Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsKeNa_11g0023530 | OGI:11077650 | 16/16 | KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | Chr11:28382248-28393160 | ||||||||
| Gene Symbol | YR2, YR6, YR9, YR10, YR21, YR23, DRP-RP13, OsDRP-RP13, - | ||||||||||
| DNA seq | atggcaaccatattagattctttggttggatcatgtgccaataagttgaaagagattattactgaagaggtgatacttattctagggatacaagaagagctcgcagagttgcagcggaagactgaactcatacattgttgtattagtgatgctgaggcaaggaggatggaagagtcagcagttgacaattggcttggtcagctaagagaagttctatatgatgttgatgatattattgacttggctagatttaagggaagcattctactaactgatcatccttcatcgtcatcaaggaagtcaattgcttgcactggcctgtcaatttccacttgcttttctaatgttcaagcacgtcatgaggttgctgtgaagattagaagtctcaacaggaagatagaaaacatttcgaaggacagagtatttttgacactcaAGagtacggttcctactggaagcagttcagtattgagagtgagaaaaagttcccacctacttgagcccaacattgttggcaaggagatcatacatgcctgcagaaaaatggtagatttagtgcttgaacataaggggagaaaactttataagcttgcaattgttgggactgggggagttggtaagacaacattagctcagaaaatatacaatgatagaaaaataaaaggaagtttcaacaaaaaggcctgggtttgtgtttccaaagtgtactctgaagcttctcttttgagagaacttcttcgaattatggaagttcatcatgatcaagatgaatcaattggagagctccagagcaagcttgaaatagcaattaaggagacaagttttttccttgtgttggatgacatgtggcaatctgacgcatggacaaatttattaagaattccgttgcatgctgcagaaatgggagcaattctcataacaactagaaataatattgttgccttagaaatcggagtggaccatacttatcgagttgatttgatgtcaaccgacgtaggatgggagctactttggaagagcatgaatatcagtgaaagcatagaattgcaaactctgcaggatgttgggattgagattgttcgcaaatgtggttgccttcctcttgcaatcaaggttattgctagagtgttagcgagtaaagaacaaacagagaacgaatggaaaaaaatattgagcaaaaatgcttggttcatgaacaaccttccaaatgatttgagaggtgctttatatctgagttacgatgagttaccacgtcatctgaagcaatgctttctttattgtagtgtatatcctgaagatgcaaacatttaccgtgatgatcttacaaggatgtggatcgctgaaggctttatagaggaccatggaggtcaactactagaagaaacagcagacgagtattactatgagctgatccaccggaaccttcttcaaccagatggtttatattatgaccacagcagctgcaaaatgcatgatcttttaaggcagcttgcttgttatttgtcaagggaagaatgttttgttggaaacccagaatcattggtaggtaacactgtgtctaaacttcgacgtgtttcagtcgtcacagataagaacatggtaatgttacctagcatggacgaggtgcaatataaagtaaggacatggaaaacttcttatgagaaaacactcagagttgataattcatttttcaagagatttccttatcttcgtgttttagatttgactgattcatttgtaccaagcatcccaggttgcatcgggaatttgatccatctacgtttgcttgatcttgatggtaccaatgtatcttgtcttccagagtccattggcaacctgaaaaatcttcaaatattgaacttggagaggtgtgttgctttgcacagtcttccttcagcgatcacccaactgtgcaatttaaggcgccttggcctcaattattcaccgatatatcaagttccaaaagggattggcaaattggaatttctcaatgatgtagaagggtttccagtctatggtggcagtagtaatactaaaatgcaagatggatggaacttggaagaggcggcttcatatgattaaattggaaagagcagcttaccgcactacttacccattgttaacagacaaagggtttctgaaatttttgtatctatggtgtactgaacatacagatgaaccatacacagaaaaagatttcagcaatattgagaagatctttgagcagctaattccgccgtgcaacctggaagatcttgctattgttaaattcttcggtcgccagtatcccttctggatagattctacccatttggcttatgtaaaatccttgcatctcttcaactgcaaattctgtatgcaccttccaccagttgggcagctacccaacttgaaatatctaaaaattgagggagcagctgcagttaccattattggacccgaatttgctggccacagggcgagtaatcttggacgaacagttgctttccccaagcttgaagagttgctcattagagatatgcccaactgggaagagtggttctttattgatgaagcaacgtcaactgctaaggaaagggttgatgatggagattctgcaatgccaaaagagaaagccttacctccaaggatgcagatactatcacggttgaggaggctggaactttctggctgcccaaagctgaaagctcttccacggcagcttgcacagattaacagtctgaacgagatagagctaagatgggcaagcagcctgaaggtggtggagaacttccccctcctctctgaaatgcttttgattgcgacatgtcaagccctggagaaagtctctaaccttcctcaactgcgagagctgcgcgtgcaagattgtccaaacttgagacttgttgaggatttgagcactttggagcagttgtggctttatgaggatatgcatgaggtctctacattgtgagtgcctgggcttcaacagcagtgccggcaacatcatggagaggatcttgatgtctacaattggacatagtaataatgtatggatgcccaaaattatttggacgcttcagttgtttgatgcaaggtatgtgattttatatactctggattcagattgcgcccattttttggcgtgctactgtgtacatagatatatattttttgctttactagttctcggtcttgaggatgaaaggatctagtactttgtaatatcggatattacagatatgacaataatcccaaagatatggcagtataagaactaaaaaactgtacttctagtttgttctggtaatcttctattaggttctgcaacttccatgcagctcattatcagcacatcgaccttctactgagcaggaatgaatgaatggatcaatgggtagatggtaggagtaccagactgactgtgtgtatattcagcaaatttagtctccctgatgtttacagcctaccttaactgaatttcacatcagcaatgattgcgtgcaaggccctttttcctccaccagatgatgcttaaggaccacaaaatacatgtatatctcgatgaaccgaaaataaaagcattccctccattatccaacatcgttttttatcgagtccatccttctccatttaaacactgaacagaacagcttgttactctgtcatcaggagagatattatgaccaatacccccaggttttccccttgttattccgtattgttgaattaactgtagttttgatgcattcatgtgttatgcagggggatgctgatcagtgccccttttggatacttcaaccttcctaatgttccatgtaagctgttttcctaatttctcccattgtaatctgctctactagcaatggcttatctgctgcatctcctgtacaggattcagaactcaagttcttgccgcaaaatggtttctgtacacacaaaaatggctaaaatttcaaatgccaactgcgattaacagcagattgagttgctgatggaggtgaaaactcactatgctttagagttcgctcccaaatcatcaaccctcttatatggactccgaaatcagaatctgagttttgtgttcagttatttcagttcagtgatctagtttcatctcaactgttccgagtaattaacaactggagtagaaattatccttcccctgaactgaatcacaaatgcatcgcaaagcaatcaaagctgtggcgaaattcatctatccagcgacgagaagagaggaagggagggaggcgtcacgtacctgggttgaactcgaggaagaggaagaggccgcgccgtcgaccccgggcgccgtggcggcgaaggggcccatggagcgctccaacttctccaccctcggatctctgtcgctccctgcggcccaccctccagctccgcctccgcctctgctccccggcgccatcaacgaggtggggggttggacggccgtaccaggcgctccacgatgtacctcactcactgactcatcggagaactcgcccagtcgcccgcagcaatggtagctcccttctccaccatcaacctcgccactcgtcggagcgccgccgtcgccgtcggcgaccaacgcgcccttttccaacgacaatacgagataatctgagggcttattccaaaatgatcctccaatgctcaggcgcccttagatatcccggcccattaattagggcccacacgtcatccgcaaaccccttgatggcccataaaatatgggccccacgttgcatcccgcccatgttcacttgcagcacgttgggctgtgaaagggtccaaagtccaagtatcgccccagagacggcccgtacactttgggcctcacattgctcctgccctgttctgacgggccgcatgtccccgtagtatcgtcccggcccacaaattaaatggaatcgcttgctggcctacgcccattagtcggcccgaccgcaagagcgatagtctcctggatgatagaatccgccgccatggcagccgctcgccggagctctgccgactggccacggagctcctctccggcgaagatttgcatcacgtaggttcttcgagtcttccctttccataatgtgctttggctctttcatcttcctctctctgtctcacagatcagacaagtgcaaatgagagatgctgtactgctgagtaagcttcagatactgttgtgttaccaaaaattatcccgggaaaccaacacttgacgagcatgtcaatacctattgatgagagatgttgtatgtactgctgtttaagctatagaacctattgatgttatacagatctgagtacatttttttttctttgataatgtcaggtgtgagctcatgaaactgggattgtgtttagttcgtagcatcctcttctttcattctttggagtgaatcaatgatcctgttgaagtcaccaattggatgctttgttctctatgttctgcttctgtagctggatgagtatcagtcactgtatctgaacacatacagagtgaactctatggtttcagagcaggtatgttccttctttgacatggtcatcaatctgaaagcatgtcctccactagcatgtgcagtagtatgattccatgatggaggaaacaaaacttaatcatgtgcacgtctttctttttcttttctaatcaaagtgcgcgcctgctttaacaccatggactataatattcacgtaaactaattataatcatatcaccaagtacgtccagtgcgcttcatgcagccacggggaagctgccttcttccaggtcaggattgtcgatcagagccaaaccaagcagtttgttcagagttcagaattacatagaaactactgaaatctgaatgctgaaaatgattttgttgttgcatgcaggcacagcgaggggaaaggaaggcatgacacttatcttcgtgtgctgcaaccccagctgcaatcacagatggagggagtgacatgtaaattaattgtaattaatgctactattatgctgcatgtaaaggcaatagagctttgcattatgccatgaattggtatatgtttactagtcaaatcgagggataagacgacaaacaatgagtatgagatgccattgagcccgtgacggaggaaacaaaactcaagcatgtgtatgctcacccctttgtaaaggcaataaagcacgaagctggtttcacatcatggaatcttggaagcaaactctaaattaatcacatcgaaataaactgtaaactaatcacatcgccagagcccaggcgccagctaatcgtagcaatataccattgcatctgttgttcagtgccctagaataggtgagtgtagctgatagaagtacgaaaacgcaaagttccctactaatctgtaaggtctattagtaggaattaagtactctctcaggagcctcaccatttgcattctaacaaacctaacgttttgacaaagaccattgcgtttccatggtgttactagaacaattgcttcagcgctagtgtgcaggaaatcaattaccattagtgatgattggggatatgaataagaaaaggagtagccatagctaactatacggttcatgaatatacacaaaatgttgggttgtgcagcatagacaagtggacaattacttaaaatttggtcagtgatagtaccatgggaaagataaaagaaaagagagtggttcagcagttgtctagctagtctgaatgttcagctatacaatatatgtaaggccttaccacctttcctaaatcactccctagcctcctgcagtactgttgctttgttccactgtgtcgcattcttacactgcatttctaccggctgtgggtaagctcaatacatatagctgaatttacttcctttatttccttaagttaatccgtaaatgctcatcttgactgcagggcacggattttcaacaggatcagttgcgtccatttctgtctgctttctgattgattgagatgagatctactaggaaggaaaaatctgcttcatctgagtaatcccatatatactgctcttcttgaagcactccttgatcggtgaatgtcaacacatgaaccagtatttctggtactctccgttgattcttctagttaaccttctgaatcatttcagttgtacatatataatacacacttcacttttcttctgtcccctttttgcaattgtagcagtgcagtctgcggttctctcttgatgactggctcataatgttctgaaatctattctatactctggcttattcaatcagattcctttggtcttgattaatcttaagtacaagatgggaccgagcaacctgttaacctgtgcaagatggttgctactatactactgatccttgttatgtaccatatgttatttttgtgctgaatgatcgctctgtaaggtaagatttgcatcccggcgaaaacgaaaaaagatttgcatgtgtacttcaagtttcgaatgcatcattctgtgatctttttttgggatgcagctagtagagtagtaggtagggaggtgtatccgccatgcaacttttaggttttcatgtgtgaagctacctaaataatatagaccctgtttggatgcttgggctgtggttacataaccataaatgtcaattttgctagccattagactcaacatgcacggtacaccgaattaagtggaaactcttatacaaagaatagatggataatatatttactaaacttcatcttgcattcatattttgtcagccttatctaacttttaaactatgttaacacaagtttggttacatgtcaggctgcaTtttttacattgatcaattatatatggtggattaccccttttgagtttgtcggatggcaacaatagtagacacattggttggatcatgcatcaataagttgcaagcgatcattacagacaagacaatactcattttaggggtaaaagatgagcttgaagaactgcaacgaagaacaaacgtcataagatcctctcttcaggatgctgaggcaaggaggatggaagatttagtagttgaaaaatggcttgaccagctaagagatgttatgtatgatgttgatgatattattgatttggctagatttaaaggaagtgtcctactgcctgactatcctatgtcatcgtcaaggaaatcaactgcttgcagtggcctttcactttcatcctgcttttctaatattcgtatacgtcatgaagttgctgtaaaaattagaagcctgaacaaaaagatcgataacatttcaaaggatgaggtatttttaaaactcaaccgcagacatcataatggaagtggttcagcatggacaccaatagaaagctccagcctagttgaacccaaccttgtgggcaaggaggtcatacgtgcttgcagagaagtggtggatttggtgcttgcacacaagaaaaagaatgtttacaagcttgctattgttggaacaggaggagttggtaagacaacactagctcagaaaatattcaatgataaaaaattagaagggagatttgaccatcatgcatgggcttgtgtttccaaggagTATTCtagggattctcttttgagacaagttcttcgtaatatgggaattcgatatgagcaagatgaatcagttccagagctccaaagaaagattaaatcacacattgcaaataaaagtttttttctggtgttggatgatgtgtggaactctgaagcatggacagatttactaagcactccacttcatgcagccaccacaggagtaattctaataactactcgagatgacactattgctagagtaattggggtggaccacactcatagggttgatttgatgtcagctgatgtaggatgggagctgctttggaggagcatgaacatcaaccatgagaaacaagtgcaaaatctcaaggacataggtattgagattgttcgcaaatgtggtggccttcctcttgcaatcagagttattgctacagttttagcaagccaagaacaaacagagaatgaatggagacggatattggggaaaaatgcctggtccatgagcaaacttcctcatgaattaagtggtgctttatatctgagttatgaagtgctgccgcaccaactgaagcaatgttttctttattgtgcacttttccctgaagatgcaaccatttggcgtgacgatcttactaggatgtgggttgctgaaggctttatagatgaggaaaaaggacaattactagaagatacagcagagagatattattatgagctgatccatcggaacttgctccaaccagatggtttatattttgaccacagcaggtgcaagatgcatgatctcttaaggcaacttgcttcttatttgtcaagagaagaatgttttgttggagacccagagtcactagggactaatactatgtgcaaagtacggcgtatttcagttgtcactgagaaggacatagtggtgttacctagcatggacaaggatcaatataaagtgaggtgttttacaaacttatctgggaagtcagcaagaattgataattcacttttcaagagacttgtatgtcttcgcattttggatttgtctgacgcacttgtacatgacatcccaggtgcgattggaaatttgatttatctgcggttgctcgatcttgacaggacaaatatatgttctctcccagaggccattggttccctgcaaaaccttcaaatattgaacttgcaggggtgtgaatctttgcgcagacttcctttggcaacaactcaactatgcaatttgaggcgacttggtctttatggtacaccaataaaccaggtcccaaaagggataggaagactgaaatttctcaatgatttagaaggatttcctatcggtggtggaaatgacagtaccaaaatacaagatggatggaatttggaagagttgggtcatcttccacagttgaggcatcttggtatgataaaattggaaagaggtactccacgcagcagtacagacccatttctactaacagagaaaaagcatctcaaagttctgagtctacactgcactgaacagacagatgaagcatatttagaggaaaatgctagaaacattgaaaagatcttcgagaagctaacacctccgcacaacttagaaaagcttgttattgtgaatttctttggttgtagattccccacctggcttggtactgcccatttgcctttaatgaaatctgtgaccctcgtatattgcaaatcttgtgtgcatcttccatcaatcagacagctaccaaacttgaaatacctaagaattgagggagcaagtgcaatcaccaagattggacccgaatttgttggctgctgggagggtaatctcagatccacagaggcagttgctttccccaagcttgaagcgttggtcattgaggatatgcccaactgggaggagtggtcctttgttgaagaagaagtgcaggaggaggaagcagctgcagcagccaaggaagggagagaggatggaactgctgcttcgaagcaaaagggggaggaagccccgtctccaactccaaggccgtcatggctgctgccttgtttgacgaggttggatctcgtgggctgccccaagctgagggctctcccaccacagcttggacagcaggccaccaacttgaaggacatccttataagagaagcagaatgcttgaagacggtggaagacctcccgttcctctctggtgccctttcaattggtggctgtgaaggcctggagagggtctccaaccttccccaagtgagagagctgtttctaaatgaatgcccgaatttgaggcatgtcgaggagttgggtggtttggagcagctatggctgtcaaagaatatgcagaagatctcttcactgtgggtcccaaggcttcaggagcaacaccgccagctccatggagatgagcatgagctggaggtcaccgagtggctctga
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| CDS seq | atggcaaccatattagattctttggttggatcatgtgccaataagttgaaagagattattactgaagaggtgatacttattctagggatacaagaagagctcgcagagttgcagcggaagactgaactcatacattgttgtattagtgatgctgaggcaaggaggatggaagagtcagcagttgacaattggcttggtcagctaagagaagttctatatgatgttgatgatattattgacttggctagatttaagggaagcattctactaactgatcatccttcatcgtcatcaaggaagtcaattgcttgcactggcctgtcaatttccacttgcttttctaatgttcaagcacgtcatgaggttgctgtgaagattagaagtctcaacaggaagatagaaaacatttcgaaggacagagtatttttgacactcaAGagtacggttcctactggaagcagttcagtattgagagtgagaaaaagttcccacctacttgagcccaacattgttggcaaggagatcatacatgcctgcagaaaaatggtagatttagtgcttgaacataaggggagaaaactttataagcttgcaattgttgggactgggggagttggtaagacaacattagctcagaaaatatacaatgatagaaaaataaaaggaagtttcaacaaaaaggcctgggtttgtgtttccaaagtgtactctgaagcttctcttttgagagaacttcttcgaattatggaagttcatcatgatcaagatgaatcaattggagagctccagagcaagcttgaaatagcaattaaggagacaagttttttccttgtgttggatgacatgtggcaatctgacgcatggacaaatttattaagaattccgttgcatgctgcagaaatgggagcaattctcataacaactagaaataatattgttgccttagaaatcggagtggaccatacttatcgagttgatttgatgtcaaccgacgtaggatgggagctactttggaagagcatgaatatcagtgaaagcatagaattgcaaactctgcaggatgttgggattgagattgttcgcaaatgtggttgccttcctcttgcaatcaaggttattgctagagtgttagcgagtaaagaacaaacagagaacgaatggaaaaaaatattgagcaaaaatgcttggttcatgaacaaccttccaaatgatttgagaggtgctttatatctgagttacgatgagttaccacgtcatctgaagcaatgctttctttattgtagtgtatatcctgaagatgcaaacatttaccgtgatgatcttacaaggatgtggatcgctgaaggctttatagaggaccatggaggtcaactactagaagaaacagcagacgagtattactatgagctgatccaccggaaccttcttcaaccagatggtttatattatgaccacagcagctgcaaaatgcatgatcttttaaggcagcttgcttgttatttgtcaagggaagaatgttttgttggaaacccagaatcattggtaggtaacactgtgtctaaacttcgacgtgtttcagtcgtcacagataagaacatggtaatgttacctagcatggacgaggtgcaatataaagtaaggacatggaaaacttcttatgagaaaacactcagagttgataattcatttttcaagagatttccttatcttcgtgttttagatttgactgattcatttgtaccaagcatcccaggttgcatcgggaatttgatccatctacgtttgcttgatcttgatggtaccaatgtatcttgtcttccagagtccattggcaacctgaaaaatcttcaaatattgaacttggagaggtgtgttgctttgcacagtcttccttcagcgatcacccaactgtgcaatttaaggcgccttggcctcaattattcaccgatatatcaagttccaaaagggattggcaaattggaatttctcaatgatgtagaagggtttccagtctatggtggcagtaatgaaccatacacagaaaaagatttcagcaatattgagaagatctttgagcagctaattccgccgtgcaacctggaagatcttgctattgttaaattcttcggtcgccagtatcccttctggatagattctacccatttggcttatgtaaaatccttgcatctcttcaactgcaaattctgtatgcaccttccaccagttgggcagctacccaacttgaaatatctaaaaattgagggagcagctgcagttaccattattggacccgaatttgctggccacagggcgagtaatcttggacgaacagttgctttccccaagcttgaagagttgctcattagagatatgcccaactgggaagagtggttctttattgatgaagcaacgtcaactgctaaggaaagggttgatgatggagattctgcaatgccaaaagagaaagccttacctccaaggatgcagatactatcacggttgaggaggctggaactttctggctgcccaaagctgaaagctcttccacggcagcttgcacagattaacagtctgaacgagatagagctaagatgggcaagcagcctgaaggtggtggagaacttccccctcctctctgaaatgcttttgattgcgacatgtcaagccctggagaaagtctctaaccttcctcaactgcgagagctgcgcgtgcaagattgtccaaacttgagacttgttgaggatttgagcactttggagcagttgtggctttatgaggatatgcatgaggtctctacattggggatgctgatcagtgccccttttggatacttcaaccttcctaatgttccatcaatcaaagctgtggcgaaattcatctatccagcgacgagaagagaggaagggagggaggcgtcacgtacctgggttgaactcgaggaagaggaagaggccgcgccgtcgaccccgggcgccgtggcggcgaaggggcccatggagcgctccaacttctccaccctcggatctctgtcgctccctgcggcccaccctccagctccgcctccgcctctgctccccggcgccatcaacgaggtggggggttggacggccgtaccaggcgctccacgatatcagacaagtgcaaatgagagatgctgtactgctgagcacagcgaggggaaaggaaggcatgacacttatcttcgtgtgctgcaaccccagctgcaatcacagatggagggagtgacatgggtaaaagatgagcttgaagaactgcaacgaagaacaaacgtcataagatcctctcttcaggatgctgaggcaaggaggatggaagatttagtagttgaaaaatggcttgaccagctaagagatgttatgtatgatgttgatgatattattgatttggctagatttaaaggaagtgtcctactgcctgactatcctatgtcatcgtcaaggaaatcaactgcttgcagtggcctttcactttcatcctgcttttctaatattcgtatacgtcatgaagttgctgtaaaaattagaagcctgaacaaaaagatcgataacatttcaaaggatgaggtatttttaaaactcaaccgcagacatcataatggaagtggttcagcatggacaccaatagaaagctccagcctagttgaacccaaccttgtgggcaaggaggtcatacgtgcttgcagagaagtggtggatttggtgcttgcacacaagaaaaagaatgtttacaagcttgctattgttggaacaggaggagttggtaagacaacactagctcagaaaatattcaatgataaaaaattagaagggagatttgaccatcatgcatgggcttgtgtttccaaggagTATTCtagggattctcttttgagacaagttcttcgtaatatgggaattcgatatgagcaagatgaatcagttccagagctccaaagaaagattaaatcacacattgcaaataaaagtttttttctggtgttggatgatgtgtggaactctgaagcatggacagatttactaagcactccacttcatgcagccaccacaggagtaattctaataactactcgagatgacactattgctagagtaattggggtggaccacactcatagggttgatttgatgtcagctgatgtaggatgggagctgctttggaggagcatgaacatcaaccatgagaaacaagtgcaaaatctcaaggacataggtattgagattgttcgcaaatgtggtggccttcctcttgcaatcagagttattgctacagttttagcaagccaagaacaaacagagaatgaatggagacggatattggggaaaaatgcctggtccatgagcaaacttcctcatgaattaagtggtgctttatatctgagttatgaagtgctgccgcaccaactgaagcaatgttttctttattgtgcacttttccctgaagatgcaaccatttggcgtgacgatcttactaggatgtgggttgctgaaggctttatagatgaggaaaaaggacaattactagaagatacagcagagagatattattatgagctgatccatcggaacttgctccaaccagatggtttatattttgaccacagcaggtgcaagatgcatgatctcttaaggcaacttgcttcttatttgtcaagagaagaatgttttgttggagacccagagtcactagggactaatactatgtgcaaagtacggcgtatttcagttgtcactgagaaggacatagtggtgttacctagcatggacaaggatcaatataaagtgaggtgttttacaaacttatctgggaagtcagcaagaattgataattcacttttcaagagacttgtatgtcttcgcattttggatttgtctgacgcacttgtacatgacatcccaggtgcgattggaaatttgatttatctgcggttgctcgatcttgacaggacaaatatatgttctctcccagaggccattggttccctgcaaaaccttcaaatattgaacttgcaggggtgtgaatctttgcgcagacttcctttggcaacaactcaactatgcaatttgaggcgacttggtctttatggtacaccaataaaccaggtcccaaaagggataggaagactgaaatttctcaatgatttagaaggatttcctatcggtggtggaaatgacagtaccaaaatacaagatggatggaatttggaagagttgggtcatcttccacagttgaggcatcttggtatgataaaattggaaagagatgaagcatatttagaggaaaatgctagaaacattgaaaagatcttcgagaagctaacacctccgcacaacttagaaaagcttgttattgtgaatttctttggttgtagattccccacctggcttggtactgcccatttgcctttaatgaaatctgtgaccctcgtatattgcaaatcttgtgtgcatcttccatcaatcagacagctaccaaacttgaaatacctaagaattgagggagcaagtgcaatcaccaagattggacccgaatttgttggctgctgggagggtaatctcagatccacagaggcagttgctttccccaagcttgaagcgttggtcattgaggatatgcccaactgggaggagtggtcctttgttgaagaagaagtgcaggaggaggaagcagctgcagcagccaaggaagggagagaggatggaactgctgcttcgaagcaaaagggggaggaagccccgtctccaactccaaggccgtcatggctgctgccttgtttgacgaggttggatctcgtgggctgccccaagctgagggctctcccaccacagcttggacagcaggccaccaacttgaaggacatccttataagagaagcagaatgcttgaagacggtggaagacctcccgttcctctctggtgccctttcaattggtggctgtgaaggcctggagagggtctccaaccttccccaagtgagagagctgtttctaaatgaatgcccgaatttgaggcatgtcgaggagttgggtggtttggagcagctatggctgtcaaagaatatgcagaagatctcttcactgtgggtcccaaggcttcaggagcaacaccgccagctccatggagatgagcatgagctggaggtcaccgagtggctctga
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| Protein seq | MATILDSLVGSCANKLKEIITEEVILILGIQEELAELQRKTELIHCCISDAEARRMEESAVDNWLGQLREVLYDVDDIIDLARFKGSILLTDHPSSSSRKSIACTGLSISTCFSNVQARHEVAVKIRSLNRKIENISKDRVFLTLKSTVPTGSSSVLRVRKSSHLLEPNIVGKEIIHACRKMVDLVLEHKGRKLYKLAIVGTGGVGKTTLAQKIYNDRKIKGSFNKKAWVCVSKVYSEASLLRELLRIMEVHHDQDESIGELQSKLEIAIKETSFFLVLDDMWQSDAWTNLLRIPLHAAEMGAILITTRNNIVALEIGVDHTYRVDLMSTDVGWELLWKSMNISESIELQTLQDVGIEIVRKCGCLPLAIKVIARVLASKEQTENEWKKILSKNAWFMNNLPNDLRGALYLSYDELPRHLKQCFLYCSVYPEDANIYRDDLTRMWIAEGFIEDHGGQLLEETADEYYYELIHRNLLQPDGLYYDHSSCKMHDLLRQLACYLSREECFVGNPESLVGNTVSKLRRVSVVTDKNMVMLPSMDEVQYKVRTWKTSYEKTLRVDNSFFKRFPYLRVLDLTDSFVPSIPGCIGNLIHLRLLDLDGTNVSCLPESIGNLKNLQILNLERCVALHSLPSAITQLCNLRRLGLNYSPIYQVPKGIGKLEFLNDVEGFPVYGGSNEPYTEKDFSNIEKIFEQLIPPCNLEDLAIVKFFGRQYPFWIDSTHLAYVKSLHLFNCKFCMHLPPVGQLPNLKYLKIEGAAAVTIIGPEFAGHRASNLGRTVAFPKLEELLIRDMPNWEEWFFIDEATSTAKERVDDGDSAMPKEKALPPRMQILSRLRRLELSGCPKLKALPRQLAQINSLNEIELRWASSLKVVENFPLLSEMLLIATCQALEKVSNLPQLRELRVQDCPNLRLVEDLSTLEQLWLYEDMHEVSTLGMLISAPFGYFNLPNVPSIKAVAKFIYPATRREEGREASRTWVELEEEEEAAPSTPGAVAAKGPMERSNFSTLGSLSLPAAHPPAPPPPLLPGAINEVGGWTAVPGAPRYQTSANERCCTAEHSEGKGRHDTYLRVLQPQLQSQMEGVTWVKDELEELQRRTNVIRSSLQDAEARRMEDLVVEKWLDQLRDVMYDVDDIIDLARFKGSVLLPDYPMSSSRKSTACSGLSLSSCFSNIRIRHEVAVKIRSLNKKIDNISKDEVFLKLNRRHHNGSGSAWTPIESSSLVEPNLVGKEVIRACREVVDLVLAHKKKNVYKLAIVGTGGVGKTTLAQKIFNDKKLEGRFDHHAWACVSKEYSRDSLLRQVLRNMGIRYEQDESVPELQRKIKSHIANKSFFLVLDDVWNSEAWTDLLSTPLHAATTGVILITTRDDTIARVIGVDHTHRVDLMSADVGWELLWRSMNINHEKQVQNLKDIGIEIVRKCGGLPLAIRVIATVLASQEQTENEWRRILGKNAWSMSKLPHELSGALYLSYEVLPHQLKQCFLYCALFPEDATIWRDDLTRMWVAEGFIDEEKGQLLEDTAERYYYELIHRNLLQPDGLYFDHSRCKMHDLLRQLASYLSREECFVGDPESLGTNTMCKVRRISVVTEKDIVVLPSMDKDQYKVRCFTNLSGKSARIDNSLFKRLVCLRILDLSDALVHDIPGAIGNLIYLRLLDLDRTNICSLPEAIGSLQNLQILNLQGCESLRRLPLATTQLCNLRRLGLYGTPINQVPKGIGRLKFLNDLEGFPIGGGNDSTKIQDGWNLEELGHLPQLRHLGMIKLERDEAYLEENARNIEKIFEKLTPPHNLEKLVIVNFFGCRFPTWLGTAHLPLMKSVTLVYCKSCVHLPSIRQLPNLKYLRIEGASAITKIGPEFVGCWEGNLRSTEAVAFPKLEALVIEDMPNWEEWSFVEEEVQEEEAAAAAKEGREDGTAASKQKGEEAPSPTPRPSWLLPCLTRLDLVGCPKLRALPPQLGQQATNLKDILIREAECLKTVEDLPFLSGALSIGGCEGLERVSNLPQVRELFLNECPNLRHVEELGGLEQLWLSKNMQKISSLWVPRLQEQHRQLHGDEHELEVTEWL |
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| Function | Putative disease resistance protein RGA3 [UniProtKB/Swiss-Prot:Q7XA40] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_11g0023530 | OsKeNa_11g0023530.01 | Chr11 | 28382248 | 28393160 | + | NAM | ||
| CDS seq | atggcaaccatattagattctttggttggatcatgtgccaataagttgaaagagattattactgaagaggtgatacttattctagggatacaagaagagctcgcagagttgcagcggaagactgaactcatacattgttgtattagtgatgctgaggcaaggaggatggaagagtcagcagttgacaattggcttggtcagctaagagaagttctatatgatgttgatgatattattgacttggctagatttaagggaagcattctactaactgatcatccttcatcgtcatcaaggaagtcaattgcttgcactggcctgtcaatttccacttgcttttctaatgttcaagcacgtcatgaggttgctgtgaagattagaagtctcaacaggaagatagaaaacatttcgaaggacagagtatttttgacactcaAGagtacggttcctactggaagcagttcagtattgagagtgagaaaaagttcccacctacttgagcccaacattgttggcaaggagatcatacatgcctgcagaaaaatggtagatttagtgcttgaacataaggggagaaaactttataagcttgcaattgttgggactgggggagttggtaagacaacattagctcagaaaatatacaatgatagaaaaataaaaggaagtttcaacaaaaaggcctgggtttgtgtttccaaagtgtactctgaagcttctcttttgagagaacttcttcgaattatggaagttcatcatgatcaagatgaatcaattggagagctccagagcaagcttgaaatagcaattaaggagacaagttttttccttgtgttggatgacatgtggcaatctgacgcatggacaaatttattaagaattccgttgcatgctgcagaaatgggagcaattctcataacaactagaaataatattgttgccttagaaatcggagtggaccatacttatcgagttgatttgatgtcaaccgacgtaggatgggagctactttggaagagcatgaatatcagtgaaagcatagaattgcaaactctgcaggatgttgggattgagattgttcgcaaatgtggttgccttcctcttgcaatcaaggttattgctagagtgttagcgagtaaagaacaaacagagaacgaatggaaaaaaatattgagcaaaaatgcttggttcatgaacaaccttccaaatgatttgagaggtgctttatatctgagttacgatgagttaccacgtcatctgaagcaatgctttctttattgtagtgtatatcctgaagatgcaaacatttaccgtgatgatcttacaaggatgtggatcgctgaaggctttatagaggaccatggaggtcaactactagaagaaacagcagacgagtattactatgagctgatccaccggaaccttcttcaaccagatggtttatattatgaccacagcagctgcaaaatgcatgatcttttaaggcagcttgcttgttatttgtcaagggaagaatgttttgttggaaacccagaatcattggtaggtaacactgtgtctaaacttcgacgtgtttcagtcgtcacagataagaacatggtaatgttacctagcatggacgaggtgcaatataaagtaaggacatggaaaacttcttatgagaaaacactcagagttgataattcatttttcaagagatttccttatcttcgtgttttagatttgactgattcatttgtaccaagcatcccaggttgcatcgggaatttgatccatctacgtttgcttgatcttgatggtaccaatgtatcttgtcttccagagtccattggcaacctgaaaaatcttcaaatattgaacttggagaggtgtgttgctttgcacagtcttccttcagcgatcacccaactgtgcaatttaaggcgccttggcctcaattattcaccgatatatcaagttccaaaagggattggcaaattggaatttctcaatgatgtagaagggtttccagtctatggtggcagtaatgaaccatacacagaaaaagatttcagcaatattgagaagatctttgagcagctaattccgccgtgcaacctggaagatcttgctattgttaaattcttcggtcgccagtatcccttctggatagattctacccatttggcttatgtaaaatccttgcatctcttcaactgcaaattctgtatgcaccttccaccagttgggcagctacccaacttgaaatatctaaaaattgagggagcagctgcagttaccattattggacccgaatttgctggccacagggcgagtaatcttggacgaacagttgctttccccaagcttgaagagttgctcattagagatatgcccaactgggaagagtggttctttattgatgaagcaacgtcaactgctaaggaaagggttgatgatggagattctgcaatgccaaaagagaaagccttacctccaaggatgcagatactatcacggttgaggaggctggaactttctggctgcccaaagctgaaagctcttccacggcagcttgcacagattaacagtctgaacgagatagagctaagatgggcaagcagcctgaaggtggtggagaacttccccctcctctctgaaatgcttttgattgcgacatgtcaagccctggagaaagtctctaaccttcctcaactgcgagagctgcgcgtgcaagattgtccaaacttgagacttgttgaggatttgagcactttggagcagttgtggctttatgaggatatgcatgaggtctctacattggggatgctgatcagtgccccttttggatacttcaaccttcctaatgttccatcaatcaaagctgtggcgaaattcatctatccagcgacgagaagagaggaagggagggaggcgtcacgtacctgggttgaactcgaggaagaggaagaggccgcgccgtcgaccccgggcgccgtggcggcgaaggggcccatggagcgctccaacttctccaccctcggatctctgtcgctccctgcggcccaccctccagctccgcctccgcctctgctccccggcgccatcaacgaggtggggggttggacggccgtaccaggcgctccacgatatcagacaagtgcaaatgagagatgctgtactgctgagcacagcgaggggaaaggaaggcatgacacttatcttcgtgtgctgcaaccccagctgcaatcacagatggagggagtgacatgggtaaaagatgagcttgaagaactgcaacgaagaacaaacgtcataagatcctctcttcaggatgctgaggcaaggaggatggaagatttagtagttgaaaaatggcttgaccagctaagagatgttatgtatgatgttgatgatattattgatttggctagatttaaaggaagtgtcctactgcctgactatcctatgtcatcgtcaaggaaatcaactgcttgcagtggcctttcactttcatcctgcttttctaatattcgtatacgtcatgaagttgctgtaaaaattagaagcctgaacaaaaagatcgataacatttcaaaggatgaggtatttttaaaactcaaccgcagacatcataatggaagtggttcagcatggacaccaatagaaagctccagcctagttgaacccaaccttgtgggcaaggaggtcatacgtgcttgcagagaagtggtggatttggtgcttgcacacaagaaaaagaatgtttacaagcttgctattgttggaacaggaggagttggtaagacaacactagctcagaaaatattcaatgataaaaaattagaagggagatttgaccatcatgcatgggcttgtgtttccaaggagTATTCtagggattctcttttgagacaagttcttcgtaatatgggaattcgatatgagcaagatgaatcagttccagagctccaaagaaagattaaatcacacattgcaaataaaagtttttttctggtgttggatgatgtgtggaactctgaagcatggacagatttactaagcactccacttcatgcagccaccacaggagtaattctaataactactcgagatgacactattgctagagtaattggggtggaccacactcatagggttgatttgatgtcagctgatgtaggatgggagctgctttggaggagcatgaacatcaaccatgagaaacaagtgcaaaatctcaaggacataggtattgagattgttcgcaaatgtggtggccttcctcttgcaatcagagttattgctacagttttagcaagccaagaacaaacagagaatgaatggagacggatattggggaaaaatgcctggtccatgagcaaacttcctcatgaattaagtggtgctttatatctgagttatgaagtgctgccgcaccaactgaagcaatgttttctttattgtgcacttttccctgaagatgcaaccatttggcgtgacgatcttactaggatgtgggttgctgaaggctttatagatgaggaaaaaggacaattactagaagatacagcagagagatattattatgagctgatccatcggaacttgctccaaccagatggtttatattttgaccacagcaggtgcaagatgcatgatctcttaaggcaacttgcttcttatttgtcaagagaagaatgttttgttggagacccagagtcactagggactaatactatgtgcaaagtacggcgtatttcagttgtcactgagaaggacatagtggtgttacctagcatggacaaggatcaatataaagtgaggtgttttacaaacttatctgggaagtcagcaagaattgataattcacttttcaagagacttgtatgtcttcgcattttggatttgtctgacgcacttgtacatgacatcccaggtgcgattggaaatttgatttatctgcggttgctcgatcttgacaggacaaatatatgttctctcccagaggccattggttccctgcaaaaccttcaaatattgaacttgcaggggtgtgaatctttgcgcagacttcctttggcaacaactcaactatgcaatttgaggcgacttggtctttatggtacaccaataaaccaggtcccaaaagggataggaagactgaaatttctcaatgatttagaaggatttcctatcggtggtggaaatgacagtaccaaaatacaagatggatggaatttggaagagttgggtcatcttccacagttgaggcatcttggtatgataaaattggaaagagatgaagcatatttagaggaaaatgctagaaacattgaaaagatcttcgagaagctaacacctccgcacaacttagaaaagcttgttattgtgaatttctttggttgtagattccccacctggcttggtactgcccatttgcctttaatgaaatctgtgaccctcgtatattgcaaatcttgtgtgcatcttccatcaatcagacagctaccaaacttgaaatacctaagaattgagggagcaagtgcaatcaccaagattggacccgaatttgttggctgctgggagggtaatctcagatccacagaggcagttgctttccccaagcttgaagcgttggtcattgaggatatgcccaactgggaggagtggtcctttgttgaagaagaagtgcaggaggaggaagcagctgcagcagccaaggaagggagagaggatggaactgctgcttcgaagcaaaagggggaggaagccccgtctccaactccaaggccgtcatggctgctgccttgtttgacgaggttggatctcgtgggctgccccaagctgagggctctcccaccacagcttggacagcaggccaccaacttgaaggacatccttataagagaagcagaatgcttgaagacggtggaagacctcccgttcctctctggtgccctttcaattggtggctgtgaaggcctggagagggtctccaaccttccccaagtgagagagctgtttctaaatgaatgcccgaatttgaggcatgtcgaggagttgggtggtttggagcagctatggctgtcaaagaatatgcagaagatctcttcactgtgggtcccaaggcttcaggagcaacaccgccagctccatggagatgagcatgagctggaggtcaccgagtggctctga
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| Protein seq | MATILDSLVGSCANKLKEIITEEVILILGIQEELAELQRKTELIHCCISDAEARRMEESAVDNWLGQLREVLYDVDDIIDLARFKGSILLTDHPSSSSRKSIACTGLSISTCFSNVQARHEVAVKIRSLNRKIENISKDRVFLTLKSTVPTGSSSVLRVRKSSHLLEPNIVGKEIIHACRKMVDLVLEHKGRKLYKLAIVGTGGVGKTTLAQKIYNDRKIKGSFNKKAWVCVSKVYSEASLLRELLRIMEVHHDQDESIGELQSKLEIAIKETSFFLVLDDMWQSDAWTNLLRIPLHAAEMGAILITTRNNIVALEIGVDHTYRVDLMSTDVGWELLWKSMNISESIELQTLQDVGIEIVRKCGCLPLAIKVIARVLASKEQTENEWKKILSKNAWFMNNLPNDLRGALYLSYDELPRHLKQCFLYCSVYPEDANIYRDDLTRMWIAEGFIEDHGGQLLEETADEYYYELIHRNLLQPDGLYYDHSSCKMHDLLRQLACYLSREECFVGNPESLVGNTVSKLRRVSVVTDKNMVMLPSMDEVQYKVRTWKTSYEKTLRVDNSFFKRFPYLRVLDLTDSFVPSIPGCIGNLIHLRLLDLDGTNVSCLPESIGNLKNLQILNLERCVALHSLPSAITQLCNLRRLGLNYSPIYQVPKGIGKLEFLNDVEGFPVYGGSNEPYTEKDFSNIEKIFEQLIPPCNLEDLAIVKFFGRQYPFWIDSTHLAYVKSLHLFNCKFCMHLPPVGQLPNLKYLKIEGAAAVTIIGPEFAGHRASNLGRTVAFPKLEELLIRDMPNWEEWFFIDEATSTAKERVDDGDSAMPKEKALPPRMQILSRLRRLELSGCPKLKALPRQLAQINSLNEIELRWASSLKVVENFPLLSEMLLIATCQALEKVSNLPQLRELRVQDCPNLRLVEDLSTLEQLWLYEDMHEVSTLGMLISAPFGYFNLPNVPSIKAVAKFIYPATRREEGREASRTWVELEEEEEAAPSTPGAVAAKGPMERSNFSTLGSLSLPAAHPPAPPPPLLPGAINEVGGWTAVPGAPRYQTSANERCCTAEHSEGKGRHDTYLRVLQPQLQSQMEGVTWVKDELEELQRRTNVIRSSLQDAEARRMEDLVVEKWLDQLRDVMYDVDDIIDLARFKGSVLLPDYPMSSSRKSTACSGLSLSSCFSNIRIRHEVAVKIRSLNKKIDNISKDEVFLKLNRRHHNGSGSAWTPIESSSLVEPNLVGKEVIRACREVVDLVLAHKKKNVYKLAIVGTGGVGKTTLAQKIFNDKKLEGRFDHHAWACVSKEYSRDSLLRQVLRNMGIRYEQDESVPELQRKIKSHIANKSFFLVLDDVWNSEAWTDLLSTPLHAATTGVILITTRDDTIARVIGVDHTHRVDLMSADVGWELLWRSMNINHEKQVQNLKDIGIEIVRKCGGLPLAIRVIATVLASQEQTENEWRRILGKNAWSMSKLPHELSGALYLSYEVLPHQLKQCFLYCALFPEDATIWRDDLTRMWVAEGFIDEEKGQLLEDTAERYYYELIHRNLLQPDGLYFDHSRCKMHDLLRQLASYLSREECFVGDPESLGTNTMCKVRRISVVTEKDIVVLPSMDKDQYKVRCFTNLSGKSARIDNSLFKRLVCLRILDLSDALVHDIPGAIGNLIYLRLLDLDRTNICSLPEAIGSLQNLQILNLQGCESLRRLPLATTQLCNLRRLGLYGTPINQVPKGIGRLKFLNDLEGFPIGGGNDSTKIQDGWNLEELGHLPQLRHLGMIKLERDEAYLEENARNIEKIFEKLTPPHNLEKLVIVNFFGCRFPTWLGTAHLPLMKSVTLVYCKSCVHLPSIRQLPNLKYLRIEGASAITKIGPEFVGCWEGNLRSTEAVAFPKLEALVIEDMPNWEEWSFVEEEVQEEEAAAAAKEGREDGTAASKQKGEEAPSPTPRPSWLLPCLTRLDLVGCPKLRALPPQLGQQATNLKDILIREAECLKTVEDLPFLSGALSIGGCEGLERVSNLPQVRELFLNECPNLRHVEELGGLEQLWLSKNMQKISSLWVPRLQEQHRQLHGDEHELEVTEWL
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.000000 | 2.995102 | 0.126475 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0676800 | RBH | 0.0 | 0.000000 | 1.008491 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g44970 | RBH | 0.0 | 0.000000 | 0.092757 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0676800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0023830 | RBH | 0.132260 | 0.000000 | 0.000000 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0023760 | RBH | 0.000000 | 4.853582 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0023400 | RBH | 0.0 | 5.246101 | 0.271530 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0023020 | RBH | 0.000000 | 0.101189 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0023130 | SBH | 0.0 | 2.865955 | 0.108137 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0420000 | SBH | 0.003606 | 0.123159 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0023990 | RBH | 0.0 | 0.110572 | 0.353205 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0430000 | RBH | 0.0419675 | 0.0645025 | 0.058287 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0023800 | SBH | 0.366803 | 0.284244 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0022320 | SBH | 0.694426 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0023340 | RBH | 29.027081 | 26.589233 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0023070 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0023290 | RBH | 0.0 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G023560 | RBH | 0.051438 | 0.189383 | 0.174242 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0023750 | SBH | 0.152510 | 4.768662 | 0.673288 |
