Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsMH63_12G0088700 OGI:12016150 | 2/50 Minghui 63 | MH63RS3 | HZAU Chr12:5553189-5554259
Gene Symbol -
Mutant -
Stuctural Variations

NamRoo_MH63RS3_INS1216830,02428_MH63RS3_INS1215450,02428_MH63RS3_DEL1228690,Basmati1_MH63RS3_INV1208220,Basmati1_MH63RS3_INS1208950,Basmati1_MH63RS3_DEL1210940,Y58S_MH63RS3_OTH1204270,Y58S_MH63RS3_DEL1204140,Y58S_MH63RS3_INV1204220,Lemont_MH63RS3_INS1200570,128077_MH63RS3_INS1200470,128077_MH63RS3_INS1214380,127652_MH63RS3_INV1207000,127652_MH63RS3_OTH1207050,127652_MH63RS3_DEL1227570_1,S548_MH63RS3_OTH1202670,S548_MH63RS3_DEL1202550,S548_MH63RS3_INV1202620,S548_MH63RS3_DEL1206090,R9311_MH63RS3_OTH1203490,R9311_MH63RS3_DEL1203390,R9311_MH63RS3_INV1203450,R9311_MH63RS3_DEL1206400,R9311_MH63RS3_DEL1206490,CN1_MH63RS3_INV1202580,CN1_MH63RS3_OTH1202620,ZH11_MH63RS3_INS1200470,ZH11_MH63RS3_INS1215450,DG_MH63RS3_OTH1202790,DG_MH63RS3_INV1202750,DG_MH63RS3_DEL1204200,DHX2_MH63RS3_INS1200510,127518_MH63RS3_OTH1204330,127518_MH63RS3_DEL1204200,127518_MH63RS3_INV1204270,KY131_MH63RS3_INS1214930,KY131_MH63RS3_INS1215230,XL628S_MH63RS3_DEL1203170,IR64_MH63RS3_OTH1203660,IR64_MH63RS3_DEL1203560,IR64_MH63RS3_INV1203620,IR64_MH63RS3_DEL1206720,HZ_MH63RS3_OTH1203100,HZ_MH63RS3_DEL1203010,HZ_MH63RS3_INV1203070,125619_MH63RS3_INV1207020,125619_MH63RS3_OTH1207060,Tumba_MH63RS3_INV1203200,Tumba_MH63RS3_OTH1203240,Tumba_MH63RS3_DEL1206050,Kosh_MH63RS3_INS1215160,132424_MH63RS3_OTH1203430,132424_MH63RS3_DEL1203330,132424_MH63RS3_INV1203390,WSSM_MH63RS3_DEL1202630,WSSM_MH63RS3_INV1202690,WSSM_MH63RS3_OTH1202740,LK638S_MH63RS3_DEL1203130,R527_MH63RS3_OTH1202970,R527_MH63RS3_DEL1202860,R527_MH63RS3_INV1202920,R527_MH63RS3_DEL1205770,G8_MH63RS3_INV1203630,G8_MH63RS3_OTH1203670,G8_MH63RS3_DEL1206470,TM_MH63RS3_OTH1205410,TM_MH63RS3_DEL1205290,TM_MH63RS3_INV1205350,117534_MH63RS3_DEL1211180,117534_MH63RS3_INS1211350_1,J4155S_MH63RS3_OTH1203770,J4155S_MH63RS3_DEL1203680,J4155S_MH63RS3_INV1203740,ZS97RS3_MH63RS3_DEL1203310,132278_MH63RS3_INS1218530,II32_MH63RS3_OTH1203200,II32_MH63RS3_DEL1203080,II32_MH63RS3_INV1203140,II32_MH63RS3_DEL1206100,G46_MH63RS3_OTH1202420,G46_MH63RS3_INV1202380,G46_MH63RS3_TRA1204230,FS32_MH63RS3_OTH1203170,FS32_MH63RS3_DEL1203050,FS32_MH63RS3_INV1203110,J4155_MH63RS3_OTH1204350,J4155_MH63RS3_DEL1204230,J4155_MH63RS3_INV1204300,117425_MH63RS3_INV1208300,117425_MH63RS3_TRA1211060,YX1_MH63RS3_OTH1205080,YX1_MH63RS3_DEL1204960,YX1_MH63RS3_INV1205030,YX1_MH63RS3_DEL1207640,Azucena_MH63RS3_INS1217690,G630_MH63RS3_OTH1203260,G630_MH63RS3_DEL1203140,G630_MH63RS3_INV1203200,D62_MH63RS3_OTH1203560,D62_MH63RS3_DEL1203440,D62_MH63RS3_INV1203500,OglaRS2_MH63RS3_DEL1234410,OglaRS2_MH63RS3_DEL1243470,OglaRS2_MH63RS3_DEL1243550,Nipponbare_MH63RS3_DEL1209030,Nipponbare_MH63RS3_DEL1208290,127742_MH63RS3_OTH1203370,127742_MH63RS3_DEL1203260,127742_MH63RS3_INV1203320,127742_MH63RS3_DEL1206230,125827_MH63RS3_OTH1203810,125827_MH63RS3_DEL1203690,125827_MH63RS3_INV1203760,LJ_MH63RS3_TRA1241580,

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DNA seq

CTAATCGTTGATGGTTACGAACAGTAGCGCTCGTAGGTTAAACTCCTCCTGTTTGTCCTCATCCCACACGGGGACACCTTCCTTCTTCCACAACAGTTTAAGATCTTCGACCAGTGGTCTTAGGAATACATCGATGTCGTTACCAGGTTGCTTGGGGCCTTGAATAATAATCGGCATCATTATGTACTTCCTCTTCATGCATAGCCAAGGGGGGAGGTTGTAGATACACATCGTAACGGGCCAAGTGCTATGGCCGCTGCTCATCTCTCCAAAAGGATTCATGCCATCCGTACTTAAACCAAACCGTATGTTTCGTGCGTCCTTTCCAAAGTCTTTAAATTTTCTGTCGATGTTTCGCCACTGCGAACCATCTGCGGGGTGTCTCAGCATCCCGTCCTGTTGACGTTCTTCAGCATGCCAACGCATCATTCTAGCATTCCCCTTGTTCCTGAACAAACGCCTTAGCCGTGGTATTATAGGGAAATACCACATCACCTTAGCAGGAATTCTCTTCTTCGTTAGCTGCCCGTCAACCTCACCTGGATCATCTCGTCTAATCTTGTATCGTAGTGCTTTACAAACAGCGCATGCTTCTAGGTTCTCGTACTCCTCACCACGATATAGGATACAATCATTCGGACATGCGTGAATCTTCTGAACTTCCAGTCCTAGAGGGCAGACTATCTTCTTAGCCTCGTACGTTGTCTCGGGCAATTTGTTTCCCTCCGGAAGAATGTTCTTGACGAGTTTCAATAAATCGCCAAATGCCTTGTCACTACCACCATTTTTTGCCTTCCATTGCAAGAACTCCAGAGTGGTATCCAACTTTTTGTGCCCCTGCTCGCAACCTGGGAAAAACGACGTTCTGTGATCCTCTAACATCTTGTCCAATTTATGGGCCCCCTTTTCACTTTCGCAGTCCTCCTTGGCATCCTGCAACATCTGACCAAGATCATCTGCAACGTCGTTATAATCAGCATCTCTATCCTCCTCGCCCGTTTGATTTCCTTCAGATCCAGCGTACTGAGCAAAGTCTAGAATATTGTCGTCTTCCACTTCATCTTTTTCCAT

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CDS seq

MEKDEVEDDNILDFAQYAGSEGNQTGEEDRDADYNDVADDLGQMLQDAKEDCESEKGAHKLDKMLEDHRTSFFPGCEQGHKKLDTTLEFLQWKAKNGGSDKAFGDLLKLVKNILPEGNKLPETTYEAKKIVCPLGLEVQKIHACPNDCILYRGEEYENLEACAVCKALRYKIRRDDPGEVDGQLTKKRIPAKVMWYFPIIPRLRRLFRNKGNARMMRWHAEERQQDGMLRHPADGSQWRNIDRKFKDFGKDARNIRFGLSTDGMNPFGEMSSGHSTWPVTMCIYNLPPWLCMKRKYIMMPIIIQGPKQPGNDIDVFLRPLVEDLKLLWKKEGVPVWDEDKQEEFNLRALLFVTIND

Protein seq

MEKDEVEDDNILDFAQYAGSEGNQTGEEDRDADYNDVADDLGQMLQDAKEDCESEKGAHKLDKMLEDHRTSFFPGCEQGHKKLDTTLEFLQWKAKNGGSDKAFGDLLKLVKNILPEGNKLPETTYEAKKIVCPLGLEVQKIHACPNDCILYRGEEYENLEACAVCKALRYKIRRDDPGEVDGQLTKKRIPAKVMWYFPIIPRLRRLFRNKGNARMMRWHAEERQQDGMLRHPADGSQWRNIDRKFKDFGKDARNIRFGLSTDGMNPFGEMSSGHSTWPVTMCIYNLPPWLCMKRKYIMMPIIIQGPKQPGNDIDVFLRPLVEDLKLLWKKEGVPVWDEDKQEEFNLRALLFVTIND

Function -

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsMH63_12G0088700 OsMH63_12T0088700.1 Chr12 5553189 5554259 - maker
CDS seq

ATGGAAAAAGATGAAGTGGAAGACGACAATATTCTAGACTTTGCTCAGTACGCTGGATCTGAAGGAAATCAAACGGGCGAGGAGGATAGAGATGCTGATTATAACGACGTTGCAGATGATCTTGGTCAGATGTTGCAGGATGCCAAGGAGGACTGCGAAAGTGAAAAGGGGGCCCATAAATTGGACAAGATGTTAGAGGATCACAGAACGTCGTTTTTCCCAGGTTGCGAGCAGGGGCACAAAAAGTTGGATACCACTCTGGAGTTCTTGCAATGGAAGGCAAAAAATGGTGGTAGTGACAAGGCATTTGGCGATTTATTGAAACTCGTCAAGAACATTCTTCCGGAGGGAAACAAATTGCCCGAGACAACGTACGAGGCTAAGAAGATAGTCTGCCCTCTAGGACTGGAAGTTCAGAAGATTCACGCATGTCCGAATGATTGTATCCTATATCGTGGTGAGGAGTACGAGAACCTAGAAGCATGCGCTGTTTGTAAAGCACTACGATACAAGATTAGACGAGATGATCCAGGTGAGGTTGACGGGCAGCTAACGAAGAAGAGAATTCCTGCTAAGGTGATGTGGTATTTCCCTATAATACCACGGCTAAGGCGTTTGTTCAGGAACAAGGGGAATGCTAGAATGATGCGTTGGCATGCTGAAGAACGTCAACAGGACGGGATGCTGAGACACCCCGCAGATGGTTCGCAGTGGCGAAACATCGACAGAAAATTTAAAGACTTTGGAAAGGACGCACGAAACATACGGTTTGGTTTAAGTACGGATGGCATGAATCCTTTTGGAGAGATGAGCAGCGGCCATAGCACTTGGCCCGTTACGATGTGTATCTACAACCTCCCCCCTTGGCTATGCATGAAGAGGAAGTACATAATGATGCCGATTATTATTCAAGGCCCCAAGCAACCTGGTAACGACATCGATGTATTCCTAAGACCACTGGTCGAAGATCTTAAACTGTTGTGGAAGAAGGAAGGTGTCCCCGTGTGGGATGAGGACAAACAGGAGGAGTTTAACCTACGAGCGCTACTGTTCGTAACCATCAACGATTAG

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Protein seq

MEKDEVEDDNILDFAQYAGSEGNQTGEEDRDADYNDVADDLGQMLQDAKEDCESEKGAHKLDKMLEDHRTSFFPGCEQGHKKLDTTLEFLQWKAKNGGSDKAFGDLLKLVKNILPEGNKLPETTYEAKKIVCPLGLEVQKIHACPNDCILYRGEEYENLEACAVCKALRYKIRRDDPGEVDGQLTKKRIPAKVMWYFPIIPRLRRLFRNKGNARMMRWHAEERQQDGMLRHPADGSQWRNIDRKFKDFGKDARNIRFGLSTDGMNPFGEMSSGHSTWPVTMCIYNLPPWLCMKRKYIMMPIIIQGPKQPGNDIDVFLRPLVEDLKLLWKKEGVPVWDEDKQEEFNLRALLFVTIND

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0 0 0

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) NA NA NA NA NA
Nipponbare | IRGSP 1.0 | MSU LOC_Os12g12210 SBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | RAP-db NA NA NA NA NA
Azucena | AzucenaRS1 | Gramene(+IsoSeq) NA NA NA NA NA
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) NA NA NA NA NA
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) NA NA NA NA NA
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) NA NA NA NA NA
PR 106 | Os127742RS1 | Gramene(+IsoSeq) NA NA NA NA NA
Minghui 63 | MH63RS3 | HZAU OsMH63_10G0235200 SBH 0 0 0
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) NA NA NA NA NA
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_12G0094500 RBH 0 0 0
LIMA | Os127564RS1 | Gramene(+IsoSeq) NA NA NA NA NA
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) NA NA NA NA NA
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) NA NA NA NA NA
LIU XU | Os125827RS1 | Gramene(+IsoSeq) NA NA NA NA NA
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) NA NA NA NA NA
N22 | OsN22RS2 | Gramene(+IsoSeq) NA NA NA NA NA
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) NA NA NA NA NA
Os XI: R9311 | R9311 | AGIS R9311C04g14787 SBH None None None
Os XI-adm: HZ | HZ | PKU OsHZ_12g0083500 SBH None None None
Os XI-adm: J4155S | J4155S | PKU OsJ4155_12g0097900 SBH None None None
Os XI-adm: LK638S | LK638S | PKU OsLK638S_12g0066500 SBH None None None
Os XI-adm: XL628S | XL628S | PKU OsXL628S_12g0085700 SBH None None None
Os GJ-temp: 02428 | 02428 | SICAU Os02428G1020010100.01 SBH None None None
Os cB: Basmati1 | Basmati1 | SICAU OsBasmati1G1237573800.01 SBH None None None
Os O.glaberrima: Ogla | OglaRS2 | DIADE Oglab_031261 SBH None None None
Os XI-1A: CN1 | CN1 | SICAU OsCN1G1233813200.01 SBH None None None
Os XI-1A: D62 | D62 | SICAU OsD62G0413397100.01 SBH None None None
Os XI-1A: DG | DG | SICAU OsDGG1227102000.01 SBH None None None
Os GJ-temp: DHX2 | DHX2 | SICAU OsDHX2G1232614600.01 SBH None None None
Os XI-adm: FH838 | FH838 | SICAU OsFH838G1231594400.01 SBH None None None
Os XI-1A: FS32 | FS32 | SICAU OsFS32G0407521600.01 SBH None None None
Os XI-1A: G46 | G46 | SICAU OsG46G1222403800.01 SBH None None None
Os XI-adm: G630 | G630 | SICAU OsG630G1280003416.01 SBH None None None
Os XI-1B: G8 | G8 | SICAU OsG8G1280002902.01 SBH None None None
Os XI-1A: II32 | II32 | SICAU OsII32G1280002582.01 SBH None None None
Os XI-1B: J4155 | J4155 | SICAU OsJ4155G1280003289.01 SBH None None None
Os GJ-temp: Kosh | Kosh | SICAU OsKoshG1233576600.01 SBH None None None
Os GJ-temp: KY131 | KY131 | SICAU OsKY131G1219031100.01 SBH None None None
Os GJ-trp: Lemont | Lemont | SICAU NA NA NA NA NA
Os GJ-adm: LJ | LJ | SICAU OsLJG1224781600.01 SBH None None None
Os GJ-sbtrp: NamRoo | NamRoo | SICAU OsNamRooG1231807600.01 SBH None None None
Os XI-1B: R498 | R498 | SICAU OsR498G0509883200.01 SBH None None None
Os XI-1B: R527 | R527 | SICAU OsR527G1223358900.01 SBH None None None
Os XI-1B: S548 | S548 | SICAU OsS548G1280201987.01 SBH None None None
Os XI-2: TM | TM | SICAU TMG1280002602.01 SBH None None None
Os XI-3: Tumba | Tumba | SICAU NA NA NA NA NA
Os XI-adm: WSSM | WSSM | SICAU NA NA NA NA NA
Os XI-1B: Y3551 | Y3551 | SICAU OsY3551G1227238400.01 SBH None None None
Os XI-1B: Y58S | Y58S | SICAU OsY58SG1280002589.01 SBH None None None
Os XI-adm: YX1 | YX1 | SICAU OsYX1G0409869900.01 SBH None None None
Os GJ-temp: ZH11 | ZH11 | SICAU OsZH11G1230973000.01 SBH None None None
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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