Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsN22_11G023600 | OGI:11080510 | 5/16 | N22 | OsN22RS2 | Gramene(+IsoSeq) | Chr11:29995393-29998704 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | TACTAAATCTTATTCAACTTTCTAGACATCTTAACACCCGTCGTCCATTCATTTCCAGGTGCAGATTAATTGCCTTGGTCGCCACAGCTTAGTCTTTCTGATGGCTAGCTTGCTAGATTCTCTGGTTAGATCATGTGCCCAAAAGCTGCAGGATGTCATTATGGAGGAGGCAATTCTGGTTCTAGGGGTAAAAGAAGAACTCCGAGAACTACAGCGAAGAATGTATCAAATACAATGCTTTCTTAATGATGTTGAGCAAAAGAGGACAGAGGAGTCATCTGTTAATAACTGGCTTCGTAATCTGAAAGATGCCATGCATAATGCTGATGATATTGTAGACTTGGCTAGGTTCGAAGGAAGCAAGCTACTAGCACAAAGTCCTTTGTTGCCATCTTCATCATCAAGAAACTTAACTGGATGTACTGGCCTTTCGATTTTCTCTTGCCTTCCTACTATTCGGCGGCACCATGAGATCGCTATCCGGATTAGAGACTTCAATGCTGAACTTGACAAGATTTTAAAGCTTGGTAAAACGCTTTTTAAGATTAGGACACCGCCTGCACAAGTTCCGAGTGTGAAGCAAAAGAAAACATGCCAACTTGTGGAACCTAATCTTGTAGGGAAGGAAATTTTACAGGCTTCCACACGATTGGTAGAACTGCTTCTTGCACACAAGGAAAAGAAGCCCTACAAGATTGGTATTCTTGGAACAGGAGGGATTGGAAAAACAACTCTAGCTCAAAAAATATATAATGGCCACAAAGTAAAAGAAACCTTTAGCAAGCGTGCTTGGGTTTGTGTATCTCAGACGTATTCTGAAGATGAAATTTTGAAAGAAATTCTAAATGGTTTTGAGGTACATCAAGAGCAGGGTGAAACTTTCGGAAAGCTCATAAGTAAGCTTGCTAAAGCCGTTGAAGGGACATGTTTCATGATTGTTTTGGATGATGTTTGGCATCATGATGTGTGGACTAATCTACTAAGGACTCCATTAAATGCTGCTGCTTATGGAGTAATTATAGTTACAAGTCGACATGACACAGTGCCACAGGTAATTGGGGTGGATTATGTGCATCGAGTTAAATTGATGTCAAAAGACCTAGCATGAGAGCTACTTTGGAAGAGTATGAACATTAATGAAGAGAAAGAAGTGCAACACCTAAAAGATATTGGGATGGAGATCGTTTCTAAATGTGGCCACCTTCCTCTCGCAATCAAAGTTACTGCTAGTGTTCTAGCAACTAAAGATAGAACTGAGAGGCATTGGAGAAAGGTTATAAACAAAAGTGCTTGGTTTATGGACAAGCTTCCTGATAATCTCAGAGGAGCTTTGTTTCTGAGTTATGACGAGCTATCACGGCAGCTGAAGCAATGTTTTCTCTATTGTGTGTTGTTTCCAGAAGATTCTAAAATGTTCCGTGATGATTTGATTAGGTGTTGGGTTGCTGAAGGTTTTGTGGAAGAACAAGATGGGCAACTTCTAGAAGAGACAGCCGAAGAATATTACGACGAGTTGATACATAGGAATCTCCTTCAACCAACATGTAGATGTTTTGACCATCATTTAGTAAGAATGCATACTCTTTTAAGACAGCTTGCTCAACATTTGTCAGGAGATGAAATTTTTTGTGGAGACACAAAATCACTGGAGACAAAATCTTTGTCGAAGATACAACGAGTTACAATATTTACTGAAAAAGATTATCTAGTAATCCCTGATGTAGGCAAGGAGCGGACTATGAGAACAAGGACTTTGACTATTAGTCATGCCAAGTTACCAAGAGTTGAAGACACAATCTTCAAAAGATTTCCACATATTCGAGTTCTGGATTTGACTGGTTCAAAATTACAGTGCATTCCAAGTTGCATTGGAGATTTGATCCATCTACGATTGGTTGATCTTGATCAGACTGACATATCTTGTCTCCCAGAATCCATTGGTTGTCTTCAAAACCTACAGATATTGAACTTGCAACGCTGTGGTGCCTTACATAGTCTTCCTTTGGCCATCACCAAATTGAGAAATCTAAGGCGGCTCGGTCTTAATGGTACACCAATAAATGAGGTTCCAAAAGGGATAGGCAAATTGAAATTCCTCAATGATTTAGAAGCATTTCCAATTGGTAGAGGAAGTGAGACTGCTAATGTTCAAGATGGCTGGATTCTGGAAGAATTGGGTCCTCTTTCACAGCTGCGGCAGCTCCATATGATCAAACTTGAGGGAGCGGCTCCTCCTTGCAGCAGCAGAGATTCATTGCTAACAGACAAAAAGCATCTCAAATTTCTAGAGCTGTGCTGCAGTGAACCAACGAATGAAGCATACACTGTGGAAGATGTTAGCAATATTGGCAAGATCTTTGAGGAGCTAACCCCTCCGCGCAATCTGGAAGAGCTAGTTATTTTGGGATTCTTTGGTTGGAGGTACCCTACATGGCTAGATACAACCCATTTGTGTTCACTGAAACTCCTGAAACTCGAGGCGTGCAGATTCTGCGAGCAACTTCCTCCACTCGGGCAGCTACCCAACCTGGCATGCCTACAAATTGCGGGTGCAACCACTGTCACCAAGATTGGACCTGAATTTCTTGGCTTTGGGGTGCTGGGTAATCTTGGATCTACAGAAGATGTAGTTGCCTTTCCCAAACTTGAATACTTGACCATCAGGTGTCTGCCCAACTGGGACGAATGGTCCTTTTTCAGCGAAGAAGAAGAAGAAAATGTTGCTGCTGCTGCCGTTGTTGCTCGTCCAAGGAAGCAGCGGCTGCTGCCATGCTTGAATGTGTTAATCCTTGAACACTGCCCCAAACTGAGGGGTCTCCCACGACAGCTTGGAAGGGAGGCCGTAAGCTTGACGGACCTTATTATAAGAGAAGCAAAATCCACGAAGATGGTGGAAGACCTCCCATTCCTTTCTGATTGTCTTTCGATCGAAGGATGTGAAGCCCTTGAGAGGGTCTCCAACATTCCCCAAGTGAGAGAGCTGCATTTACATGGCTGTCCAAACTTTAAGTGTGTTGAGGATGTGAGCAATCTTCAGGGATTATGCGTGGATGAATCAATTAAAAAGATCCCTAGTGTTCTTGGGCTTCTAGAGAAAGGCTGGTGTGGAGACGAGCTGGATGTTCACGTGGTGCGTAATCTTGAGAAACGAGGTATGCTACTATTATTACACGAACACATGCTTAATTAATTCGTGTGTGTCTGGAGTAGTTGGTTATATTATCTGAATTTCGCACCCCTTGAAGTCATCGGATTGTGCATTTCTTCCTTAGTTTCTACTCCTGGTGTACAGGCGTTGCTATCATCTCATAA
More
|
||||||||||
| CDS seq | ATGGCTAGCTTGCTAGATTCTCTGGTTAGATCATGTGCCCAAAAGCTGCAGGATGTCATTATGGAGGAGGCAATTCTGGTTCTAGGGGTAAAAGAAGAACTCCGAGAACTACAGCGAAGAATGTATCAAATACAATGCTTTCTTAATGATGTTGAGCAAAAGAGGACAGAGGAGTCATCTGTTAATAACTGGCTTCGTAATCTGAAAGATGCCATGCATAATGCTGATGATATTGTAGACTTGGCTAGGTTCGAAGGAAGCAAGCTACTAGCACAAAGTCCTTTGTTGCCATCTTCATCATCAAGAAACTTAACTGGATGTACTGGCCTTTCGATTTTCTCTTGCCTTCCTACTATTCGGCGGCACCATGAGATCGCTATCCGGATTAGAGACTTCAATGCTGAACTTGACAAGATTTTAAAGCTTGGTAAAACGCTTTTTAAGATTAGGACACCGCCTGCACAAGTTCCGAGTGTGAAGCAAAAGAAAACATGCCAACTTGTGGAACCTAATCTTGTAGGGAAGGAAATTTTACAGGCTTCCACACGATTGGTAGAACTGCTTCTTGCACACAAGGAAAAGAAGCCCTACAAGATTGGTATTCTTGGAACAGGAGGGATTGGAAAAACAACTCTAGCTCAAAAAATATATAATGGCCACAAAGTAAAAGAAACCTTTAGCAAGCGTGCTTGGGTTTGTGTATCTCAGACGTATTCTGAAGATGAAATTTTGAAAGAAATTCTAAATGGTTTTGAGGTACATCAAGAGCAGGGTGAAACTTTCGGAAAGCTCATAAGTAAGCTTGCTAAAGCCGTTGAAGGGACATGTTTCATGATTGTTTTGGATGATGTTTGGCATCATGATGTGTGGACTAATCTACTAAGGACTCCATTAAATGCTGCTGCTTATGGAGTAATTATAGTTACAAGTCGACATGACACAGTGCCACAGAGTATGAACATTAATGAAGAGAAAGAAGTGCAACACCTAAAAGATATTGGGATGGAGATCGTTTCTAAATGTGGCCACCTTCCTCTCGCAATCAAAGTTACTGCTAGTGTTCTAGCAACTAAAGATAGAACTGAGAGGCATTGGAGAAAGGTTATAAACAAAAGTGCTTGGTTTATGGACAAGCTTCCTGATAATCTCAGAGGAGCTTTGTTTCTGAGTTATGACGAGCTATCACGGCAGCTGAAGCAATGTTTTCTCTATTGTGTGTTGTTTCCAGAAGATTCTAAAATGTTCCGTGATGATTTGATTAGGTGTTGGGTTGCTGAAGGTTTTGTGGAAGAACAAGATGGGCAACTTCTAGAAGAGACAGCCGAAGAATATTACGACGAGTTGATACATAGGAATCTCCTTCAACCAACATGTAGATGTTTTGACCATCATTTAGTAAGAATGCATACTCTTTTAAGACAGCTTGCTCAACATTTGTCAGGAGATGAAATTTTTTGTGGAGACACAAAATCACTGGAGACAAAATCTTTGTCGAAGATACAACGAGTTACAATATTTACTGAAAAAGATTATCTAGTAATCCCTGATGTAGGCAAGGAGCGGACTATGAGAACAAGGACTTTGACTATTAGTCATGCCAAGTTACCAAGAGTTGAAGACACAATCTTCAAAAGATTTCCACATATTCGAGTTCTGGATTTGACTGGTTCAAAATTACAGTGCATTCCAAGTTGCATTGGAGATTTGATCCATCTACGATTGGTTGATCTTGATCAGACTGACATATCTTGTCTCCCAGAATCCATTGGTTGTCTTCAAAACCTACAGATATTGAACTTGCAACGCTGTGGTGCCTTACATAGTCTTCCTTTGGCCATCACCAAATTGAGAAATCTAAGGCGGCTCGGTCTTAATGGTACACCAATAAATGAGGTTCCAAAAGGGATAGGCAAATTGAAATTCCTCAATGATTTAGAAGCATTTCCAATTGGTAGAGGAAGTGAGACTGCTAATGTTCAAGATGGCTGGATTCTGGAAGAATTGGGTCCTCTTTCACAGCTGCGGCAGCTCCATATGATCAAACTTGAGGGAGCGGCTCCTCCTTGCAGCAGCAGAGATTCATTGCTAACAGACAAAAAGCATCTCAAATTTCTAGAGCTGTGCTGCAGTGAACCAACGAATGAAGCATACACTGTGGAAGATGTTAGCAATATTGGCAAGATCTTTGAGGAGCTAACCCCTCCGCGCAATCTGGAAGAGCTAGTTATTTTGGGATTCTTTGGTTGGAGGTACCCTACATGGCTAGATACAACCCATTTGTGTTCACTGAAACTCCTGAAACTCGAGGCGTGCAGATTCTGCGAGCAACTTCCTCCACTCGGGCAGCTACCCAACCTGGCATGCCTACAAATTGCGGGTGCAACCACTGTCACCAAGATTGGACCTGAATTTCTTGGCTTTGGGGTGCTGGGTAATCTTGGATCTACAGAAGATGTAGTTGCCTTTCCCAAACTTGAATACTTGACCATCAGGTGTCTGCCCAACTGGGACGAATGGTCCTTTTTCAGCGAAGAAGAAGAAGAAAATGTTGCTGCTGCTGCCGTTGTTGCTCGTCCAAGGAAGCAGCGGCTGCTGCCATGCTTGAATGTGTTAATCCTTGAACACTGCCCCAAACTGAGGGGTCTCCCACGACAGCTTGGAAGGGAGGCCGTAAGCTTGACGGACCTTATTATAAGAGAAGCAAAATCCACGAAGATGGTGGAAGACCTCCCATTCCTTTCTGATTGTCTTTCGATCGAAGGATGTGAAGCCCTTGAGAGGGTCTCCAACATTCCCCAAGTGAGAGAGCTGCATTTACATGGCTGTCCAAACTTTAAGTGTGTTGAGGATGTGAGCAATCTTCAGGGATTATGCGTGGATGAATCAATTAAAAAGATCCCTAGTGTTCTTGGGCTTCTAGAGAAAGGCTGGTGTGGAGACGAGCTGGATGTTCACGTGGTGCGTAATCTTGAGAAACGAGGCGTTGCTATCATCTCATAA
More
|
||||||||||
| Protein seq | MASLLDSLVRSCAQKLQDVIMEEAILVLGVKEELRELQRRMYQIQCFLNDVEQKRTEESSVNNWLRNLKDAMHNADDIVDLARFEGSKLLAQSPLLPSSSSRNLTGCTGLSIFSCLPTIRRHHEIAIRIRDFNAELDKILKLGKTLFKIRTPPAQVPSVKQKKTCQLVEPNLVGKEILQASTRLVELLLAHKEKKPYKIGILGTGGIGKTTLAQKIYNGHKVKETFSKRAWVCVSQTYSEDEILKEILNGFEVHQEQGETFGKLISKLAKAVEGTCFMIVLDDVWHHDVWTNLLRTPLNAAAYGVIIVTSRHDTVPQSMNINEEKEVQHLKDIGMEIVSKCGHLPLAIKVTASVLATKDRTERHWRKVINKSAWFMDKLPDNLRGALFLSYDELSRQLKQCFLYCVLFPEDSKMFRDDLIRCWVAEGFVEEQDGQLLEETAEEYYDELIHRNLLQPTCRCFDHHLVRMHTLLRQLAQHLSGDEIFCGDTKSLETKSLSKIQRVTIFTEKDYLVIPDVGKERTMRTRTLTISHAKLPRVEDTIFKRFPHIRVLDLTGSKLQCIPSCIGDLIHLRLVDLDQTDISCLPESIGCLQNLQILNLQRCGALHSLPLAITKLRNLRRLGLNGTPINEVPKGIGKLKFLNDLEAFPIGRGSETANVQDGWILEELGPLSQLRQLHMIKLEGAAPPCSSRDSLLTDKKHLKFLELCCSEPTNEAYTVEDVSNIGKIFEELTPPRNLEELVILGFFGWRYPTWLDTTHLCSLKLLKLEACRFCEQLPPLGQLPNLACLQIAGATTVTKIGPEFLGFGVLGNLGSTEDVVAFPKLEYLTIRCLPNWDEWSFFSEEEEENVAAAAVVARPRKQRLLPCLNVLILEHCPKLRGLPRQLGREAVSLTDLIIREAKSTKMVEDLPFLSDCLSIEGCEALERVSNIPQVRELHLHGCPNFKCVEDVSNLQGLCVDESIKKIPSVLGLLEKGWCGDELDVHVVRNLEKRGVAIIS |
||||||||||
| Function | Putative disease resistance protein RGA4 [UniProtKB/Swiss-Prot:Q7XA39] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsN22_11G023600 | OsN22_11G023600_01 | Chr11 | 29995393 | 29998704 | + | NAM | ||
| CDS seq | ATGGCTAGCTTGCTAGATTCTCTGGTTAGATCATGTGCCCAAAAGCTGCAGGATGTCATTATGGAGGAGGCAATTCTGGTTCTAGGGGTAAAAGAAGAACTCCGAGAACTACAGCGAAGAATGTATCAAATACAATGCTTTCTTAATGATGTTGAGCAAAAGAGGACAGAGGAGTCATCTGTTAATAACTGGCTTCGTAATCTGAAAGATGCCATGCATAATGCTGATGATATTGTAGACTTGGCTAGGTTCGAAGGAAGCAAGCTACTAGCACAAAGTCCTTTGTTGCCATCTTCATCATCAAGAAACTTAACTGGATGTACTGGCCTTTCGATTTTCTCTTGCCTTCCTACTATTCGGCGGCACCATGAGATCGCTATCCGGATTAGAGACTTCAATGCTGAACTTGACAAGATTTTAAAGCTTGGTAAAACGCTTTTTAAGATTAGGACACCGCCTGCACAAGTTCCGAGTGTGAAGCAAAAGAAAACATGCCAACTTGTGGAACCTAATCTTGTAGGGAAGGAAATTTTACAGGCTTCCACACGATTGGTAGAACTGCTTCTTGCACACAAGGAAAAGAAGCCCTACAAGATTGGTATTCTTGGAACAGGAGGGATTGGAAAAACAACTCTAGCTCAAAAAATATATAATGGCCACAAAGTAAAAGAAACCTTTAGCAAGCGTGCTTGGGTTTGTGTATCTCAGACGTATTCTGAAGATGAAATTTTGAAAGAAATTCTAAATGGTTTTGAGGTACATCAAGAGCAGGGTGAAACTTTCGGAAAGCTCATAAGTAAGCTTGCTAAAGCCGTTGAAGGGACATGTTTCATGATTGTTTTGGATGATGTTTGGCATCATGATGTGTGGACTAATCTACTAAGGACTCCATTAAATGCTGCTGCTTATGGAGTAATTATAGTTACAAGTCGACATGACACAGTGCCACAGAGTATGAACATTAATGAAGAGAAAGAAGTGCAACACCTAAAAGATATTGGGATGGAGATCGTTTCTAAATGTGGCCACCTTCCTCTCGCAATCAAAGTTACTGCTAGTGTTCTAGCAACTAAAGATAGAACTGAGAGGCATTGGAGAAAGGTTATAAACAAAAGTGCTTGGTTTATGGACAAGCTTCCTGATAATCTCAGAGGAGCTTTGTTTCTGAGTTATGACGAGCTATCACGGCAGCTGAAGCAATGTTTTCTCTATTGTGTGTTGTTTCCAGAAGATTCTAAAATGTTCCGTGATGATTTGATTAGGTGTTGGGTTGCTGAAGGTTTTGTGGAAGAACAAGATGGGCAACTTCTAGAAGAGACAGCCGAAGAATATTACGACGAGTTGATACATAGGAATCTCCTTCAACCAACATGTAGATGTTTTGACCATCATTTAGTAAGAATGCATACTCTTTTAAGACAGCTTGCTCAACATTTGTCAGGAGATGAAATTTTTTGTGGAGACACAAAATCACTGGAGACAAAATCTTTGTCGAAGATACAACGAGTTACAATATTTACTGAAAAAGATTATCTAGTAATCCCTGATGTAGGCAAGGAGCGGACTATGAGAACAAGGACTTTGACTATTAGTCATGCCAAGTTACCAAGAGTTGAAGACACAATCTTCAAAAGATTTCCACATATTCGAGTTCTGGATTTGACTGGTTCAAAATTACAGTGCATTCCAAGTTGCATTGGAGATTTGATCCATCTACGATTGGTTGATCTTGATCAGACTGACATATCTTGTCTCCCAGAATCCATTGGTTGTCTTCAAAACCTACAGATATTGAACTTGCAACGCTGTGGTGCCTTACATAGTCTTCCTTTGGCCATCACCAAATTGAGAAATCTAAGGCGGCTCGGTCTTAATGGTACACCAATAAATGAGGTTCCAAAAGGGATAGGCAAATTGAAATTCCTCAATGATTTAGAAGCATTTCCAATTGGTAGAGGAAGTGAGACTGCTAATGTTCAAGATGGCTGGATTCTGGAAGAATTGGGTCCTCTTTCACAGCTGCGGCAGCTCCATATGATCAAACTTGAGGGAGCGGCTCCTCCTTGCAGCAGCAGAGATTCATTGCTAACAGACAAAAAGCATCTCAAATTTCTAGAGCTGTGCTGCAGTGAACCAACGAATGAAGCATACACTGTGGAAGATGTTAGCAATATTGGCAAGATCTTTGAGGAGCTAACCCCTCCGCGCAATCTGGAAGAGCTAGTTATTTTGGGATTCTTTGGTTGGAGGTACCCTACATGGCTAGATACAACCCATTTGTGTTCACTGAAACTCCTGAAACTCGAGGCGTGCAGATTCTGCGAGCAACTTCCTCCACTCGGGCAGCTACCCAACCTGGCATGCCTACAAATTGCGGGTGCAACCACTGTCACCAAGATTGGACCTGAATTTCTTGGCTTTGGGGTGCTGGGTAATCTTGGATCTACAGAAGATGTAGTTGCCTTTCCCAAACTTGAATACTTGACCATCAGGTGTCTGCCCAACTGGGACGAATGGTCCTTTTTCAGCGAAGAAGAAGAAGAAAATGTTGCTGCTGCTGCCGTTGTTGCTCGTCCAAGGAAGCAGCGGCTGCTGCCATGCTTGAATGTGTTAATCCTTGAACACTGCCCCAAACTGAGGGGTCTCCCACGACAGCTTGGAAGGGAGGCCGTAAGCTTGACGGACCTTATTATAAGAGAAGCAAAATCCACGAAGATGGTGGAAGACCTCCCATTCCTTTCTGATTGTCTTTCGATCGAAGGATGTGAAGCCCTTGAGAGGGTCTCCAACATTCCCCAAGTGAGAGAGCTGCATTTACATGGCTGTCCAAACTTTAAGTGTGTTGAGGATGTGAGCAATCTTCAGGGATTATGCGTGGATGAATCAATTAAAAAGATCCCTAGTGTTCTTGGGCTTCTAGAGAAAGGCTGGTGTGGAGACGAGCTGGATGTTCACGTGGTGCGTAATCTTGAGAAACGAGGCGTTGCTATCATCTCATAA
More
|
|||||||
| Protein seq | MASLLDSLVRSCAQKLQDVIMEEAILVLGVKEELRELQRRMYQIQCFLNDVEQKRTEESSVNNWLRNLKDAMHNADDIVDLARFEGSKLLAQSPLLPSSSSRNLTGCTGLSIFSCLPTIRRHHEIAIRIRDFNAELDKILKLGKTLFKIRTPPAQVPSVKQKKTCQLVEPNLVGKEILQASTRLVELLLAHKEKKPYKIGILGTGGIGKTTLAQKIYNGHKVKETFSKRAWVCVSQTYSEDEILKEILNGFEVHQEQGETFGKLISKLAKAVEGTCFMIVLDDVWHHDVWTNLLRTPLNAAAYGVIIVTSRHDTVPQSMNINEEKEVQHLKDIGMEIVSKCGHLPLAIKVTASVLATKDRTERHWRKVINKSAWFMDKLPDNLRGALFLSYDELSRQLKQCFLYCVLFPEDSKMFRDDLIRCWVAEGFVEEQDGQLLEETAEEYYDELIHRNLLQPTCRCFDHHLVRMHTLLRQLAQHLSGDEIFCGDTKSLETKSLSKIQRVTIFTEKDYLVIPDVGKERTMRTRTLTISHAKLPRVEDTIFKRFPHIRVLDLTGSKLQCIPSCIGDLIHLRLVDLDQTDISCLPESIGCLQNLQILNLQRCGALHSLPLAITKLRNLRRLGLNGTPINEVPKGIGKLKFLNDLEAFPIGRGSETANVQDGWILEELGPLSQLRQLHMIKLEGAAPPCSSRDSLLTDKKHLKFLELCCSEPTNEAYTVEDVSNIGKIFEELTPPRNLEELVILGFFGWRYPTWLDTTHLCSLKLLKLEACRFCEQLPPLGQLPNLACLQIAGATTVTKIGPEFLGFGVLGNLGSTEDVVAFPKLEYLTIRCLPNWDEWSFFSEEEEENVAAAAVVARPRKQRLLPCLNVLILEHCPKLRGLPRQLGREAVSLTDLIIREAKSTKMVEDLPFLSDCLSIEGCEALERVSNIPQVRELHLHGCPNFKCVEDVSNLQGLCVDESIKKIPSVLGLLEKGWCGDELDVHVVRNLEKRGVAIIS
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.277830 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0676200 | SBH | 0.035527 | 0.072868 | 0.057889 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g45050 | SBH | 1.895145 | 2.270342 | 1.721375 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0676200 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0023760 | SBH | 0.0 | 0.0 | 0.000000 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0023790 | RBH | 0.392288 | 0.0 | 0.414043 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0023440 | RBH | 0.099166 | 0.0 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0023010 | SBH | 0.279679 | 0.317584 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0023710 | SBH | 0.000000 | 0.469667 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0429900 | RBH | 0.5647775 | 0.113198 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0024040 | SBH | 0.631033 | 1.936608 | 0.070722 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0430200 | SBH | 14.200319 | 23.9624835 | 0.1261395 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0023770 | SBH | 0.0 | 0.063418 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0023820 | SBH | 0.957821 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0023400 | SBH | 0.000000 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0022990 | SBH | 1.870009 | 0.0 | 3.727034 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0023540 | RBH | 0.190865 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G023320 | SBH | 0.129080 | 0.795419 | 0.599774 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
