Variation ID: Lemont_MH63RS3_INS1200570

Variant Type:
Ref Genome:
Query Genome:
Chromosome:
Ref Start:
Ref End:
INS
Os GJ-trp: Lemont | Lemont
Os XI-adm: Minghui 63 | MH63RS3
Chr12
428747
432181
SV Length:
Query Start:
Query End:
Allele sv Count:
3440 bp
5551132
5554571
61
Gene_id Chromosome Start End
OsMH63_12G0088600 Chr12 5551163 5553128
OsMH63_12G0088700 Chr12 5553188 5554259
SV_id Chromosome ref_start ref_end query_start query_end length
Lemont_117425_INS1200170 Chr12 428747 432181 7789249 7792691 3443
Lemont_117425_INS1200170_1 Chr12 428747 432181 7802950 7806381 3432
Lemont_125827_INS1200580 Chr12 428747 431232 5741833 5744323 2491
Lemont_127518_INS1200550 Chr12 428747 431232 5880764 5883254 2491
Lemont_127652_INS1200430 Chr12 428747 431236 5816211 5818699 2489
Lemont_127742_INS1200500 Chr12 428747 431232 5773984 5776474 2491
Lemont_127742_INS1200500_1 Chr12 428747 432181 7677654 7681086 3433
Lemont_132424_INS1200540 Chr12 428747 431232 5736889 5739379 2491
Lemont_Basmati1_INS1200180 Chr12 428747 432181 7667257 7670689 3433
Lemont_CN1_INS1200570 Chr12 428747 431236 5649359 5651852 2494
Lemont_D62_INS1200530 Chr12 428747 431232 5841904 5844394 2491
Lemont_DG_INS1200560 Chr12 428747 431232 5705887 5708377 2491
Lemont_DG_INS1200560_1 Chr12 428747 432181 7677735 7681178 3444
Lemont_DG_INS1200560_2 Chr12 428747 432181 7691449 7694881 3433
Lemont_FH838_INS1200570 Chr12 428747 432181 5547567 5551006 3440
Lemont_FS32_INS1200560 Chr12 428747 431232 5767082 5769572 2491
Lemont_G630_INS1200440 Chr12 428747 431232 5777435 5779925 2491
Lemont_G8_INS1200490 Chr12 428747 431236 5732964 5735457 2494
Lemont_G8_INS1200490_1 Chr12 428747 432181 7771296 7774739 3444
Lemont_G8_INS1200490_2 Chr12 428747 432181 7784950 7788382 3433
Lemont_HZ_INS1200500 Chr12 428747 431232 5759722 5762212 2491
Lemont_HZ_INS1200500_1 Chr12 428747 432181 7654108 7657551 3444
Lemont_HZ_INS1200500_2 Chr12 428747 432181 7667765 7671197 3433
Lemont_II32_INS1200500 Chr12 428747 431232 5762951 5765441 2491
Lemont_II32_INS1200500_1 Chr12 428747 432181 7651614 7655049 3436
Lemont_II32_INS1200500_2 Chr12 428747 432181 7665258 7668688 3431
Lemont_IR64_INS1200470 Chr12 428747 431232 5735183 5737673 2491
Lemont_IR64_INS1200470_1 Chr12 428747 432181 7629540 7632983 3444
Lemont_IR64_INS1200470_2 Chr12 428747 432181 7643197 7646629 3433
Lemont_J4155_INS1200540 Chr12 428747 431232 5906175 5908665 2491
Lemont_J4155S_INS1200550 Chr12 428747 431232 5907069 5909559 2491
Lemont_LK638S_INS1200510 Chr12 428747 432181 5600427 5603866 3440
Lemont_LK638S_INS1200510_1 Chr12 428747 432181 7524829 7528272 3444
Lemont_LK638S_INS1200510_2 Chr12 428747 432181 7538552 7541984 3433
Lemont_Nipponbare_INS1200190 Chr12 428747 432181 6112720 6116159 3440
Lemont_Nipponbare_INS1200190_1 Chr12 428747 432181 6277756 6281202 3447
Lemont_R498_INS1200550 Chr12 428747 432181 5562526 5565965 3440
Lemont_R527_INS1200490 Chr12 428747 431232 5708199 5710689 2491
Lemont_R527_INS1200490_1 Chr12 428747 432181 7546209 7549652 3444
Lemont_R527_INS1200490_2 Chr12 428747 432181 7559864 7563296 3433
Lemont_R9311_INS1200520 Chr12 428747 431232 5864163 5866653 2491
Lemont_R9311_INS1200520_1 Chr12 428747 432181 7766756 7770188 3433
Lemont_S548_INS1200510 Chr12 428747 431232 5707575 5710065 2491
Lemont_S548_INS1200510_1 Chr12 428747 432181 7774389 7777832 3444
Lemont_S548_INS1200510_2 Chr12 428747 432181 7788044 7791476 3433
Lemont_TM_INS1200540 Chr12 428747 431232 5736643 5739133 2491
Lemont_Tumba_INS1200510 Chr12 428747 431236 5708441 5710934 2494
Lemont_Tumba_INS1200510_1 Chr12 428747 432181 7794439 7797871 3433
Lemont_WSSM_INS1200570 Chr12 428747 431236 5694034 5696528 2495
Lemont_XL628S_INS1200550 Chr12 428747 432181 5592483 5595922 3440
Lemont_XL628S_INS1200550_1 Chr12 428747 432181 7516811 7520254 3444
Lemont_XL628S_INS1200550_2 Chr12 428747 432181 7530512 7533944 3433
Lemont_Y3551_INS1200580 Chr12 428747 432181 5547890 5551329 3440
Lemont_Y58S_INS1200510 Chr12 428747 431232 5901648 5904138 2491
Lemont_YX1_INS1200540 Chr12 428747 431232 6398009 6400499 2491
Lemont_YX1_INS1200540_1 Chr12 428747 432181 8227580 8231023 3444
Lemont_YX1_INS1200540_2 Chr12 428747 432181 8241277 8244709 3433
Lemont_ZS97RS3_INS1200590 Chr12 428747 432181 5569799 5573238 3440
Lemont_ZS97RS3_INS1200590_1 Chr12 428747 432181 7494147 7497590 3444
Lemont_ZS97RS3_INS1200590_2 Chr12 428747 432181 7507838 7511270 3433
Lemont_MH63RS3_INS1200570 Chr12 428747 432181 5551132 5554571 3440

>Lemont_MH63RS3_INS1200570
ATATTCAATACATCTAAAATAGTTTACAACAATTACGGCAATAGATCGGCGGTGACGGTTGTCCGCACGTACTTTCTCCTCACTGTTGTTCCTTCCTTGTGATCGCTACATGAGTAAGGGGTGTCTTCGTTTGATAGGAGGATGCTAGGGTCAACCGTCACCGTGAAAGGGGGTTGCCCATCAAACTGATCGTAATCCTCGTCAGTCTTGTCCTCTACTCCGATGATTTTTCTTTTGCCTGGGAGAACCACGTGGCGCTTCGGCTCGTCAGGCCCTTTGCCCTTCTTTCCTTTGCTAGACATGTCCTTCACATAAAAAACTTGCGTTACATCATTGGCAAGGACAAAAGGTTCGTCCGAGTATCTAACCTTGTTAAGGTCAACCGTTGTCATCCCACTATCATCAATCGTTACGCCTCCACCAGTCAACCTAACCCATTGGCACTGGAACAGAGGGACCTTGAGAGGTCCATATTCAAGTTTCCATATCTCCTCGATGGCACCGTAATACGTGCCAGTTGTACCATCGTGTCCCATGGCATCGATACGAACAGCACTGTTCTGGTTCGTGCTCTTCATGTCTTGGGCTCTTGTGTAGAATGTGTACCCATTGATCTCATATCCCTGGAATGTCGCGATCGAGCCAGATGGACCCCTCGCCAGGAAGGCCAATTGCTGGTTAATCGTCTCGTTACCCATGAGATGTTGTCGTAGCCATGCGGGGAAAGTATCAATGTGATGCCGTGTAATCCATGCATCGGACTTACCGATGTTTCTGGCGCGAACTAGAGCCAAGTGCTCCTCGATGTAAGGAGCCACCAATGAAGATTGTTGTAAAACCGTGAAATGGGCTTTACGGAATAAATTGTTGTCTACCGTCATTATTGCTTTCCTTCCGAGAGTCCCCTTTCCCCGTAGTCTCCCTTCATGGCGTGATTCAGGTACCCTGATTGGGCGAAGGTCTTCAATAAATTCTATGCAGAATTCAATGACCTCCTCTGTTCCATACCCCTTGGCGATGCTTGCCTCTGGACGAGCACGGTTACGAACATACTTCTTCAGAACGCCCATGTACCTCTCGAAAGGAAACATGTTGTGTAGAAACACAGGCCCGAGAATACCGATCTCTTTCACTAGGTGACAAAGCAGATGCGTCATTATATTGAAAAATGAAGGTGGAAATATCAACTCAAAGCTGACAAGACATTGCACCACATCATTCTGAAGAGCTTCTAACCTATCCAGATCGATGATCTTCTGCGAAATTGCGTTCATGAAAGAACATAGCTTTGTTATTGTTGCCCGGACATTGTCTGGGAGGATACCCCTTATTATAACTGGTAGCAGTTGTGTCATCAACACGTGACAGTCATGAGACTTTAGGTTTGTGAACTTCTTCTCCTTCGTGCTTATTATTCGCTTTATATTCGTGGAGTATCCAGATGGTACCTTGATGCTCTCCAAGCATTGAAACATACTTTCCTCCTCTCCCTTGCTAAGAGTGTAACTGGCTGGACTCAAGTAATGGATGCCTTTCTCCTTTGGTTCCGGGTGAAGGTCACCACGTTGTTCCATATGCTTCAGATCATTACGTGCTTCCAGTGTATCTTTCGACTTTCCATATACACCTAGGAAGCCAAGAAGGTTTACGCAAAGGTTCTTAGTGAGGTGCATTACGTCGATTGCGTGGTGGACGTCCAAGAATTCCCAATAGGGTAACTTCCAAAATATGGAGTTTTTTTTCCACATCGCCGCGTGACCATCTTCGCTCTCTATAGGCTGGCTGCCAGGCCCCTTTCCAAACACTACTTTAAGATCTTTAACCATAGCAAACATTGTTTTCCCGCTGCGATGTTTAGGCTTCGTACGGTGGTCCGCCATATGTTCAAAGTGCTTGCCTTTCTTCCGTACTGGGTGGTTTGCTACAAGGAATCGACGATGACCCATGTACACAACCTTCCTACAGTGCTTAAGATACGTACTTTCTGTTTCATCCATACAGCGAGTGCAAGCCTTGTACCCCTTGTTGGACTGCCCGGATAGGTTGTTAAGTGCAGGCTAATCGTTGATGGTTACGAACAGTAGCGCTCGTAGGTTAAACTCCTCCTGTTTGTCCTCATCCCACACGGGGACACCTTCCTTCTTCCACAACAGTTTAAGATCTTCGACCAGTGGTCTTAGGAATACATCGATGTCGTTACCAGGTTGCTTGGGGCCTTGAATAATAATCGGCATCATTATGTACTTCCTCTTCATGCATAGCCAAGGGGGGAGGTTGTAGATACACATCGTAACGGGCCAAGTGCTATGGCCGCTGCTCATCTCTCCAAAAGGATTCATGCCATCCGTACTTAAACCAAACCGTATGTTTCGTGCGTCCTTTCCAAAGTCTTTAAATTTTCTGTCGATGTTTCGCCACTGCGAACCATCTGCGGGGTGTCTCAGCATCCCGTCCTGTTGACGTTCTTCAGCATGCCAACGCATCATTCTAGCATTCCCCTTGTTCCTGAACAAACGCCTTAGCCGTGGTATTATAGGGAAATACCACATCACCTTAGCAGGAATTCTCTTCTTCGTTAGCTGCCCGTCAACCTCACCTGGATCATCTCGTCTAATCTTGTATCGTAGTGCTTTACAAACAGCGCATGCTTCTAGGTTCTCGTACTCCTCACCACGATATAGGATACAATCATTCGGACATGCGTGAATCTTCTGAACTTCCAGTCCTAGAGGGCAGACTATCTTCTTAGCCTCGTACGTTGTCTCGGGCAATTTGTTTCCCTCCGGAAGAATGTTCTTGACGAGTTTCAATAAATCGCCAAATGCCTTGTCACTACCACCATTTTTTGCCTTCCATTGCAAGAACTCCAGAGTGGTATCCAACTTTTTGTGCCCCTGCTCGCAACCTGGGAAAAACGACGTTCTGTGATCCTCTAACATCTTGTCCAATTTATGGGCCCCCTTTTCACTTTCGCAGTCCTCCTTGGCATCCTGCAACATCTGACCAAGATCATCTGCAACGTCGTTATAATCAGCATCTCTATCCTCCTCGCCCGTTTGATTTCCTTCAGATCCAGCGTACTGAGCAAAGTCTAGAATATTGTCGTCTTCCACTTCATCTTTTTCCATTTCAACCCCTTGCTCTCCGTGGGATGTCCAACAATTATAGCTTGGCATGAACCCCGACTCAAACAAGTGGAAATGAATAGTCCTGGATGCAGAATACTCCTTCTGATTCTTACACTTATTGCATGGACAACATTTAAAACCCTTCTGCTTTAGTTTTGGCCACTCTCAAGAAATAATGCACGCCATCAATAAACTCTTCGGACCACCGGTCAGCGTACATCCATTGCGGATCCATCTACATGAAATGAAAAAAAAATCATACACAAATAATCATTCGTACAATAATGGTAGTTATACAATAATGATAAAATA

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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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