGAAGTGGTTCAGCATGGACACCTATAGAAAGCTCCAGCCTAGTTGAACCTAACCTTGTGGGCAAGGAGGTCGTACATGCTTGCAGAGAAGTGGTGGATTTGGTGCTTGCACACAAGGCAAAGAATGTTTACAAGCTTGCTATTGTTGGAACAGGGGGAGTTGGCAAGACAACACTAGCTCAGAAAATATTCAATGATAAAAAATTACAAGGGAGATTTGACCATCGTGCCTGGGTTTGTGTCTCCAAGGAGTATTCTATGGTTTCCCTTTTGACACAAGTTCTTAGTAATATGAAAATTCATTATGAACAAAATGAATCAGTTGGGAACCTTCAAAGCAAACTCAAAGCAGGCATTGCAGACAAGAGTTTTTTCCTTGTGTTGGATGATGTATGGCACTATAAAGCATGGGAAGATTTACTAAGAACTCCACTAAATGCGGCAGCCACAGGAATAATTCTAGTAACTACTCGAGATGAAACTATTGCTCGTGTAATTGGGGTGGACCGGACTCATAGAGTTGATTTGATGTCAGCCGATGTAGGATGGGAGTTACTTTGGAGGAGCATGAACATCAAAGAAGAGAAACAAGTGAAAAATCTACGGGACACGGGTATCGAGATTGTCCGCAAATGTGGTGGCCTACCTCTTGCAATCAGGGCTATTGCCAAAGTCTTAGCAAGCCTGCAAGATCAAACAGAGAATGAGTGGAGACAGATATTGGGGAAAAATGCCTGGTCCATGAGCAAACTTCCTGATGAATTAAATGGTGCTTTATATCTGAGTTATGAAGTGCTGCCGCACCAGCTGAAGCAATGTTTTCTTTATTGTGCACTTTTCCCTGAAGATGCAACCATTTTCTGTGGTGATCTTACTAGGATGTGGGTGGCTGAAGGCTTTATAGATGAGCAAGAAGGCCAATTACTAGAAGACACAGCAGAGAGGTATTATCATGAGTTGATCCATCGGAACTTGCTCCAACCAGATGGTTTATATTTTGACCACAGCAGGTGCAAGATGCATGATCTCTTAAGGCAACTTGCTTCTTATTTGTCAAGAGAAGAATGTTTTGTTGGAGACCCAGAGTCACTAGGGACTAATACTATGTGCAAAGTACGACGTATTTCAGTTGTCACTGAGAAGGACATAGTGGTGTTACCTAGCATGGACAAGGATCAATATAAAGTGAGGTGTTTTACAAACTTATCTGGGAAGTCAGCAAGAATTGATAATTCACTTTTCAAGAGACTTGTATGTCTTCGCATTTTGGATTTGTCTGACTCACTTGTACATGACATCCCAGGTGCGATTGGAAATTTGATTTATCTGCGGTTGCTCGATCTTGACAGGACAAATATATGTTCTCTCCCAGAGGCCATTGGCTCCCTTCAAAGCCTTCAAATATTGAATTTGCAGGGGTGTGAATCTTTGCGCAGACTTCCTTTGGCAACAACTCAACTATGCAATTTGAGGCGGCTTGGTCTTGATGGTACTCCAATAAACCAGGTTCCAAAAGGGATAGGAAGACTGAAATTTCTCAATGATTTAGAAGGATTTCCTATCGGTGGTGGAAATGACAATACCAAAATACAAGATGGATGGAATTTGGAAGAGTTGGCTCATCTTTCACAGTTGAGGTGTCTTGATATGATAAAATTGGAGAGAGCTACTCCTTGCAGCAGTAGAGACCCATTTCTACTAACAGAGAAAAAGCATCTCAAAGTTCTGAATCTACACTGCACTGAACAGACAGATGAAGCATATTCAGAGGAAGGCATTAGCAATGTTGAGAAGATCTTTGAGAAGCTAGCACCTCCACACAACTTAGAAGATCTTGTTATTGGGAATTTCTTTGGGCGAAGGTTCCCCACCTGGCTTGGTACTAACCATTTGTCTTCAGTGAGATCCGTGATCCTCATAGATTGCAAATCTTGTGTGCATCTTCCCGCAATCGGACAGCTACCAAACTTGAAATACCTAAGAATTAATGGAGCAAGTGCAATCACCAAGATTGGACCCGAATTTGTTGGCTGCTGGGAGGGTAATCTTAGATCCACAGAGGCAGTTGCTTTCCCCAAGCTTGAAGTGTTGGTCATCAACGATATGCCCAACTGGGAGGAGTGGTCCTTTGTTGAAGAAGAAGAAGAGGTGCAGGAGGAGGAAGCATCTGCAGCAGCCAAGGAAGGGGGAGAGGATGGAACTGCTGCTTCGAAGCAAAAGGGGAAAGAAGCCCCGTCTCCAACTCTGAGGTCGTCGTGGCTGCTGCCTTGTTTGAAGGAGTTGTATCTTGAGGAGTGCCCCAAGCTGAGGGGTCTCCCACGACAGCTTAGACAGCAGGCCACCAACTTGAAGGACCTCCAATTAAGAGAAGCAGATTGCTTGAAGAAGATGGAAGACCTCCGGTTCCTCTGCTTCCTTTTAGTTGAAGGATGTGAAGGCCTGGAGAGGCTCTCCAACCTTCCCCAAGTGAGAGACCTGCGTGTAACACGTTGCCCAAATTTGAGGCATGTTGAGGAGTTGGGCGGTTTGGAGTGGCTATGGCTAGACGAGGGTATGCTGGAGATATCTCAGCTGTGGGTCCCTGGGCTTCAAGAGCAGCACCGCCAACTCCATGGAGACGAGCTCGAGATCAACGACTGGCCTCACACATAG
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| Protein seq | MATILGSLVGSCVNKLQGIITEEAILILGVKDELEELQRRTDLIRYSLQDAEARRMKDSAVQKWLDQLRDVMYDVDDIIDLARFKGSVLLPNYPMSSSRKSTACSGLSLSSCFSNIRIRHEVAVKIRSLNKKIDNISKDDVFLKLSRTQHNGSGSAWTPIESSSLVEPNLVGKEVVHACREVVDLVLAHKAKNVYKLAIVGTGGVGKTTLAQKIFNDKKLQGRFDHRAWVCVSKEYSMVSLLTQVLSNMKIHYEQNESVGNLQSKLKAGIADKSFFLVLDDVWHYKAWEDLLRTPLNAAATGIILVTTRDETIARVIGVDRTHRVDLMSADVGWELLWRSMNIKEEKQVKNLRDTGIEIVRKCGGLPLAIRAIAKVLASLQDQTENEWRQILGKNAWSMSKLPDELNGALYLSYEVLPHQLKQCFLYCALFPEDATIFCGDLTRMWVAEGFIDEQEGQLLEDTAERYYHELIHRNLLQPDGLYFDHSRCKMHDLLRQLASYLSREECFVGDPESLGTNTMCKVRRISVVTEKDIVVLPSMDKDQYKVRCFTNLSGKSARIDNSLFKRLVCLRILDLSDSLVHDIPGAIGNLIYLRLLDLDRTNICSLPEAIGSLQSLQILNLQGCESLRRLPLATTQLCNLRRLGLDGTPINQVPKGIGRLKFLNDLEGFPIGGGNDNTKIQDGWNLEELAHLSQLRCLDMIKLERATPCSSRDPFLLTEKKHLKVLNLHCTEQTDEAYSEEGISNVEKIFEKLAPPHNLEDLVIGNFFGRRFPTWLGTNHLSSVRSVILIDCKSCVHLPAIGQLPNLKYLRINGASAITKIGPEFVGCWEGNLRSTEAVAFPKLEVLVINDMPNWEEWSFVEEEEEVQEEEASAAAKEGGEDGTAASKQKGKEAPSPTLRSSWLLPCLKELYLEECPKLRGLPRQLRQQATNLKDLQLREADCLKKMEDLRFLCFLLVEGCEGLERLSNLPQVRDLRVTRCPNLRHVEELGGLEWLWLDEGMLEISQLWVPGLQEQHRQLHGDELEINDWPHT
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsARC_11g0022930 | OsARC_11g0022930.02 | Chr11 | 27053265 | 27059000 | + | IsoSeq | ||
| CDS seq | ATGGAGCAAGTGCAATCACCAAGATTGGACCCGAATTTGTTGGCTGCTGGGAGGGTAATCTTAGATCCACAGAGGCAGTTGCTTTCCCCAAGCTTGAAGTGTTGGTCATCAACGATATGCCCAACTGGGAGGAGTGGTCCTTTGTTGAAGAAGAAGAAGAGGTGCAGGAGGAGGAAGCATCTGCAGCAGCCAAGGAAGGGGGAGAGGATGGAACTGCTGCTTCGAAGCAAAAGGGGAAAGAAGCCCCGTCTCCAA
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| Protein seq | MEQVQSPRLDPNLLAAGRVILDPQRQLLSPSLKCWSSTICPTGRSGPLLKKKKRCRRRKHLQQPRKGERMELLLRSKRGKKPRLQ |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.037749 | 0.227013 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0676100 | SBH | 1.142762 | 1.287942 | 1.539014 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g44960 | SBH | 0.100980 | 0.000000 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0676100 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0023750 | SBH | 0.000000 | 86.644440 | 2.468501 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0023530 | SBH | 0.000000 | 2.995102 | 0.126475 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0023140 | SBH | 2.762746 | 13.436707 | 26.538805 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0023140 | SBH | 0.000000 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0023130 | SBH | 0.0 | 2.865955 | 0.108137 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0416600 | SBH | 0.1248355 | 0.9264055 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0024070 | SBH | 0.147908 | 0.045435 | 1.028058 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0430000 | RBH | 0.0419675 | 0.0645025 | 0.058287 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0023740 | SBH | 0.024663 | 0.551611 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0023790 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0023280 | SBH | 2.088418 | 9.239458 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0023080 | SBH | 0.000000 | 0.0 | 0.239393 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0023080 | SBH | 0.133654 | 20.057241 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G023300 | SBH | 0.434635 | 0.913598 | 2.277780 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0023730 | SBH | 1.486182 | 20.188963 | 5.723283 |
