Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsKYG_11g0004800 | OGI:11010520 | 16/16 | KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | Chr11:3552808-3554316 | ||||||||
| Gene Symbol | RLCK314, OsRLCK314, 25L2, Hwi1 | ||||||||||
| DNA seq | ATGGCTTATAACCGTCTAGAAGGCCATCTACCGAGTTCGTTAAGCAACTTTTCCGCTCATCTCCAACGACTTCATTTAGGAGGAAATGCAATATCAGGGTCTTTTCCCTCTGGCATAGAACACCTCTCAAACTTGATTGCTTTATCAGTAGGAACTAATGACTTTACTGGTACCCTTCCAGAATGGCTTGGAAATCTTAAACAGTTGCAAATGTTAAGTTTATATGACAACTATTTCACAGGGTTTATTCCATCATCCCTTTCGAATCTGTCTCAACTGGTAGCTCTCACACTACAATTTAACAAGCTGGATGGGCAGATACCAAGCTTAGGAAACCAGCTGCAAATGCTTCAAATATTCAATGTTTTGTACAATAATCTTCATGGTGTCATACCAAATGCGATCTTCAGTCTTCCGTCATTAATACAAGTTGACTTATCTTACAACAACCTACATGGACAACTTCCTATTGACATTGGCAATGCAAAACAACTAGTATCTTTAAAGCTTTCATCAAATAAGCTATCTGGAGATATTCTGAATGCTTTGGGTGATTGTGAAAGTCTTGAAGTCATCAGGTTAGATAGAAATAATTTTAGCGGGAGCATCCCCATGTCATTAGGCAACATAAGTAGCCTAAGAGTTCTCAATTTATCTCTCAATAACTTAACAGGGTCAATACCGGTATCTCTTAGCAATCTACAGTATCTTGAGAAACTAAACCTATCATTCAACCATCTTAAGGGCGAAATCCCAGCAAAAGGAATTTTCAAGAATGCTACAGCTTTCCAGATTGATGGAAATCAGGGGCTTTGTGGTGGGCCACCAGCCTTACACCTAACCACATGTCCTATTGTGCCATTAGTATCATCTAAGCACAATAACTTAATTTTACTGAAAGTGATGATCCCACTAGCCTGCACGGTGTCACTTGCTACAGTCATATCTATTATTTTTATTTGGAGGGCAAAACTGAAGAGAGAATCAGTATCGTTGCCATTTTTTGGTAGCAATTTCCCCAGAATTTCATACAATGCTCTTTTCAAAGCAACAGAGGGTTTCTCAACATCCAGTTTAATTGGCAGAGGGAGATATGGTTCTGTCTTTGTAGGGAAACTTTTTCAAGAAAACAACGTTGTTGCTGTGAAAGTTTTCAGCCTAGAGACAAGGGGAGCAGGAAAGAGCTTCATCGCAGAATGTAATGCCTTAAGAAATGTGCGGCATCGCAATATAGTTCCTATCCTCACTGCATGCTCTAGTATTGATTCTAAAGGCAATGATTTCAAAGCTCTAGTGTATGAGTTCATGTCACAAGGGGACTTATATAATTTACTATATACAACAAGACATGATAGCAACTCTTCAAAGTTGAACCACATTTCATTGGCTCAGAGGACAAGCATTGTGCTAGATGTATCAAGTGCATTAGAGTACTTGCACCATAACAACCAAGGAACTATTGTTCACTGTGATCTGAACCCTAGCAACATCCTTCTAGATAAAATATGA
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| CDS seq | ATGGCTTATAACCGTCTAGAAGGCCATCTACCGAGTTCGTTAAGCAACTTTTCCGCTCATCTCCAACGACTTCATTTAGGAGGAAATGCAATATCAGGGTCTTTTCCCTCTGGCATAGAACACCTCTCAAACTTGATTGCTTTATCAGTAGGAACTAATGACTTTACTGGTACCCTTCCAGAATGGCTTGGAAATCTTAAACAGTTGCAAATGTTAAGTTTATATGACAACTATTTCACAGGGTTTATTCCATCATCCCTTTCGAATCTGTCTCAACTGGTAGCTCTCACACTACAATTTAACAAGCTGGATGGGCAGATACCAAGCTTAGGAAACCAGCTGCAAATGCTTCAAATATTCAATGTTTTGTACAATAATCTTCATGGTGTCATACCAAATGCGATCTTCAGTCTTCCGTCATTAATACAAGTTGACTTATCTTACAACAACCTACATGGACAACTTCCTATTGACATTGGCAATGCAAAACAACTAGTATCTTTAAAGCTTTCATCAAATAAGCTATCTGGAGATATTCTGAATGCTTTGGGTGATTGTGAAAGTCTTGAAGTCATCAGGTTAGATAGAAATAATTTTAGCGGGAGCATCCCCATGTCATTAGGCAACATAAGTAGCCTAAGAGTTCTCAATTTATCTCTCAATAACTTAACAGGGTCAATACCGGTATCTCTTAGCAATCTACAGTATCTTGAGAAACTAAACCTATCATTCAACCATCTTAAGGGCGAAATCCCAGCAAAAGGAATTTTCAAGAATGCTACAGCTTTCCAGATTGATGGAAATCAGGGGCTTTGTGGTGGGCCACCAGCCTTACACCTAACCACATGTCCTATTGTGCCATTAGTATCATCTAAGCACAATAACTTAATTTTACTGAAAGTGATGATCCCACTAGCCTGCACGGTGTCACTTGCTACAGTCATATCTATTATTTTTATTTGGAGGGCAAAACTGAAGAGAGAATCAGTATCGTTGCCATTTTTTGGTAGCAATTTCCCCAGAATTTCATACAATGCTCTTTTCAAAGCAACAGAGGGTTTCTCAACATCCAGTTTAATTGGCAGAGGGAGATATGGTTCTGTCTTTGTAGGGAAACTTTTTCAAGAAAACAACGTTGTTGCTGTGAAAGTTTTCAGCCTAGAGACAAGGGGAGCAGGAAAGAGCTTCATCGCAGAATGTAATGCCTTAAGAAATGTGCGGCATCGCAATATAGTTCCTATCCTCACTGCATGCTCTAGTATTGATTCTAAAGGCAATGATTTCAAAGCTCTAGTGTATGAGTTCATGTCACAAGGGGACTTATATAATTTACTATATACAACAAGACATGATAGCAACTCTTCAAAGTTGAACCACATTTCATTGGCTCAGAGGACAAGCATTGTGCTAGATGTATCAAGTGCATTAGAGTACTTGCACCATAACAACCAAGGAACTATTGTTCACTGTGATCTGAACCCTAGCAACATCCTTCTAGATAAAATATGA
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| Protein seq | MAYNRLEGHLPSSLSNFSAHLQRLHLGGNAISGSFPSGIEHLSNLIALSVGTNDFTGTLPEWLGNLKQLQMLSLYDNYFTGFIPSSLSNLSQLVALTLQFNKLDGQIPSLGNQLQMLQIFNVLYNNLHGVIPNAIFSLPSLIQVDLSYNNLHGQLPIDIGNAKQLVSLKLSSNKLSGDILNALGDCESLEVIRLDRNNFSGSIPMSLGNISSLRVLNLSLNNLTGSIPVSLSNLQYLEKLNLSFNHLKGEIPAKGIFKNATAFQIDGNQGLCGGPPALHLTTCPIVPLVSSKHNNLILLKVMIPLACTVSLATVISIIFIWRAKLKRESVSLPFFGSNFPRISYNALFKATEGFSTSSLIGRGRYGSVFVGKLFQENNVVAVKVFSLETRGAGKSFIAECNALRNVRHRNIVPILTACSSIDSKGNDFKALVYEFMSQGDLYNLLYTTRHDSNSSKLNHISLAQRTSIVLDVSSALEYLHHNNQGTIVHCDLNPSNILLDKI |
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| Function | Receptor kinase-like protein Xa21 [UniProtKB/Swiss-Prot:Q1MX30] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKYG_11g0004800 | OsKYG_11g0004800.01 | Chr11 | 3552808 | 3554316 | + | NAM | ||
| CDS seq | ATGGCTTATAACCGTCTAGAAGGCCATCTACCGAGTTCGTTAAGCAACTTTTCCGCTCATCTCCAACGACTTCATTTAGGAGGAAATGCAATATCAGGGTCTTTTCCCTCTGGCATAGAACACCTCTCAAACTTGATTGCTTTATCAGTAGGAACTAATGACTTTACTGGTACCCTTCCAGAATGGCTTGGAAATCTTAAACAGTTGCAAATGTTAAGTTTATATGACAACTATTTCACAGGGTTTATTCCATCATCCCTTTCGAATCTGTCTCAACTGGTAGCTCTCACACTACAATTTAACAAGCTGGATGGGCAGATACCAAGCTTAGGAAACCAGCTGCAAATGCTTCAAATATTCAATGTTTTGTACAATAATCTTCATGGTGTCATACCAAATGCGATCTTCAGTCTTCCGTCATTAATACAAGTTGACTTATCTTACAACAACCTACATGGACAACTTCCTATTGACATTGGCAATGCAAAACAACTAGTATCTTTAAAGCTTTCATCAAATAAGCTATCTGGAGATATTCTGAATGCTTTGGGTGATTGTGAAAGTCTTGAAGTCATCAGGTTAGATAGAAATAATTTTAGCGGGAGCATCCCCATGTCATTAGGCAACATAAGTAGCCTAAGAGTTCTCAATTTATCTCTCAATAACTTAACAGGGTCAATACCGGTATCTCTTAGCAATCTACAGTATCTTGAGAAACTAAACCTATCATTCAACCATCTTAAGGGCGAAATCCCAGCAAAAGGAATTTTCAAGAATGCTACAGCTTTCCAGATTGATGGAAATCAGGGGCTTTGTGGTGGGCCACCAGCCTTACACCTAACCACATGTCCTATTGTGCCATTAGTATCATCTAAGCACAATAACTTAATTTTACTGAAAGTGATGATCCCACTAGCCTGCACGGTGTCACTTGCTACAGTCATATCTATTATTTTTATTTGGAGGGCAAAACTGAAGAGAGAATCAGTATCGTTGCCATTTTTTGGTAGCAATTTCCCCAGAATTTCATACAATGCTCTTTTCAAAGCAACAGAGGGTTTCTCAACATCCAGTTTAATTGGCAGAGGGAGATATGGTTCTGTCTTTGTAGGGAAACTTTTTCAAGAAAACAACGTTGTTGCTGTGAAAGTTTTCAGCCTAGAGACAAGGGGAGCAGGAAAGAGCTTCATCGCAGAATGTAATGCCTTAAGAAATGTGCGGCATCGCAATATAGTTCCTATCCTCACTGCATGCTCTAGTATTGATTCTAAAGGCAATGATTTCAAAGCTCTAGTGTATGAGTTCATGTCACAAGGGGACTTATATAATTTACTATATACAACAAGACATGATAGCAACTCTTCAAAGTTGAACCACATTTCATTGGCTCAGAGGACAAGCATTGTGCTAGATGTATCAAGTGCATTAGAGTACTTGCACCATAACAACCAAGGAACTATTGTTCACTGTGATCTGAACCCTAGCAACATCCTTCTAGATAAAATATGA
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| Protein seq | MAYNRLEGHLPSSLSNFSAHLQRLHLGGNAISGSFPSGIEHLSNLIALSVGTNDFTGTLPEWLGNLKQLQMLSLYDNYFTGFIPSSLSNLSQLVALTLQFNKLDGQIPSLGNQLQMLQIFNVLYNNLHGVIPNAIFSLPSLIQVDLSYNNLHGQLPIDIGNAKQLVSLKLSSNKLSGDILNALGDCESLEVIRLDRNNFSGSIPMSLGNISSLRVLNLSLNNLTGSIPVSLSNLQYLEKLNLSFNHLKGEIPAKGIFKNATAFQIDGNQGLCGGPPALHLTTCPIVPLVSSKHNNLILLKVMIPLACTVSLATVISIIFIWRAKLKRESVSLPFFGSNFPRISYNALFKATEGFSTSSLIGRGRYGSVFVGKLFQENNVVAVKVFSLETRGAGKSFIAECNALRNVRHRNIVPILTACSSIDSKGNDFKALVYEFMSQGDLYNLLYTTRHDSNSSKLNHISLAQRTSIVLDVSSALEYLHHNNQGTIVHCDLNPSNILLDKI
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.000000 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0173432 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g07140 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0173432 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0004880 | RBH | 0.073252 | 1.695642 | 1.332235 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0004930 | SBH | 0.145897 | 1.520357 | 0.670409 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0017770 | SBH | 0.164332 | 9.540369 | 4.595458 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0004840 | RBH | 0.216128 | 0.044515 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0004740 | RBH | 4.526733 | 0.899943 | 2.512842 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0060700 | RBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0004810 | SBH | 0.297846 | 0.021683 | 0.170285 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0061800 | RBH | 0.3220435 | 0.126046 | 0.0049055 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0004700 | RBH | 0.672407 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0004780 | RBH | 0.074646 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0004860 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0004800 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0004840 | SBH | 0.034522 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G004890 | RBH | 0.838538 | 0.000000 | 0.368926 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0004780 | RBH | 0.077848 | 0.0 | 0.0 |
