Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsCMeo_11g0023440 | OGI:11080510 | 5/16 | CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | Chr11:27040425-27055948 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | atcatgtgcccaaaagctgcaggatgtcattatggaggaggcaattctggttctaggggtaaaagaagaactccgagaactacagcgaagaatgtatcaaatacaatgctttcttaatgatgttgagcaaaagaggacagaggagtcatctgttaataactggcttcgtaatctgaaagatgccatgcataatgctgatgatattgtagacttggctaggttcgaaggaagcaagcttgtcgaaacatgaattcggcaataataaaacggggtagcgcacgagacctaaaagtggatggatgcagagacaaaggatttagacaggttcaggccctctcaatgagaggtaataccctactcctgtttggggatttgaatccgccgggtgtgtattgatctgacgatcaagttgtctcatgcccctagagggggctccctgcccgccttatataggttggggggcagggttacaagatagaaaccttaaccaatacggtatcggtttcctaaatctactttacaatcttatcaaaccaggactttaggccgttccataatatacagggaaacgtaatacccaagtcatgatctgttacatatttcatatatataagttatcccctataactagtcggataaccatgccgtgtgggtatggggtacccataatctccacagtagcccctgagaccttcacagtcagaaagataatcttctctcgaactagattactccaaagccgagtgcttcaatcatcttcgccatgatctcccgagtacttttaccaaatctgaagactgtggagggctgaaaaataaagtcaggtgcatcgaatagatgcacctaataggtgtagcccccgactatgtggttaattgaaccaaccaaacatatagtcaaggaataaataatctaaccaaccgagtggttttgataattgtaatcaaccaagtgacttaatatcaatatatagcatatgcggtgtgaatccccgaataatatgatccaagtgatataccgactgcttggcaaaatatgatgcgtacaacctaaagttgacaacatctttgaaagttcacatagcaaaacagctataaagaagcttgtatgttgtgaataaataaatttccaaagtattgggcatacgccatgcgcacactgctttaacagacgtgctttagtccctaaaagacacatggtttcaccacacctggaaatatatagcatatgtggtgtaaaatccgagtaaataaactcataaaggatttaccaaccgcctagaaaatgaccacaatatataatcagcctaagccataatattggtcaataaaaatgcacacttacgtggcaaaaagcaatgatattgtatccaatcaattgcttaataaacccaaatagcaccatgacttatataaaaaagtcagcgggacagctatataatgctttactgtttgacaccttttaagatgcattgtaccaactcctaaaaagttgagtaactgcggtataaaaggattttaaggtattgggcacttgatcacgcgcactttggcctaagcaaaaagtgcctaagtccctaaaagaacgtgacaggccacacctgaaaatatgggctgcagacatattaggcctaggccaaaaaatatgccttcgacaccctttaaaggatgacgcatataacatgctcccgagtaataaatcttccgggtaatatagaccaagtgtagctcatacgaatagcttctgatctgaatgattatcccttatggaatactccaaaataaatataataattgaatcccgactggcgcaagtattcggttgataacccttacggggaataataaatagtccagtctttgagcatagaaaatagactcatgactatgaatccatgtggaatgtatccggaacaagtccaaattggagatataatcctcacgcttgagttgatgagcccctgagcatatagcttgtccttatggagatgatatcacccataaaagctaacgaagatgttggtggtggtaaagacaatgacaccaatcaaaggtgatgaagttgcatagccgtggaggcgaagaaactagtcggcagcagataagtcagtcagcgatgaagatgaaggcgcccagcgataaagttgtgtagccatggtgacgaaataatcagtcgatgacagacgagccagcagtcggtgacaacgagaacaaaccgacaatgaagacatagacgcacaccaacagcgatggcgaaatccatcaatcatgaagatgaagaaaatagtcggcgacgacaaacgcaaccgacagtaatgatgataagcagcaatcatagatgatcgactatgatgacgaagttgcccatcaaacagcagtagaataggctatgttgaagaggcttgacaggatattgatgaagatgacgatgttggtaatccagtcaatagcgatgtagcagccgatgataatgatgaagacgctcatcggcaataatagatcaaccgtgaaggtgaaataataagtcggcgaaaacataatcatccattagcaacagcggagatatcagggccgatgaagcagaggtgctggtgatgatgtcagtgacaataatccatcaaattaatgttatggctgttgtagatgcttcacttggaggagagttgatgttgttgtctaactcgtccaaaccgaaatatttgaagttgttgaagtagaatgtctgctccgaatcaaagatgaagataatgactcctggagttgactcgttggttgatgaattgatttcttcagcttgacataaaatttgtcaaattttgagccttatatttgtgtagcccccgactctttggttagttgggaaagaactgaacatagagtcgagaattatagcttcttgtcgtcgagtagtcattgcttgattgaagatatgtgttgaagatgtccaagtagaaatcctgaatattggagagccacttgttgtagtaaaataacatggcattgcatgccgagatgtcgaggttcacaaagacgtcgtgattggtgaagtagtaaaacttgcgaagtagcaacaatagagtttgccggtgccgaggataataaagatgaagtcgctccaccatgatgacaaagttgtattgccgtaatgaagtgaacacaagtcggcggcaacagaagcaaaccggtagtgaagacgcgcagttgtgaagataaaagcaccagtcggcggcggcataaccagtcggcgacggaagatgatgatgtccatcagtagtggtagctgtataaaccagacgtagaggcgagggtactagtcagcagcagacgagacgaccggcgatgaagatggtaaggccaatcaacactggcagaatcatgcagccatggaagtaaagaaaccagtcggcagccatggcaaacgtaggcagcttgtgttgaagatactgatgcctattagtagtgacagcgatgtagccagccgtgaagaagatagcatcagttggcattataacaggccagccgtgcaggcggtgacaccagtcagcggcggatgcggcggccggtcggtgaagacatagacgctcaacaacggcagcataataggccagccgtgcaggcggaaacaccagtcggcggcggtcgaggcggccggtcggtgaagacgtagacgcccaacaacggcggcataaaggccagccgtgcaggcggaaacaccagtcggcagcggcgaaggcaagccggtcggtgaagacgtagacgcccaacaacggcggcataaaggccagccgtgcgggcggaaacaccagtcggcggcggcgaaggcggccggtcggtgaagacgtagacgcccaacaacggcggcataaaggacagccgtgcaggcggaagcaccagtcggcggcggacgaggcggccggtcggtgaagacgtagacgcccaacaacggcggcataaaggacagccgtgcaggcggaaacaccagtcggcagcggcgaaggcaagccggtcggtgaagacgtagacgcctaacaacggcggcataaaggccagccgtgcaggcggaaacaccagtcggcagcggcgaaggcaagccggtcggtgaagacgtagacgcccaacaacggcggcataaaggccagccgtgcaggcggaaacaccagtcggcggcggcgaaggcggccggtcggtgaagacgtagacgcccaacaacggcggcataaaggccagccgtgcaggcggaagcaccagtcggcggcggacgaggcggccggtcggtgaagacgtagacgcccaacaacggcggcataaaggccagccgtgcaggcggaaacaccagtcggcagcggcgaaggcaagccggtcggtgaagacgtagacgcccaacaacggcggcataaaggccagccgtgcaggcggaaacaccagtcggcggcggcgaaggcggccggtcggtgaagacgtagacgcccaacaacggcggcataaaggccagccgtgcaggcggaagcaccagtcggcggcggacgaggcggccggtcggtgaagacgtagacgcccaacaacggcggcataaaggccagccgtgcaggcggaaacaccagtcggcggcggacgaggcggccggtcggtgaagacgtaaacgcccaacaacggcggcataataggccagccgtgcaggcggaaacaccagtcggcggcggcgaaggcaagccggttggtgaagacgtagacgcccaacaacggcggcataataggccagccgtgcaggcggaaacaccagtcggcggcggtcgaggcgagccggtggtgatgttctgactgatccattcctggagcgtaagagataagcttaaagccatgaatcccttttatgcatatctggatctggatcctgcagaacaaacatataggatgagtagtatctgatataaatataatactcgagaaaaaatcaagtattttaaaatatttataaatatgtatttctcctcttgtcaattttgatttccccgagcagatgattcattacgtttaaacgctctgtccgactagtcatagcccccaagcaccgggagtcggcctaggcacttcccagacatgcatatgagtgacatgagttcgccattaatggaacaaagtttcacgaatcagaatttactactcgggtacttttgcaattattaagagcagaaaataaattatcttatctctatgcttttgatttattccgaataatacttagcaccttgcgttactcggtccatccaacgagcccccgggtgctaggaatcggcccaaaggcaaccatccattggcaaaccaaacggaaagcataggaagatagaactccataactcgataggtacttttgtactcagattgtgtcgcaagcaatcaagataaatattatgaaaattgtttaaaaaatacgatataacatctatagcccccgactcactagtcaacggcgaaccagttgatgtagtgaggcaaaggaaaagacaaaatatcatataaagaataaaataaatgatgacttagctttgtcgtattccctcgatgacagcagaagtagccgatgtgggaataaagcagtccatcaatggtgacaaaaaacaccagtcggcgccagtggaaccaagccagtggtgtagatgatgaagcccattaacaacggcggagtccgccaaccgtataggcaaaaacaccagtcggcggcggcgaaggccagccggtcggcgaagacgtggacgcccatgaacggtggtgtgaccaaccaaccgtataggcgaggacaccagtcggcggcgacggaggcaggccggcgatgaagtcgtggacgcccatgaacggtggtgtgaccaaccaaccgtataggcggggacaccagtcggcggcgacggaggcaggccggtggtgaagtcgtggacgcccatgaacggtggtgtgaccaaccaaccgtataggcggggacaccagtcggcggcgacggaggcaggccggtggtgaagtcgtggacgcccatgaacggtggtgtgaccaaccaaccgtataggcgaggacaccagtcggcggcgacggaggcaggccggcggtgaagacgtagacgcccaacaacggtggtgtgaccaaccaaccatataggcgaagacaccagtcggcggcgacggaggcaggccggcggtgaagacgtagacgcccaacaacggtggtgtgaccaaccaaccgtataggcgaggacaccagtcggcggcgacggaggcaggccggcggtgaagacgtagacgcccaacaacggtggtgtgaccaaccaaccatataggcgaagacaccagtcggcggcgacggaggcaggccggcggtgaagtcgtagacgcccaacagcggcggcataataggccagccgtgtaggcggaggcaccactcggcggcgacggaggcaggccggcggtgaagtcgtggacgcccaacagcggcggcataaaggccagccgtgtaggcggaggcaccaatcggcggcgacggaggcaggccggcggtgaagatgtagacgcccaacagcggcggcataataggccagccgtgtaggcggaggcaccactcggcggcgacggaggcaggccggcggtgaagtcgtggacgcccaacagcggcggcataaaggccagccgtgtaggcggaggcaccaatcggcggcgacggaggcaggccggcggtgaagatgtagacgcccaacagcggcggcataataggccagccgtgtaggcggaggcaccactcggcggcgacggaggcaggccggcggtgaagtcgtggacgcccaacagcggcggcataaaggccagccgtgtaggcggaggcaccaatcggcggcgacggaggcaggccggcggtgaagtcgtagacgcccaacagcggcggcataataggccagccgtgtaggcggaggcaccagtcggcggcgacggaggccagccggcggtgaagtcgtagacgcccaacagcggcggcataataggccagccgtgtaggcggaggcaccaatcggcggcgacggaggcaggccggcggtgaagtcgtagacgcccaacagcggcggcataataggccagccgtgtaggcggaggcaccactcggcggcgacggaggcaggccggcggtgaagtcgtagacgcctaacagcggcggcataataggccagccgtgtaggcggaggcaccactcggcggcgacggaggcaggccggcggtgaagtcgtagacgcccaacagcggcggcataataggccagccgtgtaggcggaggcaccactcggcggcgacggaggcaggccggcggtgaagtcgtagacgcctaacagcggcggcataataggccagccgtgtaggcggaggcaccactcggcggcgacggaggcaggccggcggtgaagtcgtagacgcccaacagcggcggcataataggccagccgtgtaggcggaggcaccactcggcggcgacggaggcaagccggcggtgaagtcgttgttgctatcagcaatggcggtggcgaggacaagccggcggagtggactcgcggccgatcgaccggaaagctgagacgcctcgagtccatgaccagcatcaatcgcctcaatagtgccgcgtagttatatgcgaacaacaacaaaaaatagcaagaaattaatctgagattagaaatcaatctaatatatattgattattgacaacaaattgaaacgaaaaaactcaagtcgagcagtgaggctggatcgtgagtgatagccggcgacgcgccatgcaacatgtataagccccggcagctaactgctaactcgatgttccgattaaagatttgagccgtcgaaattgatgagattgatctccgggcttcttcggaagttgattccatcgcacttttcgacaggtaattcgacgcagcccctacctggcgcgccaactgtcgaaacatgaattcggcaataataaaacggggtagcgcacgagacctaaaagtggatggatgcagagacaaaggatttagacaggttcaggccctctcaatgagaggtaataccctactcctgtttggggatttgaatccgccgggtgtgtattgatctgacgatcaagttgtctcatgcccctagagggggctccctgcccgccttatataggttggggggcagggttacaagatagaaaccttaaccaatacggtatcggtttcctaaatctactttacaatcttatcaaaccaggactttaggccgttccataatatacagggaaacgtaatacccaagtcatgatctgttacatatttcatatatataagttatcccctataactagtcggataaccatgccgtgtgggtatggggtacccataatctccacaaagctactagcacagagtcctttgttgccatcttcatcatcaagaaacttaactggatgtactggcctttcgattttctcttgccttcctactattcggcggcgccatgagatcgctatccggattagagacttcaatgctgaacttgacaagattttaaagcttggtaaaacgctttttaagattaggacaccgcctgcacaagttccgagtgtgaagcaaaagaaaacatgccaacttgtggaacctaatcttgtagggaaggaaattttacaggcttccacacgattggtagaactgcttcttgcacacaaggaaaagaagccctacaagattggtattcttggaacaggagggattggaaaaacaactctagctcaaaaaatatataatggccacaaagtaaaagaaacctttagcaagcgtgcttgggtttgtgtatctcagacgtattctgaagatgaaattttgaaagaaattctaaatggttttgaggtacatcaagagcagggtgaaactttcggaaagctcataagtaagcttgctaaagccgttgaagggacatgtttcatgattgttttggatgatgtttggcatcatgatgtgtggactaatctactaaggactccattaaatgctgctgcttctggagtaattatagttacaagtcgacatgacacagtgccacaggtaattggggtggattatgtgcatcgagttaaattgatgtcaaaagacctagcatgggagctactttggaagagtatgaatattaatgaagagaaagaagtgcaacacctaaaagatattgggatggagatcgtttctaaatgtggccaccttcctctcgcaatcaaagttactgctagtgttctagcaactaaagatagaactgagaggcattggagaaaggttataaacaaaagtgcttggtttatggacaagcttcctgataatctcagaggagctttgtttctgagttatgacgagctatcacggcagctgaagcaatgttttctctattgtgtgttgtttccagaagattctaaaatgttccgtgatgatttgattaggtgttgggttgctgaaggttttgtggaagaacaagatgggcaacttctagaagagacagccgaagaatattacgacgagttgatacataggaatctccttcaaccaacatgtagatgttttgaccatcatttagtaagaatgcatactcttttaagacagcttgctcaacatttgtcaggagatgaaattttttgtggagacacaaaatcactggagacaaaatctttgtcgaagatacaacgagttacaatatttactgaaaaagattatctagtaatccctgatgtaggcaaggagcggactatgagaacaaggactttgactattagagatgccaagttaccaagagttgaagacacaatcttcaaaagatttccacatattcgagttctggatttgactggttcaaaattacagtgcattccaagttgcattggagatttgatccatctacgattggttgatcttgatcagactgacatatcttgtctcccagaatccattggttgtcttcaaaacctacagatattgaacttgcaacgctgtggtgccttacatagtcttcctttggccatcaccaaattgagaaatctaaggcggctcggtcttaatggtacaccaataaatgaggttccaaaagggataggcaaattgaaattcctcaatgatttagaagcatttccaattggtagaggaagtgagactgctaatgttcaagatggctggattctggaagaattgggtcctctttcacagctgcggcagctccatatgatcaaacttgagggagcggctcctccttgcagcagcagagattcattgctaacagacaaaaagcatctcaaatttctagagctgtgctgcagtgaaccaacgaatgaagcatacactgtggaagatgttagcaatattggcaagatctttgaggagctaacccctccgcgcaatctggaagagctagttattttgggattctttggttggaggtaccctacatggctagatacaacccatttgtgttcactgaaactcctgaaactcgaggcgtgcagattctgcgagcaacttcctccactcgggcagctacccaacctggcatgcctacaaattgcgggtgcaaccactgtcaccaagattggacctgaatttcttggctttggggtgctgggtaatcttggatccacagaagatgtagttgcctttcccaaacttgaatacttgaccatcaggtgtctgcccaactgggacgaatggtcctttttcagcgaagaagaagaagaaaatgttgctgctgctgccgttgttgctcgtccaaggaagcagcggctgctgccatgcttgaatgtgttaatccttgaacactgccccaaactgaggggtctcccacgacagcttggaagggaggccgtaagcttgacggacctcattataagagaagcaaaatccacgaagatggtggaagacctcccattcctttctgattgtctttcgatcgaaggatgtgaagcccttgagagggtctccaacattccccaagtgagagagctgcatttacatggctgtccaaactttaagtgtgttgaggatgtgagcaatcttcagggattatgcgtggatgaatcaattaaagagatccctagtgttcttgggcttctagagaaaggctggtgtggagacgagctggatgttcacgtggtgcgtaatcttgagaaacgaggtatgctactattattacacgaacacatgcttaattaattcgtgtgtgtctggagtagttggttatattatctgaatttcgcaccccttgaagtcatcggattgtgcatttcttccttagtttctactcctggtgtacaggcgttgctatcatctcataacctccttagttattgcttaggtcgagcgttgatactttagattattcgttagtttctattatatactaaaagtttattaaacttcctacaaacgttctcaagttgtcacatggcgttttaaaaaaaataaaaaaattctaataaattctaagaaaaaatcaaaacatctatttttgattttcacttaagttggtggacctactatttttagccgttgatgttcaatctaaacaaatcatgtgatgctctaaaaaatagagaaattctaaaaaaaaaagcaaaacatctgacctttaattttcacttaagttggtggacccactattttcagccgtgagatcaatctaaacaaatccttccacctattatatccataaaacatcctataaatgtttttaattcgtcacattctataagcgctcggtgatccattattttagtatattagatcaactaataattataaataactcaaactgatggatcaaatagatctattaaaaaacaaaatcttctcccattggtagtatcgtacaggcgcacacgtgcgttactccctcccttggacctcatctctccttgcctctttccctttttctttatacatggtagttaagatttttcttcttaacctaatttcttcacttctagaggctaaatgggtcgggcgtggctgtggactttgggccgtataacccatgaatatatacagggatgattaatgatttgatgtttttataaactattaaacgatgtattttttactaataatttaaaagaaaaataatcaatagttagatagtaaatgatcatagtaatatctaatttttaatttatttgaactgttgtttttataattagatatataaataaattaagatctatattactatattttactatataaaaaatttaaatacataatttgaatagacatctcttctttgcatggcaaccaaataacatccgatttttaatttgtttgaaatgttcttttgtttagttttattcataactaaataagaaaatcaggatctacattactcatatttttctatataaaattggaaatacataatttgaacatagaccaacaaccaaacaacaatgaaaacactaaaaaaactgacagtaggtattatgtcatcctaaattattctatataataaaaattagaaaaatatggagtcactatgtgtcatattttagagcgcttttaagtcactatatgtcacttttaaaaaattagaaaaaacttagaaattaaaaggaaaacacaaaacattttatcattggttttcacttaaaaatgttttcagccattaaatctacttttagaaaaatcataacctgtgatgtctcacagcttaaaaattagaaaagaaatatagaaatctgagaaaaaaagcatttgatcatcaactaaatcatttagaaaaaaagagtcccctccatccccctccccccaaccttcgcaaagcactacccaccttttcctttccctttgtggctggagcctatgctcttcactcctctcccctcactatttttttagctatcaaactgaaagaaacaatcaataattataaaattataattataagttatatgtatgatttcaaatctaattttttgagtcaaaccagcaatgtaagattcatgtgcctatattatactatataagaaataaaagatttgggcatagttgacccatgcacttcgcacgtattccaaatagcaacaaaatattataaaaagttatcaacatatattatgtcattatacaccacaccactatacaaacatacatggctaaactctactaattgtatgcaaacaagcattataaatccaagtacagaacattaatttttattgatggaaaacacacttgtcctttgatatgttatccaaataataaaaaacgatgaaataattcaacaacacaggttgcactgtcatatattattttgcaaacatgcaaaaataaattagatatacaatgactaagaaacaaatagctcacatataaatagtccaagccatcaagtaaaaatttcggaggaacacacaccattggtcttttacatgtcaaccgaattacaattaaaaaatatgaaataattcaacaacacatgttgcattagcgtactttttttttttgcaaacatgcatatctacattaagaaaaaaaaactactaactcatatataaatagtctaaaccactttataaaaatccggtgccttcataattttcttgaaattagtatgctcaaataatctgagcaagacaaattatctttcatgtaagtgctctcaactatattatattaccatctaatcaactttaggtagtatttaatgcaattttattatatcatggatagatattcaagcggcattcataatacaccacacttcaaaaataataatgcatgcgaaattatatttaaccattgcatcattttttaagtgctttgatgttaatgaatttttctctatcctacgccatggcattatgaatttttccaaaaattattgcatatataagttatactaaggtagcaggtaccaggtagcagtatatagtcggtttaaaagttatatttcttactattagatttcaattttaagattcatgttgattagtttttttttaaaaaaaaatacaccatatatcacacatatcgtagggaagcaagacctaggatatgtatatctcctctgtgtctattgattatgtaagtatgtaataaattacatcaatataaaccaaataaaaggaggtctagcatgatggcataaataaaacatatttattatcttattgtatggtataaagctaactaattggttagaaaaattataggcaatgatgacgaaaaattgtacagagaaattgttttcgaagcgtgataggtgttctacggttaatatttcatcctgataactatatgtatctcaaaccccatcttaagatgcgtgcccatgcgaatgcatgggttaccttcttagtttccaaaaattatgccgtgcacacggttttcataaaaaaaaagatacttatcgttttggacaatgacacagtttctaaaaaacatctttaaccactattctattataatatatataaaaatatcaccaaatatatggtttattgaagtattttttaagactaatctatacatatgatctccatatttctaagacaaatatttttcaaattatttatatgaaaaaattttaaagtttgacatcaatcatattcaaaacgaaaagtattaccaacgtgaagagggtaatattaccaattgtaatacttatcgttttggataagtctgatatcaaacttcaaaatattttcatatagataatttgtaaatttgatcctctcattgtcatattaacatctccgtgcaaattcctactaaagtatactcctacataagtaacataagcctagcgatattaatgcaattaaaagaaaagaagtctgcattactactctgtatgccaatataattaattaatatatgtatatttttttactgaaggagcgggaaaattaaaaaacttagctagccgcccatcagagctagctagttgagtttctggtagtagctgaaggtcaatttgttacatgcattaaaaacctttgatgcgagtggcgagtgagttatatacgagtgttatgcttatgcatgtgctcatgtaggacttataggagatatatctttcagttggaaacaacaagcgacatgtcaatttctcatggcaatgttttccagtggcaatagaacaggcctacatacaagtcattttagacctgagcaaaattatacaggccagtcctagcctgatgtcacaaatttaggcttgcgacctatgtggtggcttgctagctagtgaacatggaggaggcatgcccaacatatataacacgtcctttattttttctctctaatgattgtttggtaggattaattgcacaaaatatgaaggttacaaaactgacgatgcgtatatttgtttttcattgattaatttcttaaattacaaagtttcttactttttagccatacttattttaattgtgtgctcctgtattttgtaggttgttaatcctgaagacatgacgcactgtgcgcaggcatccattgtatcgaattaa
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| CDS seq | atggaggaggcaattctggttctaggggtaaaagaagaactccgagaactacagcgaagaatgtatcaaatacaatgctttcttaatgatgttgagcaaaagaggacagaggagtcatctattaggacaccgcctgcacaagttccgagtgtgaagcaaaagaaaacatgccaacttgtggaacctaatcttgtagggaaggaaattttacaggcttccacacgattggtagaactgcttcttgcacacaaggaaaagaagccctacaagattggtattcttggaacaggagggattggaaaaacaactctagctcaaaaaatatataatggccacaaagtaaaagaaacctttagcaagcgtgcttgggtttgtgtatctcagacgtattctgaagatgaaattttgaaagaaattctaaatggttttgaggtacatcaagagcagggtgaaactttcggaaagctcataagtaagcttgctaaagccgttgaagggacatgtttcatgattgttttggatgatgtttggcatcatgatgtgtggactaatctactaaggactccattaaatgctgctgcttctggagtaattatagttacaagtcgacatgacacagtgccacaggtaattggggtggattatgtgcatcgagttaaattgatgtcaaaagacctagcatgggagctactttggaagagtatgaatattaatgaagagaaagaagtgcaacacctaaaagatattgggatggagatcgtttctaaatgtggccaccttcctctcgcaatcaaagttactgctagtgttctagcaactaaagatagaactgagaggcattggagaaaggttataaacaaaagtgcttggtttatggacaagcttcctgataatctcagaggagctttgtttctgagttatgacgagctatcacggcagctgaagcaatgttttctctattgtgtgttgtttccagaagattctaaaatgttccgtgatgatttgattaggtgttgggttgctgaaggttttgtggaagaacaagatgggcaacttctagaagagacagccgaagaatattacgacgagttgatacataggaatctccttcaaccaacatgtagatgttttgaccatcatttagtaagaatgcatactcttttaagacagcttgctcaacatttgtcaggagatgaaattttttgtggagacacaaaatcactggagacaaaatctttgtcgaagatacaacgagttacaatatttactgaaaaagattatctagtaatccctgatgtaggcaaggagcggactatgagaacaaggactttgactattagagatgccaagttaccaagagttgaagacacaatcttcaaaagatttccacatattcgagttctggatttgactggttcaaaattacagtgcattccaagttgcattggagatttgatccatctacgattggttgatcttgatcagactgacatatcttgtctcccagaatccattggttgtcttcaaaacctacagatattgaacttgcaacgctgtggtgccttacatagtcttcctttggccatcaccaaattgagaaatctaaggcggctcggtcttaatggtacaccaataaatgaggttccaaaagggataggcaaattgaaattcctcaatgatttagaagcatttccaattggtagaggaagtgagactgctaatgttcaagatggctggattctggaagaattgggtcctctttcacagctgcggcagctccatatgatcaaacttgagggagcggctcctccttgcagcagcagagattcattgctaacagacaaaaagcatctcaaatttctagagctgtgctgcagtgaaccaacgaatgaagcatacactgtggaagatgttagcaatattggcaagatctttgaggagctaacccctccgcgcaatctggaagagctagttattttgggattctttggttggaggtaccctacatggctagatacaacccatttgtgttcactgaaactcctgaaactcgaggcgtgcagattctgcgagcaacttcctccactcgggcagctacccaacctggcatgcctacaaattgcgggtgcaaccactgtcaccaagattggacctgaatttcttggctttggggtgctgggtaatcttggatccacagaagatgtagttgcctttcccaaacttgaatacttgaccatcaggtgtctgcccaactgggacgaatggtcctttttcagcgaagaagaagaagaaaatgttgctgctgctgccgttgttgctcgtccaaggaagcagcggctgctgccatgcttgaatgtgttaatccttgaacactgccccaaactgaggggtctcccacgacagcttggaagggaggccgtaagcttgacggacctcattataagagaagcaaaatccacgaagatggtggaagacctcccattcctttctgattgtctttcgatcgaaggatgtgaagcccttgagagggtctccaacattccccaagtgagagagctgcatttacatggctgtccaaactttaagtgtgttgaggatgtgagcaatcttcagggattatgcgtggatgaatcaattaaagagatccctagtgttcttgggcttctagagaaaggctggtgtggagacgagctggatgttcacgtggttgttaatcctgaagacatgacgcactgtgcgcaggcatccattgtatcgaattaa
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| Protein seq | MEEAILVLGVKEELRELQRRMYQIQCFLNDVEQKRTEESSIRTPPAQVPSVKQKKTCQLVEPNLVGKEILQASTRLVELLLAHKEKKPYKIGILGTGGIGKTTLAQKIYNGHKVKETFSKRAWVCVSQTYSEDEILKEILNGFEVHQEQGETFGKLISKLAKAVEGTCFMIVLDDVWHHDVWTNLLRTPLNAAASGVIIVTSRHDTVPQVIGVDYVHRVKLMSKDLAWELLWKSMNINEEKEVQHLKDIGMEIVSKCGHLPLAIKVTASVLATKDRTERHWRKVINKSAWFMDKLPDNLRGALFLSYDELSRQLKQCFLYCVLFPEDSKMFRDDLIRCWVAEGFVEEQDGQLLEETAEEYYDELIHRNLLQPTCRCFDHHLVRMHTLLRQLAQHLSGDEIFCGDTKSLETKSLSKIQRVTIFTEKDYLVIPDVGKERTMRTRTLTIRDAKLPRVEDTIFKRFPHIRVLDLTGSKLQCIPSCIGDLIHLRLVDLDQTDISCLPESIGCLQNLQILNLQRCGALHSLPLAITKLRNLRRLGLNGTPINEVPKGIGKLKFLNDLEAFPIGRGSETANVQDGWILEELGPLSQLRQLHMIKLEGAAPPCSSRDSLLTDKKHLKFLELCCSEPTNEAYTVEDVSNIGKIFEELTPPRNLEELVILGFFGWRYPTWLDTTHLCSLKLLKLEACRFCEQLPPLGQLPNLACLQIAGATTVTKIGPEFLGFGVLGNLGSTEDVVAFPKLEYLTIRCLPNWDEWSFFSEEEEENVAAAAVVARPRKQRLLPCLNVLILEHCPKLRGLPRQLGREAVSLTDLIIREAKSTKMVEDLPFLSDCLSIEGCEALERVSNIPQVRELHLHGCPNFKCVEDVSNLQGLCVDESIKEIPSVLGLLEKGWCGDELDVHVVVNPEDMTHCAQASIVSN |
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| Function | Putative disease resistance protein RGA4 [UniProtKB/Swiss-Prot:Q7XA39] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_11g0023440 | OsCMeo_11g0023440.01 | Chr11 | 27040425 | 27055948 | + | NAM | ||
| CDS seq | atggaggaggcaattctggttctaggggtaaaagaagaactccgagaactacagcgaagaatgtatcaaatacaatgctttcttaatgatgttgagcaaaagaggacagaggagtcatctattaggacaccgcctgcacaagttccgagtgtgaagcaaaagaaaacatgccaacttgtggaacctaatcttgtagggaaggaaattttacaggcttccacacgattggtagaactgcttcttgcacacaaggaaaagaagccctacaagattggtattcttggaacaggagggattggaaaaacaactctagctcaaaaaatatataatggccacaaagtaaaagaaacctttagcaagcgtgcttgggtttgtgtatctcagacgtattctgaagatgaaattttgaaagaaattctaaatggttttgaggtacatcaagagcagggtgaaactttcggaaagctcataagtaagcttgctaaagccgttgaagggacatgtttcatgattgttttggatgatgtttggcatcatgatgtgtggactaatctactaaggactccattaaatgctgctgcttctggagtaattatagttacaagtcgacatgacacagtgccacaggtaattggggtggattatgtgcatcgagttaaattgatgtcaaaagacctagcatgggagctactttggaagagtatgaatattaatgaagagaaagaagtgcaacacctaaaagatattgggatggagatcgtttctaaatgtggccaccttcctctcgcaatcaaagttactgctagtgttctagcaactaaagatagaactgagaggcattggagaaaggttataaacaaaagtgcttggtttatggacaagcttcctgataatctcagaggagctttgtttctgagttatgacgagctatcacggcagctgaagcaatgttttctctattgtgtgttgtttccagaagattctaaaatgttccgtgatgatttgattaggtgttgggttgctgaaggttttgtggaagaacaagatgggcaacttctagaagagacagccgaagaatattacgacgagttgatacataggaatctccttcaaccaacatgtagatgttttgaccatcatttagtaagaatgcatactcttttaagacagcttgctcaacatttgtcaggagatgaaattttttgtggagacacaaaatcactggagacaaaatctttgtcgaagatacaacgagttacaatatttactgaaaaagattatctagtaatccctgatgtaggcaaggagcggactatgagaacaaggactttgactattagagatgccaagttaccaagagttgaagacacaatcttcaaaagatttccacatattcgagttctggatttgactggttcaaaattacagtgcattccaagttgcattggagatttgatccatctacgattggttgatcttgatcagactgacatatcttgtctcccagaatccattggttgtcttcaaaacctacagatattgaacttgcaacgctgtggtgccttacatagtcttcctttggccatcaccaaattgagaaatctaaggcggctcggtcttaatggtacaccaataaatgaggttccaaaagggataggcaaattgaaattcctcaatgatttagaagcatttccaattggtagaggaagtgagactgctaatgttcaagatggctggattctggaagaattgggtcctctttcacagctgcggcagctccatatgatcaaacttgagggagcggctcctccttgcagcagcagagattcattgctaacagacaaaaagcatctcaaatttctagagctgtgctgcagtgaaccaacgaatgaagcatacactgtggaagatgttagcaatattggcaagatctttgaggagctaacccctccgcgcaatctggaagagctagttattttgggattctttggttggaggtaccctacatggctagatacaacccatttgtgttcactgaaactcctgaaactcgaggcgtgcagattctgcgagcaacttcctccactcgggcagctacccaacctggcatgcctacaaattgcgggtgcaaccactgtcaccaagattggacctgaatttcttggctttggggtgctgggtaatcttggatccacagaagatgtagttgcctttcccaaacttgaatacttgaccatcaggtgtctgcccaactgggacgaatggtcctttttcagcgaagaagaagaagaaaatgttgctgctgctgccgttgttgctcgtccaaggaagcagcggctgctgccatgcttgaatgtgttaatccttgaacactgccccaaactgaggggtctcccacgacagcttggaagggaggccgtaagcttgacggacctcattataagagaagcaaaatccacgaagatggtggaagacctcccattcctttctgattgtctttcgatcgaaggatgtgaagcccttgagagggtctccaacattccccaagtgagagagctgcatttacatggctgtccaaactttaagtgtgttgaggatgtgagcaatcttcagggattatgcgtggatgaatcaattaaagagatccctagtgttcttgggcttctagagaaaggctggtgtggagacgagctggatgttcacgtggttgttaatcctgaagacatgacgcactgtgcgcaggcatccattgtatcgaattaa
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| Protein seq | MEEAILVLGVKEELRELQRRMYQIQCFLNDVEQKRTEESSIRTPPAQVPSVKQKKTCQLVEPNLVGKEILQASTRLVELLLAHKEKKPYKIGILGTGGIGKTTLAQKIYNGHKVKETFSKRAWVCVSQTYSEDEILKEILNGFEVHQEQGETFGKLISKLAKAVEGTCFMIVLDDVWHHDVWTNLLRTPLNAAASGVIIVTSRHDTVPQVIGVDYVHRVKLMSKDLAWELLWKSMNINEEKEVQHLKDIGMEIVSKCGHLPLAIKVTASVLATKDRTERHWRKVINKSAWFMDKLPDNLRGALFLSYDELSRQLKQCFLYCVLFPEDSKMFRDDLIRCWVAEGFVEEQDGQLLEETAEEYYDELIHRNLLQPTCRCFDHHLVRMHTLLRQLAQHLSGDEIFCGDTKSLETKSLSKIQRVTIFTEKDYLVIPDVGKERTMRTRTLTIRDAKLPRVEDTIFKRFPHIRVLDLTGSKLQCIPSCIGDLIHLRLVDLDQTDISCLPESIGCLQNLQILNLQRCGALHSLPLAITKLRNLRRLGLNGTPINEVPKGIGKLKFLNDLEAFPIGRGSETANVQDGWILEELGPLSQLRQLHMIKLEGAAPPCSSRDSLLTDKKHLKFLELCCSEPTNEAYTVEDVSNIGKIFEELTPPRNLEELVILGFFGWRYPTWLDTTHLCSLKLLKLEACRFCEQLPPLGQLPNLACLQIAGATTVTKIGPEFLGFGVLGNLGSTEDVVAFPKLEYLTIRCLPNWDEWSFFSEEEEENVAAAAVVARPRKQRLLPCLNVLILEHCPKLRGLPRQLGREAVSLTDLIIREAKSTKMVEDLPFLSDCLSIEGCEALERVSNIPQVRELHLHGCPNFKCVEDVSNLQGLCVDESIKEIPSVLGLLEKGWCGDELDVHVVVNPEDMTHCAQASIVSN
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.099166 | 0.0 | 0.000000 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0676200 | SBH | 0.035527 | 0.072868 | 0.057889 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g45050 | SBH | 1.895145 | 2.270342 | 1.721375 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0676200 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0023710 | SBH | 0.0 | 1.508121 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0023790 | RBH | 0.392288 | 0.0 | 0.414043 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0023460 | SBH | 0.264463 | 0.721511 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0023110 | SBH | 0.005719 | 0.007574 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0023710 | SBH | 0.000000 | 0.469667 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0429900 | RBH | 0.5647775 | 0.113198 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0023960 | SBH | 0.470954 | 0.700124 | 2.179529 |
| Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0023740 | SBH | 0.024663 | 0.551611 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0023820 | SBH | 0.957821 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0023290 | SBH | 9.521927 | 30.964485 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0022990 | SBH | 1.870009 | 0.0 | 3.727034 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0023540 | RBH | 0.190865 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G023600 | RBH | 0.277830 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0023750 | SBH | 0.152510 | 4.768662 | 0.673288 |
