Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsIR64_11g0024070 | OGI:11077650 | 16/16 | IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | Chr11:29609109-29618174 | ||||||||
| Gene Symbol | YR2, YR6, YR9, YR10, YR21, YR23, Osh359-2 | ||||||||||
| DNA seq | CAATCACCGGGGAACTTGCTCGTCATCTTCCTCGCAATAGGCGATCGATTTGCCGGCTTGCCATGGCTGCACGCACCAAAGGCCTCGCTCTGGGGTGTCTTTCTTTCAATTCCTCGCAACATAGCATGTGCTTGCTTGGTTGTTGGGTCTGATGGAAATGTCGTCTTGCAATGCAGCAGACGCGCCCCATGCCGCTGCTGTTCCCATTGATCTAGGATCACTCCCGTCTTTCCTTTCATGCTGAGCAAGTTCGCCTTCTGTACTTGAGTAAAACCCCTCAACTTTGTTGCCAGATATTTCTTTCTGGTTGCCCGTTTACCCAAGAAGCTATAGAAAAAGGTAACCTCATTATTTCATTTTTTCAGATTCAGTGATCCAGTATGGTCTTGTGGCAAAACACATGCAAAATAACATACTAGCTAGATATGTGCTCCTCTCTTACAAATATACTCTACTTTATGAGTCAGGCTATGTTTAGTTCAGTGCAAAGTTTGGATTTTGGTTGAAATTGGAGATGATGTGACTGAAAAGTTGTCTGTGTATGACATGTTGATGTGATAGAAAAGGACTGAAGTTTGGATCCAAACTTTGGATCTAAACACAGCCTCAGTCAGACAGTAAGACAAATAATTCAGTTCGGTCTCTAGCTATGATGGTCCGTGCATGTCATCGAATGCATTTATGCACACTCATAAAGTTTGAGTTGTCAGTGTTCATACTCCAGTAACTGAAAAACATCACAGGGCAAGCTATAAGTCATTGCCTACAAGTACCTACTAGTAGTACTGGTAGTAACTGAAAGCTGTGCAGCTAGCCTTCACTGGCAAGCTCCAAGCAGCAACAATCTCATATCGAATTAAGTGGAAACTCTTATACAAAGAATAGATGGATAATATATTTACTAAACTTCATCTTGCATTCATATTTAGTCAGCCTTATCTAACTTTTAAACTATGTTAACACAAGCTTGGTTACATGTCAGGCTGCATTTTTTACATTGATCAATTATATATGGTGGATTACCCCTTTTGAGTTTGTCGGATGGCAACAATAGTAGGCACATTGGTTGGATCATGCATCAATAAGTTGCAAGCGATCATTACAGACAAGGCAATACTCATTTTAGGGGTAAAAGATGAGCTTGAAGAACTGCAACGAAGAACAAACGTCATAAGATATTCTCTTCAGGATGCTGAAGCAAGGAGGATGGAAGATTTGGCAGTTGAAAAATGGCTTGACCACCTAAGAGATGTTATGTATGATGTTGATGATATTATTGATTTGGCTAGATTTAAAGGAAGTGTCCTACTACCTAACTATCCTATGTCATCGTCAAGGAAATCTACTGCTTGCAGTGGCCTTTCACTTTCATCCTGCTTTTCTAATATTCGTATACGTCATGAAGTTGCTGTAAAAATTAGAAGCCTCAACAAAAAGATAGATAACATTTCAAAGGATGATGTATTTTTAAAACTCAGCCGCACACAACATAATGGAAGTGGTTCAGCATGGACACCTATAGAAAGCTCCAGCCTAGTTGAACCTAACCTTGTGGGCAAGGAGGTCGTACATGCTTGCAGAGAAGTGGTGGATTTGGTGCTTGCACACAAGGCAAAGAATGTTTACAAGCTTGCTATTGTTGGAACAGGGGGAGTTGGCAAGACAACACTAGCTCAGAAAATATTCAATGATAAAAAATTAGAAGGGAGATTTGACCATCGTGCCTGGGTTTGTGTCTCCAAGGAGTATTCTATGGTTTCCCTTTTGACACAAGTTCTTAGTAATATGAAAATTCATTATGAACAAAATGAATCAGTTGGGAACCTTCAAAGCAAACTCAAAGCAGGCATTGCAGACAAGAGTTTTTTCCTTGTGTTGGATGATGTATGGCACTATAAAGCATGGGAAGATTTACTAAGAACTCCACTAAATGCGGCAGCCACAGGAATAATTCTAGTAACTACTCGAGATGAAACTATTGCTCGTGTAATTGGGGTGGACCGGACTCATAGAGTTGATTTGATGTCAGCCGATGTAGGATGGGAGTTACTTTGGAGGAGCATGAACATCAAAGAAGAGAAACAAGTGAAAAATCTACGGGACACAGGTATCGAGATTGTCCGCAAATGTGGTGGCCTACCTCTTGCAATCAGGGCTATTGCCAAAGTCTTAGCAAGCCTGCAAGATCAAACAGAGAATGAGTGGAGACAGATATTGGGGAAAAATGCCTGGTCCATGAGCAAACTTCCTGATGAATTAAATGGTGCTTTATATCTGAGTTATGAAGTGCTGCCGCACCAGCTGAAGCAATGTTTTCTTTATTGTGCACTTTTCCCTGAAGATGCAACCATTTTCTGTGGTGATCTTACTAGGATGTGGGTGGCTGAAGGCTTTATAGATGAGCAAGAAGGCCAATTACTAGAAGACACAGCAGAGAGGTATTATCATGAGTTGATCCATCGGAACTTGCTCCAACCAGATGGTTTATATTTTGACCACAGCTGGTGCAAGATGCATGATCTCTTAAGGCAACTTGCTTCTTATTTGTCAAGAGAAGAATGTTTTGTTGGAGACCCAGAGTCACTAGGGACTAATACTATGTGCAAAGTACGGCGTATTTCAGTTGTCACTGAGAAGGACATAGTGGTGTTACCTAGCATGGACAAGGATCAATATAAAGTGAGGTGTTTTACAAACTTATCTGGGAAGTCAGCAAGAATTGATAATTCACTTTTCAAGAGACTTGTATGTCTTCGCATTTTGGATTTGTCTGACTCACTTGTACATGACATCCCAGGTGCGATTGGAAATTTGATTTATCTGCGGTTGCTCGATCTTAACAGGACAAATATATGTTCTCTCCCAGAGGCCATTGGCTCCCTTCAAAGCCTTCAAATATTGAATTTGAAGGGGTGTGAATCTTTGCGCAGACTTCCTTTGGCAACAACTCAACTTTGCAATTTGAGGCGGCTTGGTCTTGCTCGTACTCCAATAAACCAGGTTCCAAAAGGGATAGGAAGACTGAAATTTCTCAATGATTTAGAAGGATTTCCTATCGGTGGTGGAAATGACAATACCAAAATACAAGATGGATGGAATTTGGAAGAGTTGGCTTATCTTCCACAGTTGAGGCAGCTTGGTATGATAAAATTGGAGAGAGCTACTCCTTGCAGCAGTAGAGACCCATTTCTACTAACAGAGAAAAAGCATCTCAAAGTTCTGGAACTACAGTAGTAGTAGTACTGTTTTCAGAAGGTGTAAAGGAAAAGTACTGTTTGTAAAAAAAAAGAAAAAAAAATAATACTAACGTGGAGTACGTATGTATGCCGCCGGGAATAAAAGGAAAAAAAATAATACTAATGTTCCCTGCCCGATCCAGACCTCTTGTCTACGGTGTTCTCCTCTTTGTAGGGACACCAGTTAGAGCAAACATGGCAATTTTTTTTAAAAAAAGTAGGGACACCAGATTTATTTTTTTAGATGGAGATCTAATGGTTTAAATTAATGGGTCCACCGATTTAAAAGAAAATCGACGGTGAGATTATAGAATGCCACGTGGCGATCTAGGAGCGTTTGTAGAAGGCCACATGGCGGCTTGAGAGCGTTTGTAGGAAGTTTCATGGACTTTTAGTATATAATAGATAGATAGTTGTTGCTCCAAGACTAGCATTTTTGTGTAATTCCTTTTCTAAAATCTATAGCTCTTTCGTAACTTCATTACTAAATATGCAGTTTTGTGGTACAATGCTTTAAATTTGTAGTTCCGTGATAAATTTCATGCTAATTTGTAGTTTTGTGATACACATTCTTAAATATGTAGTTCCGTGATAGTTTGGTCAAAGTATGTGTAGTTTTGTGAAATTTACTCTTCTAAAATCCATAAAGGCATCTATAGTATATGAGAAAAATAGTTACTTAATTAAAGTTTAGAAAAACAAAAAATATATATGCTAAATATTCTAAAAAAGAAGCACACATGGTATAAATGAGATATAGTTTTATGGGAACCAACTCGATTGTTCCGTCACAATATTTTGCCATAAATTTTAAACCACACGGTTTTAACTAATTTTAGTTTATGATTTATATGCAGCAAGGATTATTAGTAGAAAATCACAGCCAATGTTCGAGACAAACCCAAACAAATTATTGAAAAAAAAATCAGATTTAGAATAGAGTAAAAAATATTTCAATGAAAATTCAGGAACACCAATAAAATTTCAAACACATTAAATAAGGTAGCCCATGCATACCAAAAGTCAACACAGCCATGCCAAAACACATTAAATGAGACATGCTATTTTTTTAATAAGGTGAATGGTCAAACGTCATGCCAAAAGTTAATGGTATTATCTATTAAAATAGATTGAGTGAATAATTTTTTTGCATTGTGTAATGAACTGATCGTTGTTCACTTATTCAAGTTGAGGGATGGCAAACGAGTAATATATGATCGCTGTTCATTATCTGGTCTCTACTAGCTAGCGAGCTTGTATTAGCAATAGTTTTTTCCCCTTAAATTCTACCACACACACAGTCTTGAAAACTTTACACATGTATCACCTCAAGGTTCCTTGCATCGGGATATTTAACTTTGGGCCACTTTTAAGATGTGGCAATTAATTATTTGCCACTCGCTGTCTATGACATGTGGGCCCTCATGTGTCTATGACATGTGGGTCCAGTGGCAAATCAATTATCACCATATATAAGAGTGGCAAATAATTAATTAATCCTCTTGCATCGGTAAATATATATATGAAGCAATGCAATGCTTTCTCTGGAGTACATTCCATATACCTGCCTTGTATACAGAAAACCATGCATGTTGGACTCCACCAAGTAAAGCATAATTAAGCATGTCTTGATTTGATTGCTATGTGAATTGTGAAGGCAGAAGAAATGGGTGCACGAATGGCATATAGTATGGGGTGACCCGACGGTTCAGAAGAACAAAGTGGAAGGAGAAAAGAAGAAAAGAATAATAAAAGGAAAAGAGAAAGGAGAAAGTGTGTATCCTTCTGTCCCCGGGTGGAGTGTTGGGGCTTGTTTGGATGGATTCCAAAATTGATTTTATCAAAAATTTTGGTAGTAGTACTAATAAATTTGACCAATATTTATTCGGTTAATTTGCTAGCAAAACTTCAGTAGTTAGCTGCGACTTTATACAATGTTCTTTTTTGGCTTATTAGAGAGAGCTACTTCCTTGTTTATCATGAGCACACTTCCTAAAATATTGAAAAGGTATTCTTTTTTTTTTGCAAAAACTTTTTATATAGAAATTTCTTTAGAAAGTTAAATATTGAAATGAGCCAGCCTCTATATCAAACCAAATTTTAGCAACTCTACTAAAATCATGATCTAAAATTAAAAATTAAGTGATCAAACAAGCAAGTGCAATTCTAAAGATGTTTAGATTGAATGAGAGCGATAAAGATGTAATTCTAAACTGGATTAGGATGTTGTAATATTTTTTGTTTCTTTTTTACTTTATTATTAATATTTTTTTTTACAGCGGAGGCCTCCCCTGCCGTGTTCCTTAAAAATAAAAGCAAGTGCAATAGTAGCACCATATTATAGGAAAGAAAAAAAAAAGATAAAAAGTGGTCCTGTGGTTGTCTGGTCTTCTGAATGTTCAATTAGGCAAGCAAGGGGCTATGTGTTCAGCTATATATGCGATAAAAGCAAGGGTTATATACCACCTTCCCTAAACAGTTCCTCCATTGTTGCGTTCCGGAACGCGTCATCCTACTACATTTCTATCAGCTGTGGGTAAGCTCAAAACATATAGTTGAACTTGTTTCTTTTACCCCCTTAAAGTTAAGTTAATTAATTTGCAAATGCTCATCTTGACCACAGGCACAGGAAGTTTCTCAAGGATTAATTGTGTTCATTTCTGTTTGCCCTCTGAATGATCGATGAGATCCTCAATGTAGCAGTGAAAAATCGTTCATCTAAGTAAACCCATATAAATTACGATATCTGCTATAGGTTCTCCTTGCAGCATTGCTGCTCTCTCTGATGGGTGAATGTCAACAGATGTATCTATAATCTATATATGTTTCAGGTACTACGTACCCATCAATTCTTCTAGCTAGTTAATCACCTTAATTTTGAACCATTTTGTTACTGCATTGATCTATATAACGAGCATACACTTCATTTTGTCTTTTCTCCCCACTTCTTTTGCAGTTGTAGCACGCATGCTATCTGCTGTTTTCTCTTAACGGCCTTCTGATATCTATTCTATGAGCAATTCTACGGTCCTTGAGGAGGTACCATAAGGTACCAAAAATTTAGTGTAAAATTTGGTACCTCATGGTATCTCATAGTACCTAGGTACTAATAGGTACTAAATTTACAATAGAAAAAATGGTACCTCCTCAAGGACTGTAAAATTGCTCCTATTCTATACTCCGGCTTATACATTCAGTTACTTTTGATCTCTAATTCCACATTAATCTCAGTGTCTGTTGAGATCTTAAGTAGATGGGTTGGTCATATTTTTGTCCATTTTTCAGATCGTGTGATTCTCATAAGAAATTTACTTGGAAATTTTGGTGCATCACCATCAAGAGTTTCTCTATGGCAACCATACTGGATTCTTTGATTGGATCATGCGTAAACAAGTTGCAAGGGATCATTACAGAGGAAGCAATACTAATTTTAGGTGTAGAAGAAGAACTCAGAAAACTGCAGGAAAGAATGAAACAAATACAGTGCTTTATCAGTGATGCTGAGCGAAGGGGCATGGAAGACTCAGCAGTACACAATTGGGTTTCTTGGCTAAAAGATGCTATGTATGATGCTGATGACATTATCGATTTGGCTAGCTTTGAAGGAAGCAAGCTATTAAATGGCCATTCTTCTTCACCAAGAAAATCATTTGCATGCAGTGGGCTTTCATTTCTCTCTTGCTTTTCCAATATCCGGGTTCGCCATAAGATTGGTGATAAAATTAGAAGCCTGAACCAAAAATTAGAGGAAATAGCAAAGGATAAAATATTTGCAACACTTGAGAATACACAGTCATCTCATAAAGATTCAACATCAGAATTGAGAAAAAGTTCTCAAATTGTTGAGCCCAACCTTGTCGGGAAAGAGATATTACATGCTTGTAGAAAATTGGTGAGCCAGGTGCTTACACACAAGGAAAAGAAGGCTTACAAGCTTGCTATTATTGGAACAGGGGGAATCGGAAAGACAACACTTGCTCAGAAAGTATTCAATGATGAGAAATTAAAACAAAGCTTCGACAAACATTCATGGATCTGTGTTTCTCAGGACTACTCCCCAGCCTCTATTTTGGGACAACTACTTAGAACCATCGACGTTCAATACAAACAAGAAGAATCAGTTGGCGAGCTACAAAGCAAGATTGAATCGGCTATTAAAGATAAGAGTTATTTTCTTGTGTTGGATGATGTATGGCAGTCTGATGTATGGACCAATCTGCTACGAACTCCACTGTATGCTGCAACCTCAGGAATAATTTTGATAACTACTCGGCATGATACTGTCGCTAGAGAAATTGGGGTTGAGGAACCACATCATGTCAACCTAATGTCACCAGCTGTTGGCTGGGAGCTACTCTGGAAGAGCATTAACATTGAGGACGATAAAGAAGTGCAAAATCTCCGAGACATAGGGATTGAGATTGTTCAGAAATGTGGTGGGCTACCTCTTGCAATCAAGGTTATTGCTAGAGTTTTGGCAAGCAAAGATAAAACAGAGAACGAATGGAAAAAGATTTTAGCTAATTACGTTTGGTCCATGGATAAACTTCCTAAGGAAATAAGAGGTGCTCTATATCTAAGCTACGATGATTTACCACAGCATTTGAAGCAATGTTTTCTTTATTGTATTGTATATCCTGAAGACTGCACCATTCGTCGTGATGATCTTATCAGGTTGTGGGTTGCCGAAGGCTTTGTAGAAGTGCACAAAGATCAACTACTAGAAGATACAGCAGAAGAATACTACTATGAGCTAATAAGTAGGAATCTCCTCCAACCGGTTGACACATTTTTTGATCAGAGTGAATGCAAAATGCATGATCTCTTAAGGCAACTTGCTTGCCATCTATCAAGAGAAGAATGTTATATTGGAGATCCAACATCATTGGTGGATAATAACATGTGTAAATTGCGCCGCATTTTAGCTATCACCGAGAAAGATATGGTTGTCATACCTAGCATGGGTAAGGAGGAGATTAAGTTGAGAACTTTTAGAACCCAACAAAATCCACTGGGAATTGAGAAGACATTTTTCATGAGATTTGTGTATCTTCGTGTTTTGGATTTGGCTGACTTACTTGTGGAAAAAATACCAGATTGTCTTGGAAATTTAATTCATCTACGTTTACTTGATCTTGATGGAACCCTCATATCCAGTGTTCCAGAGTCTATTGGTGCTCTAAAAAATCTCCAGATGTTACACTTACAGAGGTGTAAATATTTGCACAGTTTGCCTAGTGCAATCACTCGGTTATGCAATTTAAGGCGGCTTGGTATTGATTTTACACCAATAAATAAGTTTCCAAGAGGGATAGGAAGACTGCAATTCCTCAATGATTTAGAAGGATTTCCTGTTGGTGGTGGAAGTGACAATACTAAAATGCAAGACGGATGGAACTTGCAGGAGTTAGCTCATCTTTCACAGTTGTGCCAGCTTGACTTGAACAAATTGGAAAGAGCAACTCCTAGGAGCAGTACAGATGCATTGTTGCTGACTGACAAAAAGCATCTTAAAAAACTAAATCTATGCTGCACCAAACCCACTGATGAAGAATATTCAGAGAAAGGCATTAGCAATGTTGAGATGATCTTTGAGCAGCTAAGTCCTCCACGCAATTTAGAAGATCTTATGATTGTATTATTCTTTGGGCGAAAGTTCCCCACCTGGCTTAGTACTTCCCAATTATCTTCACTGACATATTTGAAACTCATAGATTGCAACTCTTGTGTGCATCTTCCCCCAATCGGACAGCTACCAAACTTGAAATACCTAAAAATTAATGGAGCAAGTGCAATCACCAAGATTGGACCCGAATTTGTTGGCTGCTAG
More
|
||||||||||
| CDS seq | ATGGCAACAATAGTAGGCACATTGGTTGGATCATGCATCAATAAGTTGCAAGCGATCATTACAGACAAGGCAATACTCATTTTAGGGGTAAAAGATGAGCTTGAAGAACTGCAACGAAGAACAAACGTCATAAGATATTCTCTTCAGGATGCTGAAGCAAGGAGGATGGAAGATTTGGCAGTTGAAAAATGGCTTGACCACCTAAGAGATGTTATGTATGATGTTGATGATATTATTGATTTGGCTAGATTTAAAGGAAGTGTCCTACTACCTAACTATCCTATGTCATCGTCAAGGAAATCTACTGCTTGCAGTGGCCTTTCACTTTCATCCTGCTTTTCTAATATTCGTATACGTCATGAAGTTGCTGTAAAAATTAGAAGCCTCAACAAAAAGATAGATAACATTTCAAAGGATGATGTATTTTTAAAACTCAGCCGCACACAACATAATGGAAGTGGTTCAGCATGGACACCTATAGAAAGCTCCAGCCTAGTTGAACCTAACCTTGTGGGCAAGGAGGTCGTACATGCTTGCAGAGAAGTGGTGGATTTGGTGCTTGCACACAAGGCAAAGAATGTTTACAAGCTTGCTATTGTTGGAACAGGGGGAGTTGGCAAGACAACACTAGCTCAGAAAATATTCAATGATAAAAAATTAGAAGGGAGATTTGACCATCGTGCCTGGGTTTGTGTCTCCAAGGAGTATTCTATGGTTTCCCTTTTGACACAAGTTCTTAGTAATATGAAAATTCATTATGAACAAAATGAATCAGTTGGGAACCTTCAAAGCAAACTCAAAGCAGGCATTGCAGACAAGAGTTTTTTCCTTGTGTTGGATGATGTATGGCACTATAAAGCATGGGAAGATTTACTAAGAACTCCACTAAATGCGGCAGCCACAGGAATAATTCTAGTAACTACTCGAGATGAAACTATTGCTCGTGTAATTGGGGTGGACCGGACTCATAGAGTTGATTTGATGTCAGCCGATGTAGGATGGGAGTTACTTTGGAGGAGCATGAACATCAAAGAAGAGAAACAAGTGAAAAATCTACGGGACACAGGTATCGAGATTGTCCGCAAATGTGGTGGCCTACCTCTTGCAATCAGGGCTATTGCCAAAGTCTTAGCAAGCCTGCAAGATCAAACAGAGAATGAGTGGAGACAGATATTGGGGAAAAATGCCTGGTCCATGAGCAAACTTCCTGATGAATTAAATGGTGCTTTATATCTGAGTTATGAAGTGCTGCCGCACCAGCTGAAGCAATGTTTTCTTTATTGTGCACTTTTCCCTGAAGATGCAACCATTTTCTGTGGTGATCTTACTAGGATGTGGGTGGCTGAAGGCTTTATAGATGAGCAAGAAGGCCAATTACTAGAAGACACAGCAGAGAGGTATTATCATGAGTTGATCCATCGGAACTTGCTCCAACCAGATGGTTTATATTTTGACCACAGCTGGTGCAAGATGCATGATCTCTTAAGGCAACTTGCTTCTTATTTGTCAAGAGAAGAATGTTTTGTTGGAGACCCAGAGTCACTAGGGACTAATACTATGTGCAAAGTACGGCGTATTTCAGTTGTCACTGAGAAGGACATAGTGGTGTTACCTAGCATGGACAAGGATCAATATAAAGTGAGGCAGAAGAAATGGGTGCACGAATGGCATATAGTATGGGGTGACCCGACGGTTCAGAAGAACAAAGTGGAAGGAGAAAAGAAGAAAAGAATAATAAAAGGAAAAGAGAAAGGAGAAAATGTATCTATAATCTATATATGTTTCAGATCGTGTGATTCTCATAAGAAATTTACTTGGAAATTTTGGTGCATCACCATCAAGAGTTTCTCTATGGCAACCATACTGGATTCTTTGATTGGATCATGCGTAAACAAGTTGCAAGGGATCATTACAGAGGAAGCAATACTAATTTTAGGTGTAGAAGAAGAACTCAGAAAACTGCAGGAAAGAATGAAACAAATACAGTGCTTTATCAGTGATGCTGAGCGAAGGGGCATGGAAGACTCAGCAGTACACAATTGGGTTTCTTGGCTAAAAGATGCTATGTATGATGCTGATGACATTATCGATTTGGCTAGCTTTGAAGGAAGCAAGCTATTAAATGGCCATTCTTCTTCACCAAGAAAATCATTTGCATGCAGTGGGCTTTCATTTCTCTCTTGCTTTTCCAATATCCGGGTTCGCCATAAGATTGGTGATAAAATTAGAAGCCTGAACCAAAAATTAGAGGAAATAGCAAAGGATAAAATATTTGCAACACTTGAGAATACACAGTCATCTCATAAAGATTCAACATCAGAATTGAGAAAAAGTTCTCAAATTGTTGAGCCCAACCTTGTCGGGAAAGAGATATTACATGCTTGTAGAAAATTGGTGAGCCAGGTGCTTACACACAAGGAAAAGAAGGCTTACAAGCTTGCTATTATTGGAACAGGGGGAATCGGAAAGACAACACTTGCTCAGAAAGTATTCAATGATGAGAAATTAAAACAAAGCTTCGACAAACATTCATGGATCTGTGTTTCTCAGGACTACTCCCCAGCCTCTATTTTGGGACAACTACTTAGAACCATCGACGTTCAATACAAACAAGAAGAATCAGTTGGCGAGCTACAAAGCAAGATTGAATCGGCTATTAAAGATAAGAGTTATTTTCTTGTGTTGGATGATGTATGGCAGTCTGATGTATGGACCAATCTGCTACGAACTCCACTGTATGCTGCAACCTCAGGAATAATTTTGATAACTACTCGGCATGATACTGTCGCTAGAGAAATTGGGGTTGAGGAACCACATCATGTCAACCTAATGTCACCAGCTGTTGGCTGGGAGCTACTCTGGAAGAGCATTAACATTGAGGACGATAAAGAAGTGCAAAATCTCCGAGACATAGGGATTGAGATTGTTCAGAAATGTGGTGGGCTACCTCTTGCAATCAAGGTTATTGCTAGAGTTTTGGCAAGCAAAGATAAAACAGAGAACGAATGGAAAAAGATTTTAGCTAATTACGTTTGGTCCATGGATAAACTTCCTAAGGAAATAAGAGGTGCTCTATATCTAAGCTACGATGATTTACCACAGCATTTGAAGCAATGTTTTCTTTATTGTATTGTATATCCTGAAGACTGCACCATTCGTCGTGATGATCTTATCAGGTTGTGGGTTGCCGAAGGCTTTGTAGAAGTGCACAAAGATCAACTACTAGAAGATACAGCAGAAGAATACTACTATGAGCTAATAAGTAGGAATCTCCTCCAACCGGTTGACACATTTTTTGATCAGAGTGAATGCAAAATGCATGATCTCTTAAGGCAACTTGCTTGCCATCTATCAAGAGAAGAATGTTATATTGGAGATCCAACATCATTGGTGGATAATAACATGTGTAAATTGCGCCGCATTTTAGCTATCACCGAGAAAGATATGGTTGTCATACCTAGCATGGGTAAGGAGGAGATTAAGTTGAGAACTTTTAGAACCCAACAAAATCCACTGGGAATTGAGAAGACATTTTTCATGAGATTTGTGTATCTTCGTGTTTTGGATTTGGCTGACTTACTTGTGGAAAAAATACCAGATTGTCTTGGAAATTTAATTCATCTACGTTTACTTGATCTTGATGGAACCCTCATATCCAGTGTTCCAGAGTCTATTGGTGCTCTAAAAAATCTCCAGATGTTACACTTACAGAGGTGTAAATATTTGCACAGTTTGCCTAGTGCAATCACTCGGTTATGCAATTTAAGGCGGCTTGGTATTGATTTTACACCAATAAATAAGTTTCCAAGAGGGATAGGAAGACTGCAATTCCTCAATGATTTAGAAGGATTTCCTGTTGGTGGTGGAAGTGACAATACTAAAATGCAAGACGGATGGAACTTGCAGGAGTTAGCTCATCTTTCACAGTTGTGCCAGCTTGACTTGAACAAATTGGAAAGAGCAACTCCTAGGAGCAGTACAGATGCATTGTTGCTGACTGACAAAAAGCATCTTAAAAAACTAAATCTATGCTGCACCAAACCCACTGATGAAGAATATTCAGAGAAAGGCATTAGCAATGTTGAGATGATCTTTGAGCAGCTAAGTCCTCCACGCAATTTAGAAGATCTTATGATTGTATTATTCTTTGGGCGAAAGTTCCCCACCTGGCTTAGTACTTCCCAATTATCTTCACTGACATATTTGAAACTCATAGATTGCAACTCTTGTGTGCATCTTCCCCCAATCGGACAGCTACCAAACTTGAAATACCTAAAAATTAATGGAGCAAGTGCAATCACCAAGATTGGACCCGAATTTGTTGGCTGCTAG
More
|
||||||||||
| Protein seq | MATIVGTLVGSCINKLQAIITDKAILILGVKDELEELQRRTNVIRYSLQDAEARRMEDLAVEKWLDHLRDVMYDVDDIIDLARFKGSVLLPNYPMSSSRKSTACSGLSLSSCFSNIRIRHEVAVKIRSLNKKIDNISKDDVFLKLSRTQHNGSGSAWTPIESSSLVEPNLVGKEVVHACREVVDLVLAHKAKNVYKLAIVGTGGVGKTTLAQKIFNDKKLEGRFDHRAWVCVSKEYSMVSLLTQVLSNMKIHYEQNESVGNLQSKLKAGIADKSFFLVLDDVWHYKAWEDLLRTPLNAAATGIILVTTRDETIARVIGVDRTHRVDLMSADVGWELLWRSMNIKEEKQVKNLRDTGIEIVRKCGGLPLAIRAIAKVLASLQDQTENEWRQILGKNAWSMSKLPDELNGALYLSYEVLPHQLKQCFLYCALFPEDATIFCGDLTRMWVAEGFIDEQEGQLLEDTAERYYHELIHRNLLQPDGLYFDHSWCKMHDLLRQLASYLSREECFVGDPESLGTNTMCKVRRISVVTEKDIVVLPSMDKDQYKVRQKKWVHEWHIVWGDPTVQKNKVEGEKKKRIIKGKEKGENVSIIYICFRSCDSHKKFTWKFWCITIKSFSMATILDSLIGSCVNKLQGIITEEAILILGVEEELRKLQERMKQIQCFISDAERRGMEDSAVHNWVSWLKDAMYDADDIIDLASFEGSKLLNGHSSSPRKSFACSGLSFLSCFSNIRVRHKIGDKIRSLNQKLEEIAKDKIFATLENTQSSHKDSTSELRKSSQIVEPNLVGKEILHACRKLVSQVLTHKEKKAYKLAIIGTGGIGKTTLAQKVFNDEKLKQSFDKHSWICVSQDYSPASILGQLLRTIDVQYKQEESVGELQSKIESAIKDKSYFLVLDDVWQSDVWTNLLRTPLYAATSGIILITTRHDTVAREIGVEEPHHVNLMSPAVGWELLWKSINIEDDKEVQNLRDIGIEIVQKCGGLPLAIKVIARVLASKDKTENEWKKILANYVWSMDKLPKEIRGALYLSYDDLPQHLKQCFLYCIVYPEDCTIRRDDLIRLWVAEGFVEVHKDQLLEDTAEEYYYELISRNLLQPVDTFFDQSECKMHDLLRQLACHLSREECYIGDPTSLVDNNMCKLRRILAITEKDMVVIPSMGKEEIKLRTFRTQQNPLGIEKTFFMRFVYLRVLDLADLLVEKIPDCLGNLIHLRLLDLDGTLISSVPESIGALKNLQMLHLQRCKYLHSLPSAITRLCNLRRLGIDFTPINKFPRGIGRLQFLNDLEGFPVGGGSDNTKMQDGWNLQELAHLSQLCQLDLNKLERATPRSSTDALLLTDKKHLKKLNLCCTKPTDEEYSEKGISNVEMIFEQLSPPRNLEDLMIVLFFGRKFPTWLSTSQLSSLTYLKLIDCNSCVHLPPIGQLPNLKYLKINGASAITKIGPEFVGC |
||||||||||
| Function | Putative disease resistance protein RGA4 [UniProtKB/Swiss-Prot:Q7XA39] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsIR64_11g0024070 | OsIR64_11g0024070.01 | Chr11 | 29610150 | 29618174 | + | NAM | ||
| CDS seq | ATGGCAACAATAGTAGGCACATTGGTTGGATCATGCATCAATAAGTTGCAAGCGATCATTACAGACAAGGCAATACTCATTTTAGGGGTAAAAGATGAGCTTGAAGAACTGCAACGAAGAACAAACGTCATAAGATATTCTCTTCAGGATGCTGAAGCAAGGAGGATGGAAGATTTGGCAGTTGAAAAATGGCTTGACCACCTAAGAGATGTTATGTATGATGTTGATGATATTATTGATTTGGCTAGATTTAAAGGAAGTGTCCTACTACCTAACTATCCTATGTCATCGTCAAGGAAATCTACTGCTTGCAGTGGCCTTTCACTTTCATCCTGCTTTTCTAATATTCGTATACGTCATGAAGTTGCTGTAAAAATTAGAAGCCTCAACAAAAAGATAGATAACATTTCAAAGGATGATGTATTTTTAAAACTCAGCCGCACACAACATAATGGAAGTGGTTCAGCATGGACACCTATAGAAAGCTCCAGCCTAGTTGAACCTAACCTTGTGGGCAAGGAGGTCGTACATGCTTGCAGAGAAGTGGTGGATTTGGTGCTTGCACACAAGGCAAAGAATGTTTACAAGCTTGCTATTGTTGGAACAGGGGGAGTTGGCAAGACAACACTAGCTCAGAAAATATTCAATGATAAAAAATTAGAAGGGAGATTTGACCATCGTGCCTGGGTTTGTGTCTCCAAGGAGTATTCTATGGTTTCCCTTTTGACACAAGTTCTTAGTAATATGAAAATTCATTATGAACAAAATGAATCAGTTGGGAACCTTCAAAGCAAACTCAAAGCAGGCATTGCAGACAAGAGTTTTTTCCTTGTGTTGGATGATGTATGGCACTATAAAGCATGGGAAGATTTACTAAGAACTCCACTAAATGCGGCAGCCACAGGAATAATTCTAGTAACTACTCGAGATGAAACTATTGCTCGTGTAATTGGGGTGGACCGGACTCATAGAGTTGATTTGATGTCAGCCGATGTAGGATGGGAGTTACTTTGGAGGAGCATGAACATCAAAGAAGAGAAACAAGTGAAAAATCTACGGGACACAGGTATCGAGATTGTCCGCAAATGTGGTGGCCTACCTCTTGCAATCAGGGCTATTGCCAAAGTCTTAGCAAGCCTGCAAGATCAAACAGAGAATGAGTGGAGACAGATATTGGGGAAAAATGCCTGGTCCATGAGCAAACTTCCTGATGAATTAAATGGTGCTTTATATCTGAGTTATGAAGTGCTGCCGCACCAGCTGAAGCAATGTTTTCTTTATTGTGCACTTTTCCCTGAAGATGCAACCATTTTCTGTGGTGATCTTACTAGGATGTGGGTGGCTGAAGGCTTTATAGATGAGCAAGAAGGCCAATTACTAGAAGACACAGCAGAGAGGTATTATCATGAGTTGATCCATCGGAACTTGCTCCAACCAGATGGTTTATATTTTGACCACAGCTGGTGCAAGATGCATGATCTCTTAAGGCAACTTGCTTCTTATTTGTCAAGAGAAGAATGTTTTGTTGGAGACCCAGAGTCACTAGGGACTAATACTATGTGCAAAGTACGGCGTATTTCAGTTGTCACTGAGAAGGACATAGTGGTGTTACCTAGCATGGACAAGGATCAATATAAAGTGAGGCAGAAGAAATGGGTGCACGAATGGCATATAGTATGGGGTGACCCGACGGTTCAGAAGAACAAAGTGGAAGGAGAAAAGAAGAAAAGAATAATAAAAGGAAAAGAGAAAGGAGAAAATGTATCTATAATCTATATATGTTTCAGATCGTGTGATTCTCATAAGAAATTTACTTGGAAATTTTGGTGCATCACCATCAAGAGTTTCTCTATGGCAACCATACTGGATTCTTTGATTGGATCATGCGTAAACAAGTTGCAAGGGATCATTACAGAGGAAGCAATACTAATTTTAGGTGTAGAAGAAGAACTCAGAAAACTGCAGGAAAGAATGAAACAAATACAGTGCTTTATCAGTGATGCTGAGCGAAGGGGCATGGAAGACTCAGCAGTACACAATTGGGTTTCTTGGCTAAAAGATGCTATGTATGATGCTGATGACATTATCGATTTGGCTAGCTTTGAAGGAAGCAAGCTATTAAATGGCCATTCTTCTTCACCAAGAAAATCATTTGCATGCAGTGGGCTTTCATTTCTCTCTTGCTTTTCCAATATCCGGGTTCGCCATAAGATTGGTGATAAAATTAGAAGCCTGAACCAAAAATTAGAGGAAATAGCAAAGGATAAAATATTTGCAACACTTGAGAATACACAGTCATCTCATAAAGATTCAACATCAGAATTGAGAAAAAGTTCTCAAATTGTTGAGCCCAACCTTGTCGGGAAAGAGATATTACATGCTTGTAGAAAATTGGTGAGCCAGGTGCTTACACACAAGGAAAAGAAGGCTTACAAGCTTGCTATTATTGGAACAGGGGGAATCGGAAAGACAACACTTGCTCAGAAAGTATTCAATGATGAGAAATTAAAACAAAGCTTCGACAAACATTCATGGATCTGTGTTTCTCAGGACTACTCCCCAGCCTCTATTTTGGGACAACTACTTAGAACCATCGACGTTCAATACAAACAAGAAGAATCAGTTGGCGAGCTACAAAGCAAGATTGAATCGGCTATTAAAGATAAGAGTTATTTTCTTGTGTTGGATGATGTATGGCAGTCTGATGTATGGACCAATCTGCTACGAACTCCACTGTATGCTGCAACCTCAGGAATAATTTTGATAACTACTCGGCATGATACTGTCGCTAGAGAAATTGGGGTTGAGGAACCACATCATGTCAACCTAATGTCACCAGCTGTTGGCTGGGAGCTACTCTGGAAGAGCATTAACATTGAGGACGATAAAGAAGTGCAAAATCTCCGAGACATAGGGATTGAGATTGTTCAGAAATGTGGTGGGCTACCTCTTGCAATCAAGGTTATTGCTAGAGTTTTGGCAAGCAAAGATAAAACAGAGAACGAATGGAAAAAGATTTTAGCTAATTACGTTTGGTCCATGGATAAACTTCCTAAGGAAATAAGAGGTGCTCTATATCTAAGCTACGATGATTTACCACAGCATTTGAAGCAATGTTTTCTTTATTGTATTGTATATCCTGAAGACTGCACCATTCGTCGTGATGATCTTATCAGGTTGTGGGTTGCCGAAGGCTTTGTAGAAGTGCACAAAGATCAACTACTAGAAGATACAGCAGAAGAATACTACTATGAGCTAATAAGTAGGAATCTCCTCCAACCGGTTGACACATTTTTTGATCAGAGTGAATGCAAAATGCATGATCTCTTAAGGCAACTTGCTTGCCATCTATCAAGAGAAGAATGTTATATTGGAGATCCAACATCATTGGTGGATAATAACATGTGTAAATTGCGCCGCATTTTAGCTATCACCGAGAAAGATATGGTTGTCATACCTAGCATGGGTAAGGAGGAGATTAAGTTGAGAACTTTTAGAACCCAACAAAATCCACTGGGAATTGAGAAGACATTTTTCATGAGATTTGTGTATCTTCGTGTTTTGGATTTGGCTGACTTACTTGTGGAAAAAATACCAGATTGTCTTGGAAATTTAATTCATCTACGTTTACTTGATCTTGATGGAACCCTCATATCCAGTGTTCCAGAGTCTATTGGTGCTCTAAAAAATCTCCAGATGTTACACTTACAGAGGTGTAAATATTTGCACAGTTTGCCTAGTGCAATCACTCGGTTATGCAATTTAAGGCGGCTTGGTATTGATTTTACACCAATAAATAAGTTTCCAAGAGGGATAGGAAGACTGCAATTCCTCAATGATTTAGAAGGATTTCCTGTTGGTGGTGGAAGTGACAATACTAAAATGCAAGACGGATGGAACTTGCAGGAGTTAGCTCATCTTTCACAGTTGTGCCAGCTTGACTTGAACAAATTGGAAAGAGCAACTCCTAGGAGCAGTACAGATGCATTGTTGCTGACTGACAAAAAGCATCTTAAAAAACTAAATCTATGCTGCACCAAACCCACTGATGAAGAATATTCAGAGAAAGGCATTAGCAATGTTGAGATGATCTTTGAGCAGCTAAGTCCTCCACGCAATTTAGAAGATCTTATGATTGTATTATTCTTTGGGCGAAAGTTCCCCACCTGGCTTAGTACTTCCCAATTATCTTCACTGACATATTTGAAACTCATAGATTGCAACTCTTGTGTGCATCTTCCCCCAATCGGACAGCTACCAAACTTGAAATACCTAAAAATTAATGGAGCAAGTGCAATCACCAAGATTGGACCCGAATTTGTTGGCTGCTAG
More
|
|||||||
| Protein seq | MATIVGTLVGSCINKLQAIITDKAILILGVKDELEELQRRTNVIRYSLQDAEARRMEDLAVEKWLDHLRDVMYDVDDIIDLARFKGSVLLPNYPMSSSRKSTACSGLSLSSCFSNIRIRHEVAVKIRSLNKKIDNISKDDVFLKLSRTQHNGSGSAWTPIESSSLVEPNLVGKEVVHACREVVDLVLAHKAKNVYKLAIVGTGGVGKTTLAQKIFNDKKLEGRFDHRAWVCVSKEYSMVSLLTQVLSNMKIHYEQNESVGNLQSKLKAGIADKSFFLVLDDVWHYKAWEDLLRTPLNAAATGIILVTTRDETIARVIGVDRTHRVDLMSADVGWELLWRSMNIKEEKQVKNLRDTGIEIVRKCGGLPLAIRAIAKVLASLQDQTENEWRQILGKNAWSMSKLPDELNGALYLSYEVLPHQLKQCFLYCALFPEDATIFCGDLTRMWVAEGFIDEQEGQLLEDTAERYYHELIHRNLLQPDGLYFDHSWCKMHDLLRQLASYLSREECFVGDPESLGTNTMCKVRRISVVTEKDIVVLPSMDKDQYKVRQKKWVHEWHIVWGDPTVQKNKVEGEKKKRIIKGKEKGENVSIIYICFRSCDSHKKFTWKFWCITIKSFSMATILDSLIGSCVNKLQGIITEEAILILGVEEELRKLQERMKQIQCFISDAERRGMEDSAVHNWVSWLKDAMYDADDIIDLASFEGSKLLNGHSSSPRKSFACSGLSFLSCFSNIRVRHKIGDKIRSLNQKLEEIAKDKIFATLENTQSSHKDSTSELRKSSQIVEPNLVGKEILHACRKLVSQVLTHKEKKAYKLAIIGTGGIGKTTLAQKVFNDEKLKQSFDKHSWICVSQDYSPASILGQLLRTIDVQYKQEESVGELQSKIESAIKDKSYFLVLDDVWQSDVWTNLLRTPLYAATSGIILITTRHDTVAREIGVEEPHHVNLMSPAVGWELLWKSINIEDDKEVQNLRDIGIEIVQKCGGLPLAIKVIARVLASKDKTENEWKKILANYVWSMDKLPKEIRGALYLSYDDLPQHLKQCFLYCIVYPEDCTIRRDDLIRLWVAEGFVEVHKDQLLEDTAEEYYYELISRNLLQPVDTFFDQSECKMHDLLRQLACHLSREECYIGDPTSLVDNNMCKLRRILAITEKDMVVIPSMGKEEIKLRTFRTQQNPLGIEKTFFMRFVYLRVLDLADLLVEKIPDCLGNLIHLRLLDLDGTLISSVPESIGALKNLQMLHLQRCKYLHSLPSAITRLCNLRRLGIDFTPINKFPRGIGRLQFLNDLEGFPVGGGSDNTKMQDGWNLQELAHLSQLCQLDLNKLERATPRSSTDALLLTDKKHLKKLNLCCTKPTDEEYSEKGISNVEMIFEQLSPPRNLEDLMIVLFFGRKFPTWLSTSQLSSLTYLKLIDCNSCVHLPPIGQLPNLKYLKINGASAITKIGPEFVGC
More
|
|||||||
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsIR64_11g0024070 | OsIR64_11g0024070.02 | Chr11 | 29609109 | 29612387 | + | IsoSeq | ||
| CDS seq | CAATCACCGGGGAACTTGCTCGTCATCTTCCTCGCAATAGGCGATCGATTTGCCGGCTTGCCATGGCTGCACGCACCAAAGGCCTCGCTCTGGGGTGTCTTTCTTTCAATTCCTCGCAACATAGCATGTGCTTGCTTGGTTGTTGGGTCTGATGGAAATGTCGTCTTGCAATGCAGCAGACGCGCCCCATGCCGCTGCTGTTCC
More
|
|||||||
| Protein seq | QSPGNLLVIFLAIGDRFAGLPWLHAPKASLWGVFLSIPRNIACACLVVGSDGNVVLQCSRRAPCRCCS |
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.147908 | 0.045435 | 1.028058 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0676100 | RBH | 1.142762 | 1.287942 | 1.539014 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g44990 | RBH | 0.000000 | 0.000000 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0676100 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0023830 | RBH | 0.132260 | 0.000000 | 0.000000 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0023430 | RBH | 0.000000 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0023450 | RBH | 0.0 | 0.0 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0023140 | SBH | 0.000000 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0023430 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0422400 | SBH | 3.562198 | 32.2127905 | 0.011334 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0023970 | RBH | 0.036124 | 0.004755 | 0.026227 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0431800 | SBH | 0.0247405 | 3.3243495 | 0.4231555 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0023840 | SBH | 1.203734 | 0.746390 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0023840 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0023270 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0023070 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0023550 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G023610 | RBH | 0.000000 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0023730 | SBH | 1.486182 | 20.188963 | 5.723283 |
