Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsIR64_02g0008990 | OGI:02020410 | 2/16 | IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | Chr02:6798297-6798758 | ||||||||
| Gene Symbol | RLK5, OsRLK5 | ||||||||||
| DNA seq | ATGGAGTTTGGTAGGTTGACACATCTGACTTACTTGTGGCTGTCAAATATGAATATTACTGGTGAAATCCTTGAAAACCTGTCCAGCCTCAGAGAGCTCAACCTCTTGGACTTATCATCGAACAAGATCCAAGGAAAAATTCCAAGGTGGATCTGGCAACATAAGAAACTTCATATTTTGTACCTGTATGCAAACAGATTCACCGGTGAGATTGAACCCAATGTCAAGATTGATGTTTCTTCAAACGAACTAACAAGAACAATACCAGATGGATTTGGTAAGATTACCAACCTTACCTTATTGTTTCTCTACTTTGACAAGCTGAGTGGATCAATACCACCAAGTGTTGGGCTGCTGTCAAAGCTTACTGACATTCGGTTATTCAATAACATGCTCTCTGGATCACTCCCACCAGAGCTTGGTAAAGCACTCACCACTGGCCAATCTTGTGATCTCCAATAA
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| CDS seq | ATGGAGTTTGGTAGGTTGACACATCTGACTTACTTGTGGCTGTCAAATATGAATATTACTGGTGAAATCCTTGAAAACCTGTCCAGCCTCAGAGAGCTCAACCTCTTGGACTTATCATCGAACAAGATCCAAGGAAAAATTCCAAGGTGGATCTGGCAACATAAGAAACTTCATATTTTGTACCTGTATGCAAACAGATTCACCGGTGAGATTGAACCCAATGTCAAGATTGATGTTTCTTCAAACGAACTAACAAGAACAATACCAGATGGATTTGGTAAGATTACCAACCTTACCTTATTGTTTCTCTACTTTGACAAGCTGAGTGGATCAATACCACCAAGTGTTGGGCTGCTGTCAAAGCTTACTGACATTCGGTTATTCAATAACATGCTCTCTGGATCACTCCCACCAGAGCTTGGTAAAGCACTCACCACTGGCCAATCTTGTGATCTCCAATAA
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| Protein seq | MEFGRLTHLTYLWLSNMNITGEILENLSSLRELNLLDLSSNKIQGKIPRWIWQHKKLHILYLYANRFTGEIEPNVKIDVSSNELTRTIPDGFGKITNLTLLFLYFDKLSGSIPPSVGLLSKLTDIRLFNNMLSGSLPPELGKALTTGQSCDLQ |
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| Function | Receptor-like protein 52 [UniProtKB/Swiss-Prot:Q7FZR1] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsIR64_02g0008990 | OsIR64_02g0008990.01 | Chr02 | 6798297 | 6798758 | + | NAM | ||
| CDS seq | ATGGAGTTTGGTAGGTTGACACATCTGACTTACTTGTGGCTGTCAAATATGAATATTACTGGTGAAATCCTTGAAAACCTGTCCAGCCTCAGAGAGCTCAACCTCTTGGACTTATCATCGAACAAGATCCAAGGAAAAATTCCAAGGTGGATCTGGCAACATAAGAAACTTCATATTTTGTACCTGTATGCAAACAGATTCACCGGTGAGATTGAACCCAATGTCAAGATTGATGTTTCTTCAAACGAACTAACAAGAACAATACCAGATGGATTTGGTAAGATTACCAACCTTACCTTATTGTTTCTCTACTTTGACAAGCTGAGTGGATCAATACCACCAAGTGTTGGGCTGCTGTCAAAGCTTACTGACATTCGGTTATTCAATAACATGCTCTCTGGATCACTCCCACCAGAGCTTGGTAAAGCACTCACCACTGGCCAATCTTGTGATCTCCAATAA
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| Protein seq | MEFGRLTHLTYLWLSNMNITGEILENLSSLRELNLLDLSSNKIQGKIPRWIWQHKKLHILYLYANRFTGEIEPNVKIDVSSNELTRTIPDGFGKITNLTLLFLYFDKLSGSIPPSVGLLSKLTDIRLFNNMLSGSLPPELGKALTTGQSCDLQ |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0227700 | SBH | 0.225641 | 0.312676 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g12910 | SBH | 0.164886 | 0.396880 | 0.191521 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0227700 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0004310 | SBH | 0.053326 | 2.659473 | 0.663938 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0008630 | SBH | 0.0 | 0.0 | 0.188894 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0008430 | SBH | 0.369193 | 0.439994 | 0.324075 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0004250 | SBH | 0.061636 | 0.022630 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0004280 | SBH | 1.714308 | 1.291915 | 1.010436 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0056900 | SBH | 0.077009 | 0.213037 | 0.6367415 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0019080 | SBH | 0.047072 | 0.639242 | 0.192520 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0118500 | SBH | 0.645206 | 4.2648105 | 0.462081 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0004550 | SBH | 0.022579 | 0.127643 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0009080 | SBH | 0.000000 | 0.000000 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0009380 | SBH | 0.000000 | 3.606083 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0020740 | SBH | 0.000000 | 0.052192 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0004290 | SBH | 0.032945 | 0.534010 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G004740 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0009150 | RBH | 0.0 | 0.0 | 0.0 |
